RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 Q8N7P7 452 aa5.25□□□□□ -1.57
COLCA1-205ENST00000620864 IGKV2-28A0A075B6P5 120 aa5.25□□□□□ -1.57
COLCA1-205ENST00000620864 IGKV2D-28P01615 120 aa5.25□□□□□ -1.57
COLCA1-205ENST00000620864 DEFB114Q30KQ6 69 aa5.25□□□□□ -1.57
COLCA1-205ENST00000620864 DCANP1Q8TF63 244 aa5.25□□□□□ -1.57
COLCA1-205ENST00000620864 IGIPA6NJ69 53 aa5.25□□□□□ -1.57
COLCA1-205ENST00000620864 KLLNB2CW77 178 aa5.25□□□□□ -1.57
COLCA1-205ENST00000620864 PRM2P04554 102 aa5.24□□□□□ -1.57
COLCA1-205ENST00000620864 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
COLCA1-205ENST00000620864 E7EUB6 86 aa5.24□□□□□ -1.57
COLCA1-205ENST00000620864 CRIP1P50238 77 aa5.24□□□□□ -1.57
COLCA1-205ENST00000620864 CDC42SE2Q9NRR3 84 aa5.24□□□□□ -1.57
COLCA1-205ENST00000620864 CD164Q04900 197 aa5.24□□□□□ -1.57
COLCA1-205ENST00000620864 Q6ZS46 218 aa5.24□□□□□ -1.57
COLCA1-205ENST00000620864 X6R8D5 127 aa5.23□□□□□ -1.57
COLCA1-205ENST00000620864 TET2Q6N021 2002 aaPredicted RBP5.23□□□□□ -1.57
COLCA1-205ENST00000620864 PTPRBP23467 1997 aa5.23□□□□□ -1.57
COLCA1-205ENST00000620864 IGLV9-49A0A0B4J1Y8 123 aa5.22□□□□□ -1.57
COLCA1-205ENST00000620864 RPL37AP8A6NKH3 93 aa5.22□□□□□ -1.57
COLCA1-205ENST00000620864 LINC00575Q6W349 94 aa5.22□□□□□ -1.57
COLCA1-205ENST00000620864 Q6YL49 198 aa5.22□□□□□ -1.57
COLCA1-205ENST00000620864 ZFYVE26Q68DK2 2539 aa5.22□□□□□ -1.57
COLCA1-205ENST00000620864 RNASE3P12724 160 aaKnown RBP5.22□□□□□ -1.57
COLCA1-205ENST00000620864 C1orf64Q8NEQ6 169 aa5.22□□□□□ -1.57
COLCA1-205ENST00000620864 A0A087WVE0 104 aa5.22□□□□□ -1.57
COLCA1-205ENST00000620864 Q6ZTC4 211 aa5.22□□□□□ -1.57
COLCA1-205ENST00000620864 LOC100131303A0A0U1RQF7 123 aa5.21□□□□□ -1.57
COLCA1-205ENST00000620864 F8P00451 2351 aa5.21□□□□□ -1.58
COLCA1-205ENST00000620864 ZNF295-AS1Q8N0V1 137 aa5.21□□□□□ -1.58
COLCA1-205ENST00000620864 PKD1L2Q7Z442 2459 aa5.21□□□□□ -1.58
COLCA1-205ENST00000620864 DEFB1P60022 68 aa5.2□□□□□ -1.58
COLCA1-205ENST00000620864 IGHV6-1A0A0B4J1U7 121 aa5.2□□□□□ -1.58
COLCA1-205ENST00000620864 SMIM1B2RUZ4 78 aa5.2□□□□□ -1.58
COLCA1-205ENST00000620864 ERC2-IT1O76042 136 aa5.2□□□□□ -1.58
COLCA1-205ENST00000620864 C2orf48Q96LS8 159 aa5.2□□□□□ -1.58
COLCA1-205ENST00000620864 A0A087WYN8 130 aa5.2□□□□□ -1.58
COLCA1-205ENST00000620864 CYSRT1A8MQ03 144 aa5.2□□□□□ -1.58
COLCA1-205ENST00000620864 CDIP1Q9H305 208 aa5.2□□□□□ -1.58
COLCA1-205ENST00000620864 LINC00242Q5T6M2 205 aa5.19□□□□□ -1.58
COLCA1-205ENST00000620864 AMELXQ99217 191 aa5.19□□□□□ -1.58
COLCA1-205ENST00000620864 KPRPQ5T749 579 aaPredicted RBP5.19□□□□□ -1.58
COLCA1-205ENST00000620864 Q6ZSV7 163 aa5.19□□□□□ -1.58
COLCA1-205ENST00000620864 COX8CQ7Z4L0 72 aa5.19□□□□□ -1.58
COLCA1-205ENST00000620864 CIRBP-AS1Q8TBR5 109 aa5.19□□□□□ -1.58
COLCA1-205ENST00000620864 MYO9AB2RTY4 2548 aa5.19□□□□□ -1.58
COLCA1-205ENST00000620864 PSMG3-AS1Q96PY0 264 aa5.19□□□□□ -1.58
COLCA1-205ENST00000620864 PCOTHQ58A44 107 aa5.18□□□□□ -1.58
COLCA1-205ENST00000620864 Q8N2B8 174 aa5.18□□□□□ -1.58
COLCA1-205ENST00000620864 LMO4P61968 165 aa5.18□□□□□ -1.58
COLCA1-205ENST00000620864 LRRK2Q5S007 2527 aa5.18□□□□□ -1.58
COLCA1-205ENST00000620864 Q9BRP9 147 aa5.18□□□□□ -1.58
COLCA1-205ENST00000620864 Q9UF83 564 aa5.18□□□□□ -1.58
COLCA1-205ENST00000620864 CDSNQ15517 529 aa5.17□□□□□ -1.58
COLCA1-205ENST00000620864 Q5VSD8 79 aa5.17□□□□□ -1.58
COLCA1-205ENST00000620864 JMJD1CQ15652 2540 aa5.17□□□□□ -1.58
COLCA1-205ENST00000620864 A0A1B0GUV1 79 aa5.17□□□□□ -1.58
COLCA1-205ENST00000620864 ATP11AUNQ6ZP68 121 aa5.17□□□□□ -1.58
COLCA1-205ENST00000620864 CRIP2P52943 208 aaPredicted RBP5.17□□□□□ -1.58
COLCA1-205ENST00000620864 BRWD1-AS2P59051 145 aa5.16□□□□□ -1.58
COLCA1-205ENST00000620864 FN1P02751 2386 aaKnown RBP5.16□□□□□ -1.58
COLCA1-205ENST00000620864 PTPRSQ13332 1948 aa5.16□□□□□ -1.58
COLCA1-205ENST00000620864 C7orf65Q6ZTY9 151 aa5.16□□□□□ -1.58
COLCA1-205ENST00000620864 C6orf48Q9UBA6 75 aa5.16□□□□□ -1.58
COLCA1-205ENST00000620864 ANKHD1Q8IWZ3 2542 aaKnown RBP5.16□□□□□ -1.58
COLCA1-205ENST00000620864 PCNX3Q9H6A9 2034 aa5.15□□□□□ -1.58
COLCA1-205ENST00000620864 Q6ZSN1 163 aa5.15□□□□□ -1.58
COLCA1-205ENST00000620864 LINC01006Q8NI28 216 aa5.15□□□□□ -1.58
COLCA1-205ENST00000620864 NAV2Q8IVL1 2488 aa5.15□□□□□ -1.59
COLCA1-205ENST00000620864 LOC110117498A0A087WWA1 95 aa5.15□□□□□ -1.59
COLCA1-205ENST00000620864 PLA2G2DQ9UNK4 145 aa5.15□□□□□ -1.59
COLCA1-205ENST00000620864 A0A087WSZ3 146 aa5.14□□□□□ -1.59
COLCA1-205ENST00000620864 LINC01546A6NGU7 62 aa5.14□□□□□ -1.59
COLCA1-205ENST00000620864 LINC00310P59036 64 aa5.14□□□□□ -1.59
COLCA1-205ENST00000620864 LINC00336Q6ZUF6 198 aa5.13□□□□□ -1.59
COLCA1-205ENST00000620864 C11orf72Q8NBR9 251 aa5.13□□□□□ -1.59
COLCA1-205ENST00000620864 SBSPONQ8IVN8 264 aa5.13□□□□□ -1.59
COLCA1-205ENST00000620864 LRP4O75096 1905 aa5.13□□□□□ -1.59
COLCA1-205ENST00000620864 BRI3O95415 125 aa5.13□□□□□ -1.59
COLCA1-205ENST00000620864 SPINK1P00995 79 aa5.13□□□□□ -1.59
COLCA1-205ENST00000620864 PROK1P58294 105 aa5.13□□□□□ -1.59
COLCA1-205ENST00000620864 C11orf71Q6IPW1 123 aa5.13□□□□□ -1.59
COLCA1-205ENST00000620864 ELOF1P60002 83 aaKnown RBP5.12□□□□□ -1.59
COLCA1-205ENST00000620864 UNQ6190/PRO20217Q6UXQ8 127 aa5.12□□□□□ -1.59
COLCA1-205ENST00000620864 TRAV22A0A0B4J277 110 aa5.12□□□□□ -1.59
COLCA1-205ENST00000620864 ADAMTSL4-AS1Q5T5F5 129 aa5.12□□□□□ -1.59
COLCA1-205ENST00000620864 SMIM29Q86T20 159 aa5.12□□□□□ -1.59
COLCA1-205ENST00000620864 FAM19A4Q96LR4 140 aa5.12□□□□□ -1.59
COLCA1-205ENST00000620864 URB1-AS1Q96HZ7 61 aa5.12□□□□□ -1.59
COLCA1-205ENST00000620864 ABCA12Q86UK0 2595 aa5.12□□□□□ -1.59
COLCA1-205ENST00000620864 LOC101927531A0A1B0GV80 90 aa5.11□□□□□ -1.59
COLCA1-205ENST00000620864 ZNF580Q9UK33 172 aa5.11□□□□□ -1.59
COLCA1-205ENST00000620864 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
COLCA1-205ENST00000620864 C11orf21Q9P2W6 132 aa5.11□□□□□ -1.59
COLCA1-205ENST00000620864 TSPEAR-AS2P59090 65 aa5.11□□□□□ -1.59
COLCA1-205ENST00000620864 UQCR11O14957 56 aa5.11□□□□□ -1.59
COLCA1-205ENST00000620864 IGLV1-40P01703 118 aa5.11□□□□□ -1.59
COLCA1-205ENST00000620864 LCA10Q71F78 164 aa5.11□□□□□ -1.59
COLCA1-205ENST00000620864 LINC01556Q5JQF7 62 aa5.1□□□□□ -1.59
COLCA1-205ENST00000620864 PRR9Q5T870 116 aa5.1□□□□□ -1.59
COLCA1-205ENST00000620864 TLN1Q9Y490 2541 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms