RNA–Protein interactions for RNA: ENST00000621605.1

SYNRG-230, Transcript of synergin gamma, humanhuman

TSL 5

Gene SYNRG, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-230ENST00000621605 SMG6Q86US8 1419 aaKnown RBP-0.47□□□□□ -2.49
SYNRG-230ENST00000621605 PATJQ8NI35 1801 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 IFT140Q96RY7 1462 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 KIAA0556O60303 1618 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 SMG1Q96Q15 3661 aaKnown RBP-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 PIGBOS1A0A0B4J2F0 54 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 TRBV7-4A0A0J9YYF1 115 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 IGLC7A0M8Q6 106 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 F8VRH5 84 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 IFNGP01579 166 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 SMCO1Q147U7 214 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 C10orf113Q5VZT2 155 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 USMG5Q96IX5 58 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 LINC00846Q9NV44 126 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 LENEPQ9Y5L5 61 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 ARAP2Q8WZ64 1704 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 MARF1Q9Y4F3 1742 aaKnown RBP-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 BTAF1O14981 1849 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 PSME4Q14997 1843 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 SBF2Q86WG5 1849 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 MAGI1Q96QZ7 1491 aaPredicted RBP-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 DNAH10Q8IVF4 4471 aa-0.48□□□□□ -2.49
SYNRG-230ENST00000621605 SETBP1Q9Y6X0 1596 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 CICQ96RK0 1608 aaPredicted RBP-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 TET3O43151 1660 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 KIF21AQ7Z4S6 1674 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 ADGRG4Q8IZF6 3080 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 TRBV7-3A0A075B6L6 115 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 LOC100130705A0A1B0GUX0 176 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 CPSF4LA6NMK7 179 aaKnown RBP-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 HMGN4O00479 90 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 UQCR11O14957 56 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 IGLC1P0CG04 106 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 BTG2P78543 158 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 DR1Q01658 176 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 COX6B2Q6YFQ2 88 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 MYOZ3Q8TDC0 251 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 TCEAL4Q96EI5 215 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 LINC01600Q96MT4 127 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 NAA60Q9H7X0 242 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 CDC42SE2Q9NRR3 84 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 MYH8P13535 1937 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 NKTRP30414 1462 aaKnown RBP-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 ZNF518AQ6AHZ1 1483 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 CCDC141Q6ZP82 1450 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 MRC2Q9UBG0 1479 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 TRIOO75962 3097 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 ROBO1Q9Y6N7 1651 aa-0.49□□□□□ -2.49
SYNRG-230ENST00000621605 ITPR2Q14571 2701 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 DMXL2Q8TDJ6 3036 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 LOC105371267A0A1B0GV96 52 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 LOC285095A0A1B0GVY8 99 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 H0YAA0 97 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 K7EP34 96 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 CCL22O00626 93 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 APOC3P02656 99 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 MT1BP07438 61 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 WHAMMP3Q1A5X7 153 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 SMIM21Q3B7S5 101 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 MT1MQ8N339 61 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 ANP32BQ92688 251 aaKnown RBP-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 FAM167A-AS1Q96KT0 104 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 PFDN5Q99471 154 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 SPANXDQ9BXN6 97 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 ANKRD30AQ9BXX3 1397 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 NCOA3Q9Y6Q9 1424 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 ADGRL2O95490 1459 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 POLA1P09884 1462 aaPredicted RBP-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 NLRP1Q9C000 1473 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 MAP3K1Q13233 1512 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 ARHGEF12Q9NZN5 1544 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 SHROOM2Q13796 1616 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 A0A0G2JMZ2 1700 aa-0.5□□□□□ -2.49
SYNRG-230ENST00000621605 H0YGG7 62 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 H3BNG1 76 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 SSSCA1O60232 199 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 SFT2D2O95562 160 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 MT2AP02795 61 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 MGPP08493 103 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 CLIP1P30622 1438 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 MYOM1P52179 1685 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 DEFB1P60022 68 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 COL14A1Q05707 1796 aaKnown RBP-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 ATMQ13315 3056 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 C1orf167Q5SNV9 1468 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 EYSQ5T1H1 3165 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 FOCADQ5VW36 1801 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 MRPL54Q6P161 138 aaKnown RBP-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 PPIP5K1Q6PFW1 1433 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 KRTAP8-1Q8IUC2 63 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 FAM223AQ8IWN6 122 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 FDCSPQ8NFU4 85 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 DOCK2Q92608 1830 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 KIAA1551Q9HCM1 1747 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 CDKN2A-AS1Q9UH64 79 aa-0.51□□□□□ -2.49
SYNRG-230ENST00000621605 NWD2Q9ULI1 1742 aa-0.52□□□□□ -2.49
SYNRG-230ENST00000621605 PLEKHH2Q8IVE3 1493 aa-0.52□□□□□ -2.49
SYNRG-230ENST00000621605 MBD5Q9P267 1494 aa-0.52□□□□□ -2.49
SYNRG-230ENST00000621605 FHAD1B1AJZ9 1412 aa-0.52□□□□□ -2.49
SYNRG-230ENST00000621605 EDC4Q6P2E9 1401 aaKnown RBP-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms