RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 SHISA2Q6UWI4 295 aa8.85□□□□□ -0.99
MSH6-213ENST00000614496 WFDC9Q8NEX5 89 aa8.85□□□□□ -0.99
MSH6-213ENST00000614496 REG3AQ06141 175 aa8.85□□□□□ -0.99
MSH6-213ENST00000614496 IMUPQ9GZP8 106 aa8.85□□□□□ -0.99
MSH6-213ENST00000614496 CXCL5P42830 114 aa8.84□□□□□ -0.99
MSH6-213ENST00000614496 DSCR8Q96T75 97 aa8.84□□□□□ -0.99
MSH6-213ENST00000614496 KLK5Q9Y337 293 aaPredicted RBP8.84□□□□□ -0.99
MSH6-213ENST00000614496 A0A087WZ39 114 aa8.84□□□□□ -0.99
MSH6-213ENST00000614496 JMJD7-PLA2G4BH0Y9G9 81 aa8.83□□□□□ -1
MSH6-213ENST00000614496 ITPR3Q14573 2671 aa8.82□□□□□ -1
MSH6-213ENST00000614496 XAGE1AQ9HD64 81 aa8.82□□□□□ -1
MSH6-213ENST00000614496 TMEM256-PLSCR3K7ERE1 68 aa8.82□□□□□ -1
MSH6-213ENST00000614496 CELSR1Q9NYQ6 3014 aa8.82□□□□□ -1
MSH6-213ENST00000614496 APOC4P55056 127 aa8.82□□□□□ -1
MSH6-213ENST00000614496 IGHV3OR16-9A0A0B4J2B5 98 aa8.81□□□□□ -1
MSH6-213ENST00000614496 IGLV1-51P01701 117 aa8.81□□□□□ -1
MSH6-213ENST00000614496 IGSF10Q6WRI0 2623 aa8.81□□□□□ -1
MSH6-213ENST00000614496 ENHOQ6UWT2 76 aa8.81□□□□□ -1
MSH6-213ENST00000614496 GHRHP01286 108 aa8.81□□□□□ -1
MSH6-213ENST00000614496 LINC00846Q9NV44 126 aa8.81□□□□□ -1
MSH6-213ENST00000614496 TRBV7-7A0A0K0K1E9 115 aa8.8□□□□□ -1
MSH6-213ENST00000614496 RBM3P98179 157 aaKnown RBP8.8□□□□□ -1
MSH6-213ENST00000614496 SMCR5Q8TEV8 140 aa8.8□□□□□ -1
MSH6-213ENST00000614496 FASNP49327 2511 aaKnown RBP8.8□□□□□ -1
MSH6-213ENST00000614496 CRYBG3Q68DQ2 2970 aa8.8□□□□□ -1
MSH6-213ENST00000614496 IGKV2-28A0A075B6P5 120 aa8.8□□□□□ -1
MSH6-213ENST00000614496 IGKV2D-28P01615 120 aa8.8□□□□□ -1
MSH6-213ENST00000614496 SMR3AQ99954 134 aa8.8□□□□□ -1
MSH6-213ENST00000614496 USP17L23D6RBM5 183 aa8.79□□□□□ -1
MSH6-213ENST00000614496 COX7CP15954 63 aa8.79□□□□□ -1
MSH6-213ENST00000614496 HIGD2BQ4VC39 106 aa8.79□□□□□ -1
MSH6-213ENST00000614496 CFAP46Q8IYW2 2715 aa8.79□□□□□ -1
MSH6-213ENST00000614496 A0A096LNT2 108 aa8.79□□□□□ -1
MSH6-213ENST00000614496 A8MTW9 85 aa8.79□□□□□ -1
MSH6-213ENST00000614496 FSHBP01225 129 aa8.79□□□□□ -1
MSH6-213ENST00000614496 SPART-AS1P0CW21 52 aa8.78□□□□□ -1
MSH6-213ENST00000614496 CAMK2N2Q96S95 79 aa8.78□□□□□ -1
MSH6-213ENST00000614496 CD164L2Q6UWJ8 174 aa8.77□□□□□ -1
MSH6-213ENST00000614496 UNQ6190/PRO20217Q6UXQ8 127 aa8.77□□□□□ -1
MSH6-213ENST00000614496 DEFB105AQ8NG35 78 aa8.77□□□□□ -1
MSH6-213ENST00000614496 SCXQ7RTU7 201 aa8.77□□□□□ -1.01
MSH6-213ENST00000614496 Q8IZM0 81 aa8.77□□□□□ -1.01
MSH6-213ENST00000614496 J3KT08 172 aa8.77□□□□□ -1.01
MSH6-213ENST00000614496 C9orf66Q5T8R8 295 aa8.77□□□□□ -1.01
MSH6-213ENST00000614496 C20orf197Q8N268 126 aa8.77□□□□□ -1.01
MSH6-213ENST00000614496 NBEAL2Q6ZNJ1 2754 aa8.77□□□□□ -1.01
MSH6-213ENST00000614496 GCN1Q92616 2671 aaKnown RBP8.76□□□□□ -1.01
MSH6-213ENST00000614496 UPK3BQ9BT76 320 aa8.76□□□□□ -1.01
MSH6-213ENST00000614496 C6orf223Q8N319 242 aa8.75□□□□□ -1.01
MSH6-213ENST00000614496 Q8N3U1 123 aa8.75□□□□□ -1.01
MSH6-213ENST00000614496 IGHV4-28A0A0C4DH34 117 aa8.75□□□□□ -1.01
MSH6-213ENST00000614496 Q6ZQY7 126 aa8.75□□□□□ -1.01
MSH6-213ENST00000614496 UTP20O75691 2785 aaKnown RBP8.75□□□□□ -1.01
MSH6-213ENST00000614496 DEFB121Q5J5C9 76 aa8.75□□□□□ -1.01
MSH6-213ENST00000614496 IGKV2D-24A0A075B6R9 120 aa8.74□□□□□ -1.01
MSH6-213ENST00000614496 Q8N814 137 aa8.74□□□□□ -1.01
MSH6-213ENST00000614496 LOC107984640A0A0U1RRK4 108 aa8.74□□□□□ -1.01
MSH6-213ENST00000614496 DIRC1Q969H9 104 aa8.74□□□□□ -1.01
MSH6-213ENST00000614496 Q6JHZ5 121 aa8.73□□□□□ -1.01
MSH6-213ENST00000614496 SERP2Q8N6R1 65 aa8.73□□□□□ -1.01
MSH6-213ENST00000614496 PKIGQ9Y2B9 76 aa8.73□□□□□ -1.01
MSH6-213ENST00000614496 HILS1P60008 231 aa8.73□□□□□ -1.01
MSH6-213ENST00000614496 HECTD1Q9ULT8 2610 aa8.73□□□□□ -1.01
MSH6-213ENST00000614496 LYRM9A8MSI8 78 aa8.72□□□□□ -1.01
MSH6-213ENST00000614496 CCKP06307 115 aa8.72□□□□□ -1.01
MSH6-213ENST00000614496 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
MSH6-213ENST00000614496 CYSRT1A8MQ03 144 aa8.72□□□□□ -1.01
MSH6-213ENST00000614496 J3QKU1 62 aa8.72□□□□□ -1.01
MSH6-213ENST00000614496 GIG44P09565 113 aaPredicted RBP8.72□□□□□ -1.01
MSH6-213ENST00000614496 FAM19A1Q7Z5A9 133 aa8.72□□□□□ -1.01
MSH6-213ENST00000614496 SMIM9A6NGZ8 99 aa8.72□□□□□ -1.01
MSH6-213ENST00000614496 NKAPP1Q8N9T2 125 aa8.72□□□□□ -1.01
MSH6-213ENST00000614496 KIR2DL5BQ8NHK3 375 aa8.71□□□□□ -1.01
MSH6-213ENST00000614496 PPDPFQ9H3Y8 114 aa8.7□□□□□ -1.02
MSH6-213ENST00000614496 COX7BP24311 80 aa8.69□□□□□ -1.02
MSH6-213ENST00000614496 MRAPQ8TCY5 172 aa8.69□□□□□ -1.02
MSH6-213ENST00000614496 FAM110AQ9BQ89 295 aa8.69□□□□□ -1.02
MSH6-213ENST00000614496 FBN2P35556 2912 aa8.69□□□□□ -1.02
MSH6-213ENST00000614496 PLAC8L1A1L4L8 177 aa8.69□□□□□ -1.02
MSH6-213ENST00000614496 IL17DQ8TAD2 202 aa8.68□□□□□ -1.02
MSH6-213ENST00000614496 A0A1B0GUV1 79 aa8.68□□□□□ -1.02
MSH6-213ENST00000614496 INAFM1C9JVW0 142 aa8.68□□□□□ -1.02
MSH6-213ENST00000614496 FAM19A3Q7Z5A8 133 aa8.67□□□□□ -1.02
MSH6-213ENST00000614496 USP24Q9UPU5 2620 aa8.67□□□□□ -1.02
MSH6-213ENST00000614496 ATRQ13535 2644 aa8.66□□□□□ -1.02
MSH6-213ENST00000614496 NF1P21359 2839 aa8.66□□□□□ -1.02
MSH6-213ENST00000614496 TRBV10-3A0A0K0K1G6 114 aa8.66□□□□□ -1.02
MSH6-213ENST00000614496 C10orf25Q5T742 122 aa8.66□□□□□ -1.02
MSH6-213ENST00000614496 F8P00451 2351 aa8.66□□□□□ -1.02
MSH6-213ENST00000614496 COX17Q14061 63 aa8.66□□□□□ -1.02
MSH6-213ENST00000614496 CSNK1G2-AS1Q8NCQ2 148 aa8.65□□□□□ -1.02
MSH6-213ENST00000614496 SNURFQ9Y675 71 aa8.65□□□□□ -1.02
MSH6-213ENST00000614496 A0A0U1RQV1 116 aa8.64□□□□□ -1.03
MSH6-213ENST00000614496 LELP1Q5T871 98 aa8.64□□□□□ -1.03
MSH6-213ENST00000614496 ATP5EP2Q5VTU8 51 aa8.64□□□□□ -1.03
MSH6-213ENST00000614496 CR1P17927 2039 aa8.64□□□□□ -1.03
MSH6-213ENST00000614496 NREPQ16612 68 aa8.64□□□□□ -1.03
MSH6-213ENST00000614496 CELA1Q9UNI1 258 aa8.64□□□□□ -1.03
MSH6-213ENST00000614496 LY6G6DO95868 133 aa8.63□□□□□ -1.03
MSH6-213ENST00000614496 C16orf95Q9H693 158 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms