RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 GAGE2DQ9UEU5 116 aa7.89□□□□□ -1.15
CSTF1-208ENST00000613138 LINC00614P0C842 121 aa7.88□□□□□ -1.15
CSTF1-208ENST00000613138 PRR3P79522 188 aaKnown RBP7.88□□□□□ -1.15
CSTF1-208ENST00000613138 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
CSTF1-208ENST00000613138 KRTAP11-1Q8IUC1 163 aa7.88□□□□□ -1.15
CSTF1-208ENST00000613138 KRTAP7-1Q8IUC3 87 aa7.88□□□□□ -1.15
CSTF1-208ENST00000613138 LINC01561Q8N1V8 128 aa7.88□□□□□ -1.15
CSTF1-208ENST00000613138 LINC00469Q8N7U9 141 aa7.88□□□□□ -1.15
CSTF1-208ENST00000613138 GEMIN7Q9H840 131 aaKnown RBP7.88□□□□□ -1.15
CSTF1-208ENST00000613138 SMIM1B2RUZ4 78 aa7.87□□□□□ -1.15
CSTF1-208ENST00000613138 SPINK8P0C7L1 97 aa7.87□□□□□ -1.15
CSTF1-208ENST00000613138 NDUFA6P56556 154 aa7.87□□□□□ -1.15
CSTF1-208ENST00000613138 HERVK_113P63121 156 aa7.87□□□□□ -1.15
CSTF1-208ENST00000613138 PMVKQ15126 192 aa7.86□□□□□ -1.15
CSTF1-208ENST00000613138 PDZD11Q5EBL8 140 aa7.86□□□□□ -1.15
CSTF1-208ENST00000613138 TINCRA0A1B0GVN0 87 aa7.85□□□□□ -1.15
CSTF1-208ENST00000613138 HBDP02042 147 aa7.85□□□□□ -1.15
CSTF1-208ENST00000613138 C9orf129Q5T035 196 aaKnown RBP7.85□□□□□ -1.15
CSTF1-208ENST00000613138 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
CSTF1-208ENST00000613138 IGLV5-45A0A087WSX0 123 aa7.84□□□□□ -1.15
CSTF1-208ENST00000613138 SCO1O75880 301 aa7.84□□□□□ -1.15
CSTF1-208ENST00000613138 TRGC2P03986 189 aa7.84□□□□□ -1.15
CSTF1-208ENST00000613138 PRSS2P07478 247 aa7.84□□□□□ -1.15
CSTF1-208ENST00000613138 TLX1NBP0CAT3 122 aa7.84□□□□□ -1.15
CSTF1-208ENST00000613138 C6orf226Q5I0X4 101 aa7.84□□□□□ -1.15
CSTF1-208ENST00000613138 Q8IZM0 81 aa7.84□□□□□ -1.15
CSTF1-208ENST00000613138 PACRGQ96M98 296 aaPredicted RBP7.84□□□□□ -1.15
CSTF1-208ENST00000613138 TRBV30A0A0K0K1B3 111 aa7.83□□□□□ -1.16
CSTF1-208ENST00000613138 CKS1BP61024 79 aa7.83□□□□□ -1.16
CSTF1-208ENST00000613138 TNXBP22105 4242 aa7.82□□□□□ -1.16
CSTF1-208ENST00000613138 IGLC3P0DOY3 106 aa7.82□□□□□ -1.16
CSTF1-208ENST00000613138 ZNF22P17026 224 aaPredicted RBP7.82□□□□□ -1.16
CSTF1-208ENST00000613138 LINC00310P59036 64 aa7.82□□□□□ -1.16
CSTF1-208ENST00000613138 ODF1Q14990 250 aa7.82□□□□□ -1.16
CSTF1-208ENST00000613138 FAM19A2Q8N3H0 131 aa7.82□□□□□ -1.16
CSTF1-208ENST00000613138 COX7B2Q8TF08 81 aa7.82□□□□□ -1.16
CSTF1-208ENST00000613138 XAGE1AQ9HD64 81 aa7.82□□□□□ -1.16
CSTF1-208ENST00000613138 C11orf86A6NJI1 115 aa7.81□□□□□ -1.16
CSTF1-208ENST00000613138 NDUFC2-KCTD14E9PQ53 114 aa7.81□□□□□ -1.16
CSTF1-208ENST00000613138 MT1HL1P0DM35 61 aa7.81□□□□□ -1.16
CSTF1-208ENST00000613138 SERTAD4-AS1Q5TG53 156 aa7.81□□□□□ -1.16
CSTF1-208ENST00000613138 PSORS1C2Q9UIG4 136 aa7.81□□□□□ -1.16
CSTF1-208ENST00000613138 COLCA2A8K830 154 aa7.8□□□□□ -1.16
CSTF1-208ENST00000613138 NUPR1O60356 82 aa7.8□□□□□ -1.16
CSTF1-208ENST00000613138 BAGE3Q86Y29 109 aa7.8□□□□□ -1.16
CSTF1-208ENST00000613138 F8VRH5 84 aa7.79□□□□□ -1.16
CSTF1-208ENST00000613138 RAB5BP61020 215 aa7.79□□□□□ -1.16
CSTF1-208ENST00000613138 M0QXV9 152 aa7.78□□□□□ -1.16
CSTF1-208ENST00000613138 CHCHD1Q96BP2 118 aaKnown RBP7.78□□□□□ -1.16
CSTF1-208ENST00000613138 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
CSTF1-208ENST00000613138 SERF1AO75920 110 aa7.77□□□□□ -1.17
CSTF1-208ENST00000613138 ATP5LO75964 103 aa7.77□□□□□ -1.17
CSTF1-208ENST00000613138 SRSF9Q13242 221 aaKnown RBP eCLIP7.77□□□□□ -1.17
CSTF1-208ENST00000613138 C1orf137Q5JT78 98 aa7.77□□□□□ -1.17
CSTF1-208ENST00000613138 SPINK6Q6UWN8 80 aa7.77□□□□□ -1.17
CSTF1-208ENST00000613138 CXCL5P42830 114 aa7.76□□□□□ -1.17
CSTF1-208ENST00000613138 IFI27L1Q96BM0 104 aa7.76□□□□□ -1.17
CSTF1-208ENST00000613138 CHTOPQ9Y3Y2 248 aaKnown RBP7.76□□□□□ -1.17
CSTF1-208ENST00000613138 H0Y8G0 127 aa7.75□□□□□ -1.17
CSTF1-208ENST00000613138 H3BRM9 83 aa7.75□□□□□ -1.17
CSTF1-208ENST00000613138 TMEM170BQ5T4T1 132 aa7.75□□□□□ -1.17
CSTF1-208ENST00000613138 REG3GQ6UW15 175 aa7.75□□□□□ -1.17
CSTF1-208ENST00000613138 ZNF625Q96I27 306 aaPredicted RBP7.75□□□□□ -1.17
CSTF1-208ENST00000613138 HSBP1O75506 76 aa7.74□□□□□ -1.17
CSTF1-208ENST00000613138 C22orf24Q9Y442 160 aa7.74□□□□□ -1.17
CSTF1-208ENST00000613138 PFN2P35080 140 aa7.73□□□□□ -1.17
CSTF1-208ENST00000613138 UBE2BP63146 152 aa7.73□□□□□ -1.17
CSTF1-208ENST00000613138 TRAV12-1A0A0B4J245 112 aa7.71□□□□□ -1.18
CSTF1-208ENST00000613138 TMEM223A0PJW6 202 aa7.71□□□□□ -1.18
CSTF1-208ENST00000613138 GAGE10A6NGK3 116 aa7.71□□□□□ -1.18
CSTF1-208ENST00000613138 IGLV7-43P04211 117 aa7.71□□□□□ -1.18
CSTF1-208ENST00000613138 FABP4P15090 132 aa7.71□□□□□ -1.18
CSTF1-208ENST00000613138 Q8NDZ9 215 aa7.71□□□□□ -1.18
CSTF1-208ENST00000613138 PMCHL2Q9BQD1 86 aa7.71□□□□□ -1.18
CSTF1-208ENST00000613138 LBHQ53QV2 105 aaPredicted RBP7.7□□□□□ -1.18
CSTF1-208ENST00000613138 LINC01600Q96MT4 127 aa7.7□□□□□ -1.18
CSTF1-208ENST00000613138 HMCN2Q8NDA2 5059 aa7.69□□□□□ -1.18
CSTF1-208ENST00000613138 A0A0U1RRA0 63 aa7.69□□□□□ -1.18
CSTF1-208ENST00000613138 RPL37AP8A6NKH3 93 aa7.69□□□□□ -1.18
CSTF1-208ENST00000613138 LEPROTL1O95214 131 aa7.69□□□□□ -1.18
CSTF1-208ENST00000613138 SFTA2Q6UW10 78 aa7.69□□□□□ -1.18
CSTF1-208ENST00000613138 ERG28Q9UKR5 140 aa7.69□□□□□ -1.18
CSTF1-208ENST00000613138 HIST1H2BKO60814 126 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 HIST1H2BJP06899 126 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 HIST1H2BOP23527 126 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 HIST1H2BBP33778 126 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 HIST1H2BDP58876 126 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 HIST1H2BCP62807 126 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 HIST2H2BEQ16778 126 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.68□□□□□ -1.18
CSTF1-208ENST00000613138 HIST1H2BHQ93079 126 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 LINC00167Q96N53 147 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 HIST1H2BNQ99877 126 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 HIST1H2BMQ99879 126 aa7.68□□□□□ -1.18
CSTF1-208ENST00000613138 MRPL55Q7Z7F7 128 aaKnown RBP7.67□□□□□ -1.18
CSTF1-208ENST00000613138 DIRC1Q969H9 104 aa7.67□□□□□ -1.18
CSTF1-208ENST00000613138 SND1-IT1Q9HBX3 110 aa7.67□□□□□ -1.18
CSTF1-208ENST00000613138 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
CSTF1-208ENST00000613138 TP73-AS1Q9UF72 201 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms