RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 TRGC2P03986 189 aa7.52□□□□□ -1.21
PDLIM2-218ENST00000614502 C9orf116Q5BN46 136 aaPredicted RBP7.52□□□□□ -1.21
PDLIM2-218ENST00000614502 A0A1W2PNN7 141 aa7.51□□□□□ -1.21
PDLIM2-218ENST00000614502 HBDP02042 147 aa7.51□□□□□ -1.21
PDLIM2-218ENST00000614502 LINC01561Q8N1V8 128 aa7.51□□□□□ -1.21
PDLIM2-218ENST00000614502 TLX1NBP0CAT3 122 aa7.5□□□□□ -1.21
PDLIM2-218ENST00000614502 KRTAP10-8P60410 259 aa7.5□□□□□ -1.21
PDLIM2-218ENST00000614502 SEC11AP67812 179 aa7.5□□□□□ -1.21
PDLIM2-218ENST00000614502 PDZD11Q5EBL8 140 aa7.5□□□□□ -1.21
PDLIM2-218ENST00000614502 CHCHD1Q96BP2 118 aaKnown RBP7.5□□□□□ -1.21
PDLIM2-218ENST00000614502 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
PDLIM2-218ENST00000614502 SCO1O75880 301 aa7.49□□□□□ -1.21
PDLIM2-218ENST00000614502 HERVK_113P63121 156 aa7.49□□□□□ -1.21
PDLIM2-218ENST00000614502 KIAA0087Q14695 138 aa7.49□□□□□ -1.21
PDLIM2-218ENST00000614502 PMVKQ15126 192 aa7.49□□□□□ -1.21
PDLIM2-218ENST00000614502 PMCHL1Q16048 86 aa7.49□□□□□ -1.21
PDLIM2-218ENST00000614502 PSORS1C2Q9UIG4 136 aa7.49□□□□□ -1.21
PDLIM2-218ENST00000614502 TINCRA0A1B0GVN0 87 aa7.48□□□□□ -1.21
PDLIM2-218ENST00000614502 C1orf137Q5JT78 98 aa7.48□□□□□ -1.21
PDLIM2-218ENST00000614502 CDKN2A-AS1Q9UH64 79 aa7.48□□□□□ -1.21
PDLIM2-218ENST00000614502 TRBV30A0A0K0K1B3 111 aa7.47□□□□□ -1.21
PDLIM2-218ENST00000614502 GEMIN7Q9H840 131 aaKnown RBP7.47□□□□□ -1.21
PDLIM2-218ENST00000614502 IGLV5-45A0A087WSX0 123 aa7.46□□□□□ -1.22
PDLIM2-218ENST00000614502 ATP5LO75964 103 aa7.46□□□□□ -1.22
PDLIM2-218ENST00000614502 PHF5AQ7RTV0 110 aaKnown RBP7.46□□□□□ -1.22
PDLIM2-218ENST00000614502 BAGE3Q86Y29 109 aa7.46□□□□□ -1.22
PDLIM2-218ENST00000614502 DIRC1Q969H9 104 aa7.46□□□□□ -1.22
PDLIM2-218ENST00000614502 PACRGQ96M98 296 aaPredicted RBP7.46□□□□□ -1.22
PDLIM2-218ENST00000614502 LINC00310P59036 64 aa7.45□□□□□ -1.22
PDLIM2-218ENST00000614502 C10orf25Q5T742 122 aa7.45□□□□□ -1.22
PDLIM2-218ENST00000614502 UNQ6190/PRO20217Q6UXQ8 127 aa7.45□□□□□ -1.22
PDLIM2-218ENST00000614502 C6orf48Q9UBA6 75 aa7.45□□□□□ -1.22
PDLIM2-218ENST00000614502 HSBP1O75506 76 aa7.44□□□□□ -1.22
PDLIM2-218ENST00000614502 PRSS2P07478 247 aa7.44□□□□□ -1.22
PDLIM2-218ENST00000614502 IGLC3P0DOY3 106 aa7.44□□□□□ -1.22
PDLIM2-218ENST00000614502 GAGE2EQ4V326 116 aa7.44□□□□□ -1.22
PDLIM2-218ENST00000614502 LINC00469Q8N7U9 141 aa7.44□□□□□ -1.22
PDLIM2-218ENST00000614502 GAGE2DQ9UEU5 116 aa7.44□□□□□ -1.22
PDLIM2-218ENST00000614502 SMIM1B2RUZ4 78 aa7.43□□□□□ -1.22
PDLIM2-218ENST00000614502 NDUFC2-KCTD14E9PQ53 114 aa7.43□□□□□ -1.22
PDLIM2-218ENST00000614502 IGLV7-43P04211 117 aa7.43□□□□□ -1.22
PDLIM2-218ENST00000614502 NDUFA6P56556 154 aa7.43□□□□□ -1.22
PDLIM2-218ENST00000614502 Q8IZM0 81 aa7.43□□□□□ -1.22
PDLIM2-218ENST00000614502 FAM19A2Q8N3H0 131 aa7.43□□□□□ -1.22
PDLIM2-218ENST00000614502 SERF1AO75920 110 aa7.42□□□□□ -1.22
PDLIM2-218ENST00000614502 UBE2BP63146 152 aa7.42□□□□□ -1.22
PDLIM2-218ENST00000614502 C6orf226Q5I0X4 101 aa7.42□□□□□ -1.22
PDLIM2-218ENST00000614502 C2orf82Q6UX34 121 aa7.42□□□□□ -1.22
PDLIM2-218ENST00000614502 FAM19A5Q7Z5A7 132 aaPredicted RBP7.42□□□□□ -1.22
PDLIM2-218ENST00000614502 IFI27L1Q96BM0 104 aa7.42□□□□□ -1.22
PDLIM2-218ENST00000614502 TOMM7Q9P0U1 55 aa7.42□□□□□ -1.22
PDLIM2-218ENST00000614502 TRAV12-1A0A0B4J245 112 aa7.41□□□□□ -1.22
PDLIM2-218ENST00000614502 M0QXV9 152 aa7.41□□□□□ -1.22
PDLIM2-218ENST00000614502 NUPR1O60356 82 aa7.41□□□□□ -1.22
PDLIM2-218ENST00000614502 CKS1BP61024 79 aa7.41□□□□□ -1.22
PDLIM2-218ENST00000614502 FAM168BA1KXE4 195 aa7.4□□□□□ -1.22
PDLIM2-218ENST00000614502 H0Y9J4 135 aa7.4□□□□□ -1.22
PDLIM2-218ENST00000614502 H3BRM9 83 aa7.4□□□□□ -1.22
PDLIM2-218ENST00000614502 SPINK8P0C7L1 97 aa7.4□□□□□ -1.22
PDLIM2-218ENST00000614502 ZNF22P17026 224 aaPredicted RBP7.4□□□□□ -1.22
PDLIM2-218ENST00000614502 LPAP08519 4548 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 C11orf86A6NJI1 115 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 HIST1H2BKO60814 126 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 HIST1H2BJP06899 126 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 S100A1P23297 94 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 HIST1H2BOP23527 126 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 HIST1H2BBP33778 126 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 HIST1H2BDP58876 126 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 HIST1H2BCP62807 126 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 HIST2H2BEQ16778 126 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 HIST1H2BHQ93079 126 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 HIST1H2BNQ99877 126 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 HIST1H2BMQ99879 126 aa7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 CHTOPQ9Y3Y2 248 aaKnown RBP7.39□□□□□ -1.23
PDLIM2-218ENST00000614502 IGLV1-50A0A075B6I6 118 aa7.38□□□□□ -1.23
PDLIM2-218ENST00000614502 IGLV5-39A0A0G2JS06 123 aa7.38□□□□□ -1.23
PDLIM2-218ENST00000614502 LEPROTL1O95214 131 aa7.38□□□□□ -1.23
PDLIM2-218ENST00000614502 CXCL5P42830 114 aa7.38□□□□□ -1.23
PDLIM2-218ENST00000614502 COX7B2Q8TF08 81 aa7.38□□□□□ -1.23
PDLIM2-218ENST00000614502 F8VRH5 84 aa7.37□□□□□ -1.23
PDLIM2-218ENST00000614502 ATP6V1G1O75348 118 aa7.36□□□□□ -1.23
PDLIM2-218ENST00000614502 RPL13AP40429 203 aaKnown RBP7.36□□□□□ -1.23
PDLIM2-218ENST00000614502 LBHQ53QV2 105 aaPredicted RBP7.36□□□□□ -1.23
PDLIM2-218ENST00000614502 C9orf129Q5T035 196 aaKnown RBP7.36□□□□□ -1.23
PDLIM2-218ENST00000614502 TMEM170BQ5T4T1 132 aa7.36□□□□□ -1.23
PDLIM2-218ENST00000614502 FABP4P15090 132 aa7.35□□□□□ -1.23
PDLIM2-218ENST00000614502 PRR26Q8N8Z3 221 aa7.35□□□□□ -1.23
PDLIM2-218ENST00000614502 HSPB8Q9UJY1 196 aa7.35□□□□□ -1.23
PDLIM2-218ENST00000614502 KRTAP11-1Q8IUC1 163 aa7.34□□□□□ -1.23
PDLIM2-218ENST00000614502 KRTAP7-1Q8IUC3 87 aa7.34□□□□□ -1.23
PDLIM2-218ENST00000614502 TMEM223A0PJW6 202 aa7.33□□□□□ -1.24
PDLIM2-218ENST00000614502 COA6Q5JTJ3 125 aaKnown RBP7.33□□□□□ -1.24
PDLIM2-218ENST00000614502 TP73-AS1Q9UF72 201 aa7.33□□□□□ -1.24
PDLIM2-218ENST00000614502 C22orf24Q9Y442 160 aa7.33□□□□□ -1.24
PDLIM2-218ENST00000614502 H0Y8G0 127 aa7.32□□□□□ -1.24
PDLIM2-218ENST00000614502 ZNF861PO60384 105 aa7.32□□□□□ -1.24
PDLIM2-218ENST00000614502 KRTAP1-4P0C5Y4 121 aa7.3□□□□□ -1.24
PDLIM2-218ENST00000614502 MRPL55Q7Z7F7 128 aaKnown RBP7.3□□□□□ -1.24
PDLIM2-218ENST00000614502 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms