RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SCXQ7RTU7 201 aa9.94□□□□□ -0.82
CIITA-213ENST00000618327 IGLV2-18A0A075B6J9 118 aa9.94□□□□□ -0.82
CIITA-213ENST00000618327 USP17L23D6RBM5 183 aa9.94□□□□□ -0.82
CIITA-213ENST00000618327 Q6ZSN1 163 aa9.94□□□□□ -0.82
CIITA-213ENST00000618327 CDC42SE2Q9NRR3 84 aa9.94□□□□□ -0.82
CIITA-213ENST00000618327 A0A096LNJ9 63 aa9.94□□□□□ -0.82
CIITA-213ENST00000618327 UBE2D1P51668 147 aa9.94□□□□□ -0.82
CIITA-213ENST00000618327 KIF25-AS1Q9Y6Z4 181 aa9.94□□□□□ -0.82
CIITA-213ENST00000618327 A8MZ25 164 aa9.93□□□□□ -0.82
CIITA-213ENST00000618327 KRTAP1-3Q8IUG1 177 aa9.93□□□□□ -0.82
CIITA-213ENST00000618327 C11orf72Q8NBR9 251 aa9.93□□□□□ -0.82
CIITA-213ENST00000618327 LINC00959A0A1B0GUT2 108 aa9.92□□□□□ -0.82
CIITA-213ENST00000618327 IBA57-AS1B1ANH7 110 aa9.92□□□□□ -0.82
CIITA-213ENST00000618327 CHCHD7Q9BUK0 85 aa9.92□□□□□ -0.82
CIITA-213ENST00000618327 CD164L2Q6UWJ8 174 aa9.92□□□□□ -0.82
CIITA-213ENST00000618327 IGSF10Q6WRI0 2623 aa9.92□□□□□ -0.82
CIITA-213ENST00000618327 CCDC179H3BU77 68 aa9.92□□□□□ -0.82
CIITA-213ENST00000618327 KRTAP24-1Q3LI83 254 aa9.91□□□□□ -0.82
CIITA-213ENST00000618327 V9GYY9 64 aa9.91□□□□□ -0.82
CIITA-213ENST00000618327 IGKV4-1P06312 121 aa9.9□□□□□ -0.82
CIITA-213ENST00000618327 COX7CP15954 63 aa9.9□□□□□ -0.82
CIITA-213ENST00000618327 LST1O00453 97 aa9.89□□□□□ -0.83
CIITA-213ENST00000618327 C6orf99Q4VX62 202 aa9.89□□□□□ -0.83
CIITA-213ENST00000618327 NDUFC1O43677 76 aa9.89□□□□□ -0.83
CIITA-213ENST00000618327 HIGD2AQ9BW72 106 aa9.89□□□□□ -0.83
CIITA-213ENST00000618327 SEC61GP60059 68 aa9.89□□□□□ -0.83
CIITA-213ENST00000618327 Q6ZTC4 211 aa9.89□□□□□ -0.83
CIITA-213ENST00000618327 CELSR3Q9NYQ7 3312 aa9.88□□□□□ -0.83
CIITA-213ENST00000618327 LINC00694P0DN24 101 aa9.88□□□□□ -0.83
CIITA-213ENST00000618327 LINC00242Q5T6M2 205 aa9.88□□□□□ -0.83
CIITA-213ENST00000618327 LINC00315P59091 139 aa9.88□□□□□ -0.83
CIITA-213ENST00000618327 C14orf177Q52M58 125 aa9.87□□□□□ -0.83
CIITA-213ENST00000618327 CCKP06307 115 aa9.86□□□□□ -0.83
CIITA-213ENST00000618327 FAM19A3Q7Z5A8 133 aa9.86□□□□□ -0.83
CIITA-213ENST00000618327 IGLV4-69A0A075B6H9 119 aa9.86□□□□□ -0.83
CIITA-213ENST00000618327 TIMM17BO60830 172 aa9.86□□□□□ -0.83
CIITA-213ENST00000618327 ATP5EP56381 51 aaPredicted RBP9.86□□□□□ -0.83
CIITA-213ENST00000618327 CSDC2Q9Y534 153 aaKnown RBP9.85□□□□□ -0.83
CIITA-213ENST00000618327 SNURFQ9Y675 71 aa9.85□□□□□ -0.83
CIITA-213ENST00000618327 IGLV4-60A0A075B6I1 120 aa9.85□□□□□ -0.83
CIITA-213ENST00000618327 XAGE1AQ9HD64 81 aa9.85□□□□□ -0.83
CIITA-213ENST00000618327 AMELXQ99217 191 aa9.84□□□□□ -0.83
CIITA-213ENST00000618327 A0A096LNI7 61 aa9.84□□□□□ -0.83
CIITA-213ENST00000618327 IGKV2-24A0A0C4DH68 120 aa9.83□□□□□ -0.84
CIITA-213ENST00000618327 C4orf48Q5BLP8 95 aa9.83□□□□□ -0.84
CIITA-213ENST00000618327 LINC00526Q96FQ7 95 aa9.83□□□□□ -0.84
CIITA-213ENST00000618327 Q6ZQY7 126 aa9.83□□□□□ -0.84
CIITA-213ENST00000618327 SYCNQ0VAF6 134 aa9.83□□□□□ -0.84
CIITA-213ENST00000618327 Q6Q795 121 aa9.82□□□□□ -0.84
CIITA-213ENST00000618327 POM121L12Q8N7R1 296 aa9.82□□□□□ -0.84
CIITA-213ENST00000618327 MUC4Q99102 2169 aa9.82□□□□□ -0.84
CIITA-213ENST00000618327 KRTAP1-1Q07627 177 aa9.82□□□□□ -0.84
CIITA-213ENST00000618327 ATRQ13535 2644 aa9.82□□□□□ -0.84
CIITA-213ENST00000618327 B9D2Q9BPU9 175 aa9.81□□□□□ -0.84
CIITA-213ENST00000618327 SMIM1B2RUZ4 78 aa9.8□□□□□ -0.84
CIITA-213ENST00000618327 C3orf84H3BNL1 204 aa9.8□□□□□ -0.84
CIITA-213ENST00000618327 COX6A2Q02221 97 aa9.8□□□□□ -0.84
CIITA-213ENST00000618327 CELA1Q9UNI1 258 aa9.8□□□□□ -0.84
CIITA-213ENST00000618327 LINC01546A6NGU7 62 aa9.8□□□□□ -0.84
CIITA-213ENST00000618327 Q8IZM0 81 aa9.8□□□□□ -0.84
CIITA-213ENST00000618327 FRYLO94915 3013 aa9.79□□□□□ -0.84
CIITA-213ENST00000618327 CASC2Q6XLA1 102 aa9.79□□□□□ -0.84
CIITA-213ENST00000618327 WFDC10BQ8IUB3 73 aa9.79□□□□□ -0.84
CIITA-213ENST00000618327 SMIM26A0A096LP01 95 aa9.79□□□□□ -0.84
CIITA-213ENST00000618327 MAP1AP78559 2803 aaPredicted RBP9.79□□□□□ -0.84
CIITA-213ENST00000618327 M0QXV9 152 aa9.79□□□□□ -0.84
CIITA-213ENST00000618327 PRR4Q16378 134 aa9.79□□□□□ -0.84
CIITA-213ENST00000618327 X6R8D5 127 aa9.79□□□□□ -0.84
CIITA-213ENST00000618327 A0A087WZ39 114 aa9.78□□□□□ -0.84
CIITA-213ENST00000618327 A0A1B0GUV1 79 aa9.78□□□□□ -0.84
CIITA-213ENST00000618327 A6NED7 52 aa9.78□□□□□ -0.84
CIITA-213ENST00000618327 C1orf195Q5TG92 126 aa9.77□□□□□ -0.84
CIITA-213ENST00000618327 SMIM11BQ8TCY0 68 aa9.77□□□□□ -0.84
CIITA-213ENST00000618327 HRCT1Q6UXD1 115 aa9.77□□□□□ -0.85
CIITA-213ENST00000618327 TSPEAR-AS2P59090 65 aa9.77□□□□□ -0.85
CIITA-213ENST00000618327 Q6JHZ5 121 aa9.77□□□□□ -0.85
CIITA-213ENST00000618327 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.77□□□□□ -0.85
CIITA-213ENST00000618327 LYPD5Q6UWN5 251 aa9.76□□□□□ -0.85
CIITA-213ENST00000618327 FAM19A1Q7Z5A9 133 aa9.76□□□□□ -0.85
CIITA-213ENST00000618327 DMXL2Q8TDJ6 3036 aa9.76□□□□□ -0.85
CIITA-213ENST00000618327 CYSRT1A8MQ03 144 aa9.75□□□□□ -0.85
CIITA-213ENST00000618327 Q9UF83 564 aa9.75□□□□□ -0.85
CIITA-213ENST00000618327 BOD1L1Q8NFC6 3051 aa9.75□□□□□ -0.85
CIITA-213ENST00000618327 NUPR2A6NF83 97 aa9.74□□□□□ -0.85
CIITA-213ENST00000618327 NTM-AS1Q6ZSK4 140 aa9.74□□□□□ -0.85
CIITA-213ENST00000618327 A8MTW9 85 aa9.74□□□□□ -0.85
CIITA-213ENST00000618327 M0R2N4 97 aa9.74□□□□□ -0.85
CIITA-213ENST00000618327 WFDC13Q8IUB5 93 aa9.74□□□□□ -0.85
CIITA-213ENST00000618327 K7ERS5 55 aa9.73□□□□□ -0.85
CIITA-213ENST00000618327 COX17Q14061 63 aa9.73□□□□□ -0.85
CIITA-213ENST00000618327 SPEGQ15772 3267 aa9.73□□□□□ -0.85
CIITA-213ENST00000618327 KRTAP10-3P60369 221 aa9.73□□□□□ -0.85
CIITA-213ENST00000618327 UNQ6190/PRO20217Q6UXQ8 127 aa9.72□□□□□ -0.85
CIITA-213ENST00000618327 FRYQ5TBA9 3013 aa9.72□□□□□ -0.85
CIITA-213ENST00000618327 CHD6Q8TD26 2715 aa9.72□□□□□ -0.85
CIITA-213ENST00000618327 MGAM2Q2M2H8 2515 aa9.71□□□□□ -0.85
CIITA-213ENST00000618327 UNC79Q9P2D8 2635 aa9.71□□□□□ -0.86
CIITA-213ENST00000618327 Q8N9L7 120 aa9.71□□□□□ -0.86
CIITA-213ENST00000618327 FREM2Q5SZK8 3169 aa9.71□□□□□ -0.86
CIITA-213ENST00000618327 TRAV7A0A075B6U4 112 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms