RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 ZC2HC1BQ5TFG8 222 aa4.29□□□□□ -1.72
CBWD3-210ENST00000614398 ARL17AQ8IVW1 177 aa4.29□□□□□ -1.72
CBWD3-210ENST00000614398 MAPKAPK5-AS1Q8N8E1 139 aa4.29□□□□□ -1.72
CBWD3-210ENST00000614398 TIMM17AQ99595 171 aa4.29□□□□□ -1.72
CBWD3-210ENST00000614398 LOC389332A0A1B0GUA5 103 aa4.29□□□□□ -1.72
CBWD3-210ENST00000614398 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
CBWD3-210ENST00000614398 PLNP26678 52 aa4.29□□□□□ -1.72
CBWD3-210ENST00000614398 HRCT1Q6UXD1 115 aa4.29□□□□□ -1.72
CBWD3-210ENST00000614398 TMEM141Q96I45 108 aa4.29□□□□□ -1.72
CBWD3-210ENST00000614398 NDUFC2-KCTD14E9PQ53 114 aa4.28□□□□□ -1.72
CBWD3-210ENST00000614398 C4orf26Q17RF5 130 aa4.28□□□□□ -1.72
CBWD3-210ENST00000614398 PLEKHB2Q96CS7 222 aa4.28□□□□□ -1.72
CBWD3-210ENST00000614398 C2orf48Q96LS8 159 aa4.28□□□□□ -1.72
CBWD3-210ENST00000614398 STAB2Q8WWQ8 2551 aa4.28□□□□□ -1.72
CBWD3-210ENST00000614398 TRBV10-2A0A0K0K1G8 114 aa4.28□□□□□ -1.72
CBWD3-210ENST00000614398 FAM236AA0A1B0GUQ0 79 aa4.28□□□□□ -1.72
CBWD3-210ENST00000614398 FAM236BA0A1B0GV22 79 aa4.28□□□□□ -1.72
CBWD3-210ENST00000614398 IGIPA6NJ69 53 aa4.28□□□□□ -1.72
CBWD3-210ENST00000614398 ESRGQ1W209 222 aa4.28□□□□□ -1.72
CBWD3-210ENST00000614398 NTN5Q8WTR8 489 aaPredicted RBP4.28□□□□□ -1.72
CBWD3-210ENST00000614398 UBE2WQ96B02 151 aa4.28□□□□□ -1.72
CBWD3-210ENST00000614398 IGHV3-38A0A0C4DH36 116 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 H3BT86 120 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 ATOX1O00244 68 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 DNAH10OSP0CZ25 163 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 CCL18P55774 89 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 LINC01556Q5JQF7 62 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 C2orf66Q6UXQ4 117 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 TTTY13Q9BZ97 58 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 UBE2D4Q9Y2X8 147 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 TRAV12-1A0A0B4J245 112 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 EPM2AB3EWF7 344 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 HIST1H4AP62805 103 aaKnown RBP4.27□□□□□ -1.73
CBWD3-210ENST00000614398 ATXN8Q156A1 80 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 PAPPA-AS1Q5QFB9 102 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 FAM19A3Q7Z5A8 133 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 LINC00643Q86TS7 51 aa4.27□□□□□ -1.73
CBWD3-210ENST00000614398 J3QL48 77 aa4.26□□□□□ -1.73
CBWD3-210ENST00000614398 C6orf226Q5I0X4 101 aa4.26□□□□□ -1.73
CBWD3-210ENST00000614398 C5orf38Q86SI9 138 aa4.26□□□□□ -1.73
CBWD3-210ENST00000614398 LINC00588Q9Y4M8 146 aa4.26□□□□□ -1.73
CBWD3-210ENST00000614398 PRSS1P07477 247 aa4.26□□□□□ -1.73
CBWD3-210ENST00000614398 LINC01620Q4KN68 170 aa4.26□□□□□ -1.73
CBWD3-210ENST00000614398 SDIM1Q6ZPB5 146 aa4.26□□□□□ -1.73
CBWD3-210ENST00000614398 FAM104AQ969W3 186 aa4.26□□□□□ -1.73
CBWD3-210ENST00000614398 AMELXQ99217 191 aa4.26□□□□□ -1.73
CBWD3-210ENST00000614398 C1orf43Q9BWL3 253 aa4.26□□□□□ -1.73
CBWD3-210ENST00000614398 UBE2L6O14933 153 aa4.25□□□□□ -1.73
CBWD3-210ENST00000614398 CASC10Q5T4H9 136 aa4.25□□□□□ -1.73
CBWD3-210ENST00000614398 PRO1854Q9UHT4 67 aa4.25□□□□□ -1.73
CBWD3-210ENST00000614398 ALMS1Q8TCU4 4167 aa4.25□□□□□ -1.73
CBWD3-210ENST00000614398 IGLV4-3A0A075B6K6 122 aa4.25□□□□□ -1.73
CBWD3-210ENST00000614398 SCGB3A1Q96QR1 104 aa4.25□□□□□ -1.73
CBWD3-210ENST00000614398 CDC42SE2Q9NRR3 84 aa4.25□□□□□ -1.73
CBWD3-210ENST00000614398 PRR34Q9NV39 138 aa4.25□□□□□ -1.73
CBWD3-210ENST00000614398 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.24□□□□□ -1.73
CBWD3-210ENST00000614398 TRAV13-1A0A0B4J241 112 aa4.24□□□□□ -1.73
CBWD3-210ENST00000614398 IGKV2-29A2NJV5 120 aaPredicted RBP4.24□□□□□ -1.73
CBWD3-210ENST00000614398 J3QQQ9 107 aa4.24□□□□□ -1.73
CBWD3-210ENST00000614398 OXTP01178 125 aa4.24□□□□□ -1.73
CBWD3-210ENST00000614398 RPL39P62891 51 aaKnown RBP4.24□□□□□ -1.73
CBWD3-210ENST00000614398 DNAH6Q9C0G6 4158 aa4.24□□□□□ -1.73
CBWD3-210ENST00000614398 A0A0B4J2C4 111 aa4.24□□□□□ -1.73
CBWD3-210ENST00000614398 PFN2P35080 140 aa4.24□□□□□ -1.73
CBWD3-210ENST00000614398 F8VRH5 84 aa4.23□□□□□ -1.73
CBWD3-210ENST00000614398 CFC1BP0CG36 223 aa4.23□□□□□ -1.73
CBWD3-210ENST00000614398 CFC1P0CG37 223 aa4.23□□□□□ -1.73
CBWD3-210ENST00000614398 C1orf195Q5TG92 126 aa4.23□□□□□ -1.73
CBWD3-210ENST00000614398 WFDC10BQ8IUB3 73 aa4.23□□□□□ -1.73
CBWD3-210ENST00000614398 MRPL35Q9NZE8 188 aaKnown RBP4.23□□□□□ -1.73
CBWD3-210ENST00000614398 TRBV30A0A0K0K1B3 111 aa4.23□□□□□ -1.73
CBWD3-210ENST00000614398 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.73
CBWD3-210ENST00000614398 LINC01561Q8N1V8 128 aa4.23□□□□□ -1.73
CBWD3-210ENST00000614398 VPS13DQ5THJ4 4388 aa4.23□□□□□ -1.73
CBWD3-210ENST00000614398 TEX49A0A1B0GTD5 131 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 IBA57-AS1B1ANH7 110 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 NDUFC2O95298 119 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 IGHV3-33P01772 117 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 LINC00336Q6ZUF6 198 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 DNAH1Q9P2D7 4330 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 IGLV4-60A0A075B6I1 120 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 IGLV5-45A0A087WSX0 123 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 hADV29S1A0JD25 119 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 DGAT2L7PQ6IED9 249 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 SERP2Q8N6R1 65 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 LINC00476Q8WZB0 136 aa4.22□□□□□ -1.73
CBWD3-210ENST00000614398 IGHV3-30P01768 117 aa4.21□□□□□ -1.73
CBWD3-210ENST00000614398 IGHV3-30-5P0DP03 117 aa4.21□□□□□ -1.73
CBWD3-210ENST00000614398 MIAQ16674 131 aa4.21□□□□□ -1.73
CBWD3-210ENST00000614398 C2orf82Q6UX34 121 aa4.21□□□□□ -1.73
CBWD3-210ENST00000614398 UBE2DNLQ8IWF7 75 aa4.21□□□□□ -1.73
CBWD3-210ENST00000614398 Q9H8V8 135 aa4.21□□□□□ -1.73
CBWD3-210ENST00000614398 SERP1Q9Y6X1 66 aa4.21□□□□□ -1.73
CBWD3-210ENST00000614398 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.21□□□□□ -1.74
CBWD3-210ENST00000614398 STARD9Q9P2P6 4700 aa4.21□□□□□ -1.74
CBWD3-210ENST00000614398 ZNF815PA8K554 130 aa4.2□□□□□ -1.74
CBWD3-210ENST00000614398 RPL18AQ02543 176 aaKnown RBP4.2□□□□□ -1.74
CBWD3-210ENST00000614398 LCE2AQ5TA79 106 aaPredicted RBP4.2□□□□□ -1.74
CBWD3-210ENST00000614398 Q6ZR54 194 aa4.2□□□□□ -1.74
CBWD3-210ENST00000614398 RMI2Q96E14 147 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms