RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 SMR3AQ99954 134 aa8.45□□□□□ -1.06
CDH5-208ENST00000614547 IMUPQ9GZP8 106 aa8.45□□□□□ -1.06
CDH5-208ENST00000614547 COL6A5A8TX70 2615 aa8.45□□□□□ -1.06
CDH5-208ENST00000614547 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
CDH5-208ENST00000614547 LINC00526Q96FQ7 95 aa8.44□□□□□ -1.06
CDH5-208ENST00000614547 HRCT1Q6UXD1 115 aa8.44□□□□□ -1.06
CDH5-208ENST00000614547 SCXQ7RTU7 201 aa8.44□□□□□ -1.06
CDH5-208ENST00000614547 H0YGX0 51 aa8.44□□□□□ -1.06
CDH5-208ENST00000614547 CSDC2Q9Y534 153 aaKnown RBP8.43□□□□□ -1.06
CDH5-208ENST00000614547 DEFB4AO15263 64 aa8.43□□□□□ -1.06
CDH5-208ENST00000614547 SS18Q15532 418 aa8.43□□□□□ -1.06
CDH5-208ENST00000614547 TMEM89A2RUT3 159 aa8.43□□□□□ -1.06
CDH5-208ENST00000614547 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
CDH5-208ENST00000614547 SMIM9A6NGZ8 99 aa8.42□□□□□ -1.06
CDH5-208ENST00000614547 IGLV4-60A0A075B6I1 120 aa8.41□□□□□ -1.06
CDH5-208ENST00000614547 C9orf129Q5T035 196 aaKnown RBP8.41□□□□□ -1.06
CDH5-208ENST00000614547 ANGP03950 147 aaKnown RBP8.41□□□□□ -1.06
CDH5-208ENST00000614547 FAM19A1Q7Z5A9 133 aa8.41□□□□□ -1.06
CDH5-208ENST00000614547 NTM-AS1Q6ZSK4 140 aa8.41□□□□□ -1.06
CDH5-208ENST00000614547 LRRC75A-AS1Q8N1F1 130 aa8.41□□□□□ -1.06
CDH5-208ENST00000614547 SERP2Q8N6R1 65 aa8.41□□□□□ -1.06
CDH5-208ENST00000614547 DEFB114Q30KQ6 69 aa8.4□□□□□ -1.06
CDH5-208ENST00000614547 GYPEP15421 78 aa8.4□□□□□ -1.06
CDH5-208ENST00000614547 C5orf47Q569G3 176 aa8.4□□□□□ -1.07
CDH5-208ENST00000614547 SNURFQ9Y675 71 aa8.4□□□□□ -1.07
CDH5-208ENST00000614547 A8MTW9 85 aa8.39□□□□□ -1.07
CDH5-208ENST00000614547 RBM3P98179 157 aaKnown RBP8.38□□□□□ -1.07
CDH5-208ENST00000614547 C9orf116Q5BN46 136 aaPredicted RBP8.38□□□□□ -1.07
CDH5-208ENST00000614547 CCL24O00175 119 aa8.38□□□□□ -1.07
CDH5-208ENST00000614547 UPK3BQ9BT76 320 aa8.38□□□□□ -1.07
CDH5-208ENST00000614547 BRI3O95415 125 aa8.38□□□□□ -1.07
CDH5-208ENST00000614547 DAD1P61803 113 aa8.38□□□□□ -1.07
CDH5-208ENST00000614547 LINC00269Q8N2A0 174 aa8.38□□□□□ -1.07
CDH5-208ENST00000614547 FAM104AQ969W3 186 aa8.38□□□□□ -1.07
CDH5-208ENST00000614547 ODF3L2Q3SX64 289 aa8.37□□□□□ -1.07
CDH5-208ENST00000614547 C6orf99Q4VX62 202 aa8.37□□□□□ -1.07
CDH5-208ENST00000614547 C1orf158Q8N1D5 194 aa8.37□□□□□ -1.07
CDH5-208ENST00000614547 J3QKU1 62 aa8.37□□□□□ -1.07
CDH5-208ENST00000614547 PF4P02776 101 aa8.37□□□□□ -1.07
CDH5-208ENST00000614547 RPL28P46779 137 aaKnown RBP8.37□□□□□ -1.07
CDH5-208ENST00000614547 ZNF702PQ9H963 129 aa8.37□□□□□ -1.07
CDH5-208ENST00000614547 IGLV5-39A0A0G2JS06 123 aa8.37□□□□□ -1.07
CDH5-208ENST00000614547 PRB2P02812 416 aaPredicted RBP8.37□□□□□ -1.07
CDH5-208ENST00000614547 C1orf43Q9BWL3 253 aa8.37□□□□□ -1.07
CDH5-208ENST00000614547 TRBV10-1A0A0K0K1A3 114 aa8.36□□□□□ -1.07
CDH5-208ENST00000614547 C11orf72Q8NBR9 251 aa8.36□□□□□ -1.07
CDH5-208ENST00000614547 TRAV25A0A0B4J276 109 aa8.36□□□□□ -1.07
CDH5-208ENST00000614547 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
CDH5-208ENST00000614547 BAHCC1Q9P281 2608 aa8.34□□□□□ -1.07
CDH5-208ENST00000614547 HIVEP1P15822 2718 aa8.34□□□□□ -1.07
CDH5-208ENST00000614547 IGKV2-28A0A075B6P5 120 aa8.34□□□□□ -1.07
CDH5-208ENST00000614547 IGKV2D-28P01615 120 aa8.34□□□□□ -1.07
CDH5-208ENST00000614547 KLK9Q2XQG4 91 aa8.34□□□□□ -1.08
CDH5-208ENST00000614547 DEFB121Q5J5C9 76 aa8.33□□□□□ -1.08
CDH5-208ENST00000614547 OTOGQ6ZRI0 2925 aa8.33□□□□□ -1.08
CDH5-208ENST00000614547 TRBV6-8A0A0A6YYG3 113 aa8.33□□□□□ -1.08
CDH5-208ENST00000614547 DEFB113Q30KQ7 82 aa8.33□□□□□ -1.08
CDH5-208ENST00000614547 IBA57-AS1B1ANH7 110 aa8.33□□□□□ -1.08
CDH5-208ENST00000614547 FAM222AQ5U5X8 452 aa8.33□□□□□ -1.08
CDH5-208ENST00000614547 Q6JHZ5 121 aa8.33□□□□□ -1.08
CDH5-208ENST00000614547 CYSTM1Q9H1C7 97 aa8.32□□□□□ -1.08
CDH5-208ENST00000614547 XAGE1AQ9HD64 81 aa8.32□□□□□ -1.08
CDH5-208ENST00000614547 TMEM258P61165 79 aa8.32□□□□□ -1.08
CDH5-208ENST00000614547 JMJD7-PLA2G4BH0Y9G9 81 aa8.32□□□□□ -1.08
CDH5-208ENST00000614547 MRAPQ8TCY5 172 aa8.32□□□□□ -1.08
CDH5-208ENST00000614547 PKIGQ9Y2B9 76 aa8.32□□□□□ -1.08
CDH5-208ENST00000614547 F5H768 121 aa8.31□□□□□ -1.08
CDH5-208ENST00000614547 DSCR9P59020 149 aa8.31□□□□□ -1.08
CDH5-208ENST00000614547 IGLV5-45A0A087WSX0 123 aa8.31□□□□□ -1.08
CDH5-208ENST00000614547 IGHV4-28A0A0C4DH34 117 aa8.31□□□□□ -1.08
CDH5-208ENST00000614547 TMEM256-PLSCR3K7ERE1 68 aa8.31□□□□□ -1.08
CDH5-208ENST00000614547 DEFB105AQ8NG35 78 aa8.31□□□□□ -1.08
CDH5-208ENST00000614547 LINC00959A0A1B0GUT2 108 aa8.31□□□□□ -1.08
CDH5-208ENST00000614547 FAM236DA0A1B0GTK5 79 aa8.3□□□□□ -1.08
CDH5-208ENST00000614547 FAM236CP0DP71 79 aa8.3□□□□□ -1.08
CDH5-208ENST00000614547 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
CDH5-208ENST00000614547 BEAN1Q3B7T3 259 aa8.3□□□□□ -1.08
CDH5-208ENST00000614547 Q6YL49 198 aa8.3□□□□□ -1.08
CDH5-208ENST00000614547 C4orf3Q8WVX3 66 aa8.3□□□□□ -1.08
CDH5-208ENST00000614547 A0A0U1RQV1 116 aa8.29□□□□□ -1.08
CDH5-208ENST00000614547 DPH3Q96FX2 82 aa8.29□□□□□ -1.08
CDH5-208ENST00000614547 TRBV6-4A0A1B0GX49 114 aa8.29□□□□□ -1.08
CDH5-208ENST00000614547 CRYGAP11844 174 aa8.29□□□□□ -1.08
CDH5-208ENST00000614547 Q6ZQY7 126 aa8.28□□□□□ -1.08
CDH5-208ENST00000614547 LINC01561Q8N1V8 128 aa8.28□□□□□ -1.08
CDH5-208ENST00000614547 MPLKIPQ8TAP9 179 aa8.28□□□□□ -1.08
CDH5-208ENST00000614547 CCKP06307 115 aa8.28□□□□□ -1.08
CDH5-208ENST00000614547 J3QLI3 93 aa8.26□□□□□ -1.09
CDH5-208ENST00000614547 KLK12Q9UKR0 248 aa8.26□□□□□ -1.09
CDH5-208ENST00000614547 FBN1P35555 2871 aaKnown RBP8.26□□□□□ -1.09
CDH5-208ENST00000614547 SPAG11BQ08648 103 aa8.26□□□□□ -1.09
CDH5-208ENST00000614547 FHL2Q14192 279 aa8.26□□□□□ -1.09
CDH5-208ENST00000614547 Q8N814 137 aa8.26□□□□□ -1.09
CDH5-208ENST00000614547 CHCHD10Q8WYQ3 142 aaPredicted RBP8.26□□□□□ -1.09
CDH5-208ENST00000614547 ZNF469Q96JG9 3925 aaPredicted RBP8.26□□□□□ -1.09
CDH5-208ENST00000614547 BRK1Q8WUW1 75 aa8.25□□□□□ -1.09
CDH5-208ENST00000614547 RMI2Q96E14 147 aa8.25□□□□□ -1.09
CDH5-208ENST00000614547 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
CDH5-208ENST00000614547 IGHV4-31P0DP07 118 aa8.25□□□□□ -1.09
CDH5-208ENST00000614547 Q8N3U1 123 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms