RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 COX6A2Q02221 97 aa7.02□□□□□ -1.29
CLTCL1-211ENST00000621271 POLQO75417 2590 aa7.02□□□□□ -1.29
CLTCL1-211ENST00000621271 KRTAP24-1Q3LI83 254 aa7.01□□□□□ -1.29
CLTCL1-211ENST00000621271 LYPD5Q6UWN5 251 aa7.01□□□□□ -1.29
CLTCL1-211ENST00000621271 MTORP42345 2549 aa7.01□□□□□ -1.29
CLTCL1-211ENST00000621271 TANC2Q9HCD6 1990 aa7.01□□□□□ -1.29
CLTCL1-211ENST00000621271 A0A096LNJ9 63 aa7.01□□□□□ -1.29
CLTCL1-211ENST00000621271 FAM236DA0A1B0GTK5 79 aa7.01□□□□□ -1.29
CLTCL1-211ENST00000621271 FAM236CP0DP71 79 aa7.01□□□□□ -1.29
CLTCL1-211ENST00000621271 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.01□□□□□ -1.29
CLTCL1-211ENST00000621271 SERP2Q8N6R1 65 aa7□□□□□ -1.29
CLTCL1-211ENST00000621271 FAM240AA0A1B0GVK7 77 aa6.99□□□□□ -1.29
CLTCL1-211ENST00000621271 IGIPA6NJ69 53 aa6.99□□□□□ -1.29
CLTCL1-211ENST00000621271 F8WDY8 70 aa6.99□□□□□ -1.29
CLTCL1-211ENST00000621271 COX7CP15954 63 aa6.99□□□□□ -1.29
CLTCL1-211ENST00000621271 ENHOQ6UWT2 76 aa6.99□□□□□ -1.29
CLTCL1-211ENST00000621271 POM121L12Q8N7R1 296 aa6.99□□□□□ -1.29
CLTCL1-211ENST00000621271 LINC00337Q8N6G1 96 aa6.98□□□□□ -1.29
CLTCL1-211ENST00000621271 Q8N9L7 120 aa6.98□□□□□ -1.29
CLTCL1-211ENST00000621271 LINC00242Q5T6M2 205 aa6.98□□□□□ -1.29
CLTCL1-211ENST00000621271 SERP1Q9Y6X1 66 aa6.98□□□□□ -1.29
CLTCL1-211ENST00000621271 LRP4O75096 1905 aa6.98□□□□□ -1.29
CLTCL1-211ENST00000621271 FAM229AH3BQW9 127 aa6.98□□□□□ -1.29
CLTCL1-211ENST00000621271 COX8CQ7Z4L0 72 aa6.98□□□□□ -1.29
CLTCL1-211ENST00000621271 IGLV4-60A0A075B6I1 120 aa6.97□□□□□ -1.29
CLTCL1-211ENST00000621271 Q6ZVQ6 151 aa6.97□□□□□ -1.29
CLTCL1-211ENST00000621271 SMIM11BQ8TCY0 68 aa6.97□□□□□ -1.29
CLTCL1-211ENST00000621271 C9orf116Q5BN46 136 aaPredicted RBP6.97□□□□□ -1.29
CLTCL1-211ENST00000621271 PRR15LQ9BU68 103 aa6.97□□□□□ -1.29
CLTCL1-211ENST00000621271 CPAMD8Q8IZJ3 1885 aa6.97□□□□□ -1.29
CLTCL1-211ENST00000621271 NDUFC2-KCTD14E9PQ53 114 aa6.97□□□□□ -1.29
CLTCL1-211ENST00000621271 Q8N2B8 174 aa6.97□□□□□ -1.29
CLTCL1-211ENST00000621271 C2orf48Q96LS8 159 aa6.97□□□□□ -1.29
CLTCL1-211ENST00000621271 CENPFP49454 3210 aa6.96□□□□□ -1.29
CLTCL1-211ENST00000621271 WDR87Q6ZQQ6 2873 aa6.96□□□□□ -1.29
CLTCL1-211ENST00000621271 TRBV10-3A0A0K0K1G6 114 aa6.96□□□□□ -1.3
CLTCL1-211ENST00000621271 WWC2-AS2Q96NR7 200 aa6.96□□□□□ -1.3
CLTCL1-211ENST00000621271 Q6JHZ5 121 aa6.95□□□□□ -1.3
CLTCL1-211ENST00000621271 LIMD2Q9BT23 127 aa6.95□□□□□ -1.3
CLTCL1-211ENST00000621271 BEAN1Q3B7T3 259 aa6.94□□□□□ -1.3
CLTCL1-211ENST00000621271 V9GYY9 64 aa6.94□□□□□ -1.3
CLTCL1-211ENST00000621271 A0A1B0GUV1 79 aa6.94□□□□□ -1.3
CLTCL1-211ENST00000621271 ADAMTS20P59510 1910 aa6.94□□□□□ -1.3
CLTCL1-211ENST00000621271 SMIM1B2RUZ4 78 aa6.93□□□□□ -1.3
CLTCL1-211ENST00000621271 LINC00694P0DN24 101 aa6.93□□□□□ -1.3
CLTCL1-211ENST00000621271 Q9BRP9 147 aa6.93□□□□□ -1.3
CLTCL1-211ENST00000621271 ESRGQ1W209 222 aa6.93□□□□□ -1.3
CLTCL1-211ENST00000621271 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
CLTCL1-211ENST00000621271 TSPEAR-AS2P59090 65 aa6.92□□□□□ -1.3
CLTCL1-211ENST00000621271 MPLKIPQ8TAP9 179 aa6.92□□□□□ -1.3
CLTCL1-211ENST00000621271 CSDC2Q9Y534 153 aaKnown RBP6.92□□□□□ -1.3
CLTCL1-211ENST00000621271 HTTP42858 3142 aa6.92□□□□□ -1.3
CLTCL1-211ENST00000621271 IGHV6-1A0A0B4J1U7 121 aa6.92□□□□□ -1.3
CLTCL1-211ENST00000621271 C16orf90A8MZG2 172 aa6.92□□□□□ -1.3
CLTCL1-211ENST00000621271 SBSPONQ8IVN8 264 aa6.92□□□□□ -1.3
CLTCL1-211ENST00000621271 CELA1Q9UNI1 258 aa6.92□□□□□ -1.3
CLTCL1-211ENST00000621271 RAI1Q7Z5J4 1906 aaPredicted RBP6.92□□□□□ -1.3
CLTCL1-211ENST00000621271 NDUFC1O43677 76 aa6.92□□□□□ -1.3
CLTCL1-211ENST00000621271 ATP5EP56381 51 aaPredicted RBP6.91□□□□□ -1.3
CLTCL1-211ENST00000621271 PRYO14603 147 aa6.91□□□□□ -1.3
CLTCL1-211ENST00000621271 EXPH5Q8NEV8 1989 aa6.9□□□□□ -1.3
CLTCL1-211ENST00000621271 CDIP1Q9H305 208 aa6.9□□□□□ -1.31
CLTCL1-211ENST00000621271 X6R8D5 127 aa6.9□□□□□ -1.31
CLTCL1-211ENST00000621271 PTPRBP23467 1997 aa6.9□□□□□ -1.31
CLTCL1-211ENST00000621271 F8P00451 2351 aa6.89□□□□□ -1.31
CLTCL1-211ENST00000621271 J3QL48 77 aa6.89□□□□□ -1.31
CLTCL1-211ENST00000621271 NTM-AS1Q6ZSK4 140 aa6.89□□□□□ -1.31
CLTCL1-211ENST00000621271 Q6ZRU5 148 aa6.89□□□□□ -1.31
CLTCL1-211ENST00000621271 PCNTO95613 3336 aa6.88□□□□□ -1.31
CLTCL1-211ENST00000621271 PRR3P79522 188 aaKnown RBP6.88□□□□□ -1.31
CLTCL1-211ENST00000621271 Q6ZSN1 163 aa6.88□□□□□ -1.31
CLTCL1-211ENST00000621271 CHD9Q3L8U1 2897 aa6.87□□□□□ -1.31
CLTCL1-211ENST00000621271 LINC01546A6NGU7 62 aa6.87□□□□□ -1.31
CLTCL1-211ENST00000621271 PRLHP81277 87 aa6.87□□□□□ -1.31
CLTCL1-211ENST00000621271 RANBP2P49792 3224 aaKnown RBP6.87□□□□□ -1.31
CLTCL1-211ENST00000621271 ACANP16112 2415 aa6.87□□□□□ -1.31
CLTCL1-211ENST00000621271 RETNLBQ9BQ08 111 aa6.87□□□□□ -1.31
CLTCL1-211ENST00000621271 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
CLTCL1-211ENST00000621271 ZNF292O60281 2723 aa6.87□□□□□ -1.31
CLTCL1-211ENST00000621271 ADAMTSL4-AS1Q5T5F5 129 aa6.86□□□□□ -1.31
CLTCL1-211ENST00000621271 HECTD1Q9ULT8 2610 aa6.86□□□□□ -1.31
CLTCL1-211ENST00000621271 LINC01561Q8N1V8 128 aa6.86□□□□□ -1.31
CLTCL1-211ENST00000621271 Q8N814 137 aa6.86□□□□□ -1.31
CLTCL1-211ENST00000621271 AMELXQ99217 191 aa6.86□□□□□ -1.31
CLTCL1-211ENST00000621271 A0A0U1RQV1 116 aa6.86□□□□□ -1.31
CLTCL1-211ENST00000621271 C22orf24Q9Y442 160 aa6.86□□□□□ -1.31
CLTCL1-211ENST00000621271 A0A087WSZ3 146 aa6.86□□□□□ -1.31
CLTCL1-211ENST00000621271 NBDYA0A0U1RRE5 68 aa6.86□□□□□ -1.31
CLTCL1-211ENST00000621271 A6NED7 52 aa6.86□□□□□ -1.31
CLTCL1-211ENST00000621271 CHD7Q9P2D1 2997 aa6.85□□□□□ -1.31
CLTCL1-211ENST00000621271 H3BNG1 76 aa6.85□□□□□ -1.31
CLTCL1-211ENST00000621271 LINC00315P59091 139 aa6.85□□□□□ -1.31
CLTCL1-211ENST00000621271 PRR4Q16378 134 aa6.84□□□□□ -1.31
CLTCL1-211ENST00000621271 PLA2G1BP04054 148 aaKnown RBP6.84□□□□□ -1.31
CLTCL1-211ENST00000621271 HELZ2Q9BYK8 2649 aaKnown RBP6.84□□□□□ -1.31
CLTCL1-211ENST00000621271 FAM30AQ9NZY2 134 aa6.84□□□□□ -1.31
CLTCL1-211ENST00000621271 SMIM26A0A096LP01 95 aa6.83□□□□□ -1.32
CLTCL1-211ENST00000621271 RTL8CO15255 209 aa6.83□□□□□ -1.32
CLTCL1-211ENST00000621271 SMCR5Q8TEV8 140 aa6.83□□□□□ -1.32
CLTCL1-211ENST00000621271 SPACA4Q8TDM5 124 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 301.5 ms