RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 Q8N814 137 aa14.31□□□□□ -0.12
CTDP1-208ENST00000613122 C2CD3Q4AC94 2353 aa14.31□□□□□ -0.12
CTDP1-208ENST00000613122 AMELXQ99217 191 aa14.3□□□□□ -0.12
CTDP1-208ENST00000613122 CPAMD8Q8IZJ3 1885 aa14.3□□□□□ -0.12
CTDP1-208ENST00000613122 EXPH5Q8NEV8 1989 aa14.3□□□□□ -0.12
CTDP1-208ENST00000613122 Q6JHZ5 121 aa14.28□□□□□ -0.12
CTDP1-208ENST00000613122 ESRGQ1W209 222 aa14.28□□□□□ -0.12
CTDP1-208ENST00000613122 FAM30AQ9NZY2 134 aa14.28□□□□□ -0.12
CTDP1-208ENST00000613122 Q9BRP9 147 aa14.27□□□□□ -0.12
CTDP1-208ENST00000613122 MYO9AB2RTY4 2548 aa14.27□□□□□ -0.12
CTDP1-208ENST00000613122 DOPEY1Q5JWR5 2465 aa14.27□□□□□ -0.13
CTDP1-208ENST00000613122 NDUFC1O43677 76 aa14.27□□□□□ -0.13
CTDP1-208ENST00000613122 Q6ZVQ6 151 aa14.27□□□□□ -0.13
CTDP1-208ENST00000613122 PRYO14603 147 aa14.26□□□□□ -0.13
CTDP1-208ENST00000613122 SNURFQ9Y675 71 aa14.26□□□□□ -0.13
CTDP1-208ENST00000613122 CELA1Q9UNI1 258 aa14.25□□□□□ -0.13
CTDP1-208ENST00000613122 JMJD1CQ15652 2540 aa14.25□□□□□ -0.13
CTDP1-208ENST00000613122 IMUPQ9GZP8 106 aa14.25□□□□□ -0.13
CTDP1-208ENST00000613122 SERP2Q8N6R1 65 aa14.24□□□□□ -0.13
CTDP1-208ENST00000613122 MDFIQ99750 246 aa14.24□□□□□ -0.13
CTDP1-208ENST00000613122 URB1-AS1Q96HZ7 61 aa14.24□□□□□ -0.13
CTDP1-208ENST00000613122 IGHV6-1A0A0B4J1U7 121 aa14.24□□□□□ -0.13
CTDP1-208ENST00000613122 LINC01561Q8N1V8 128 aa14.24□□□□□ -0.13
CTDP1-208ENST00000613122 ATP5EP56381 51 aaPredicted RBP14.23□□□□□ -0.13
CTDP1-208ENST00000613122 TSPEAR-AS2P59090 65 aa14.23□□□□□ -0.13
CTDP1-208ENST00000613122 V9GYY9 64 aa14.22□□□□□ -0.13
CTDP1-208ENST00000613122 PRR4Q16378 134 aa14.22□□□□□ -0.13
CTDP1-208ENST00000613122 Q6ZRU5 148 aa14.22□□□□□ -0.13
CTDP1-208ENST00000613122 A0A087WYN8 130 aa14.2□□□□□ -0.14
CTDP1-208ENST00000613122 CHD8Q9HCK8 2581 aa14.2□□□□□ -0.14
CTDP1-208ENST00000613122 ADAMTSL4-AS1Q5T5F5 129 aa14.19□□□□□ -0.14
CTDP1-208ENST00000613122 KRTAP24-1Q3LI83 254 aa14.17□□□□□ -0.14
CTDP1-208ENST00000613122 C11orf72Q8NBR9 251 aa14.16□□□□□ -0.14
CTDP1-208ENST00000613122 FAM240AA0A1B0GVK7 77 aa14.16□□□□□ -0.14
CTDP1-208ENST00000613122 EML5Q05BV3 1969 aa14.16□□□□□ -0.14
CTDP1-208ENST00000613122 LINC00310P59036 64 aa14.15□□□□□ -0.14
CTDP1-208ENST00000613122 LIMD2Q9BT23 127 aa14.14□□□□□ -0.15
CTDP1-208ENST00000613122 ABCA12Q86UK0 2595 aa14.13□□□□□ -0.15
CTDP1-208ENST00000613122 RETNLBQ9BQ08 111 aa14.13□□□□□ -0.15
CTDP1-208ENST00000613122 PRLHP81277 87 aa14.13□□□□□ -0.15
CTDP1-208ENST00000613122 A0A087WSZ3 146 aa14.13□□□□□ -0.15
CTDP1-208ENST00000613122 C22orf24Q9Y442 160 aa14.13□□□□□ -0.15
CTDP1-208ENST00000613122 ZFYVE26Q68DK2 2539 aa14.12□□□□□ -0.15
CTDP1-208ENST00000613122 LRRK2Q5S007 2527 aa14.12□□□□□ -0.15
CTDP1-208ENST00000613122 LINC00208Q96KT6 92 aa14.1□□□□□ -0.15
CTDP1-208ENST00000613122 SBSPONQ8IVN8 264 aa14.1□□□□□ -0.15
CTDP1-208ENST00000613122 LINC01547P58512 204 aaPredicted RBP14.09□□□□□ -0.15
CTDP1-208ENST00000613122 LINC00575Q6W349 94 aa14.08□□□□□ -0.16
CTDP1-208ENST00000613122 COX7CP15954 63 aa14.08□□□□□ -0.16
CTDP1-208ENST00000613122 SMCR5Q8TEV8 140 aa14.08□□□□□ -0.16
CTDP1-208ENST00000613122 KIF25-AS1Q9Y6Z4 181 aa14.07□□□□□ -0.16
CTDP1-208ENST00000613122 A6NED7 52 aa14.07□□□□□ -0.16
CTDP1-208ENST00000613122 COL4A2P08572 1712 aa14.06□□□□□ -0.16
CTDP1-208ENST00000613122 A0A096LNJ9 63 aa14.06□□□□□ -0.16
CTDP1-208ENST00000613122 AGRNO00468 2067 aa14.05□□□□□ -0.16
CTDP1-208ENST00000613122 X6R8D5 127 aa14.05□□□□□ -0.16
CTDP1-208ENST00000613122 A8MTW9 85 aa14.04□□□□□ -0.16
CTDP1-208ENST00000613122 H3BNG1 76 aa14.03□□□□□ -0.16
CTDP1-208ENST00000613122 XGP55808 180 aa14.03□□□□□ -0.16
CTDP1-208ENST00000613122 LINC00337Q8N6G1 96 aa14.03□□□□□ -0.16
CTDP1-208ENST00000613122 TRAV7A0A075B6U4 112 aa14.03□□□□□ -0.16
CTDP1-208ENST00000613122 DEFB116Q30KQ4 102 aa14.02□□□□□ -0.16
CTDP1-208ENST00000613122 EP400Q96L91 3159 aa14.02□□□□□ -0.17
CTDP1-208ENST00000613122 ZNF462Q96JM2 2506 aa14.01□□□□□ -0.17
CTDP1-208ENST00000613122 TET2Q6N021 2002 aaPredicted RBP14.01□□□□□ -0.17
CTDP1-208ENST00000613122 ANKRD11Q6UB99 2663 aaPredicted RBP14□□□□□ -0.17
CTDP1-208ENST00000613122 FAM19A4Q96LR4 140 aa14□□□□□ -0.17
CTDP1-208ENST00000613122 FN1P02751 2386 aaKnown RBP14□□□□□ -0.17
CTDP1-208ENST00000613122 TRBV7-6A0A0J9YX20 115 aa14□□□□□ -0.17
CTDP1-208ENST00000613122 USP9XQ93008 2570 aaPredicted RBP13.98□□□□□ -0.17
CTDP1-208ENST00000613122 TLN2Q9Y4G6 2542 aa13.98□□□□□ -0.17
CTDP1-208ENST00000613122 FAM229AH3BQW9 127 aa13.97□□□□□ -0.17
CTDP1-208ENST00000613122 CEP295Q9C0D2 2601 aa13.97□□□□□ -0.17
CTDP1-208ENST00000613122 PCOTHQ58A44 107 aa13.97□□□□□ -0.17
CTDP1-208ENST00000613122 A0A087WVE0 104 aa13.97□□□□□ -0.17
CTDP1-208ENST00000613122 IGHV3OR16-9A0A0B4J2B5 98 aa13.97□□□□□ -0.17
CTDP1-208ENST00000613122 LINC00315P59091 139 aa13.96□□□□□ -0.17
CTDP1-208ENST00000613122 Q8N3U1 123 aa13.96□□□□□ -0.17
CTDP1-208ENST00000613122 IGLV5-39A0A0G2JS06 123 aa13.96□□□□□ -0.18
CTDP1-208ENST00000613122 LINC00167Q96N53 147 aa13.95□□□□□ -0.18
CTDP1-208ENST00000613122 Q6Q795 121 aa13.94□□□□□ -0.18
CTDP1-208ENST00000613122 NBDYA0A0U1RRE5 68 aa13.94□□□□□ -0.18
CTDP1-208ENST00000613122 H0Y9P7 68 aa13.93□□□□□ -0.18
CTDP1-208ENST00000613122 CCDC179H3BU77 68 aa13.93□□□□□ -0.18
CTDP1-208ENST00000613122 SPINK1P00995 79 aa13.93□□□□□ -0.18
CTDP1-208ENST00000613122 HCG22E2RYF7 251 aa13.93□□□□□ -0.18
CTDP1-208ENST00000613122 C6orf48Q9UBA6 75 aa13.93□□□□□ -0.18
CTDP1-208ENST00000613122 RTL8CO15255 209 aa13.92□□□□□ -0.18
CTDP1-208ENST00000613122 A0A0U1RQV1 116 aa13.92□□□□□ -0.18
CTDP1-208ENST00000613122 SPACA4Q8TDM5 124 aa13.92□□□□□ -0.18
CTDP1-208ENST00000613122 WDR87Q6ZQQ6 2873 aa13.92□□□□□ -0.18
CTDP1-208ENST00000613122 WWC2-AS2Q96NR7 200 aa13.91□□□□□ -0.18
CTDP1-208ENST00000613122 KIAA0087Q14695 138 aa13.9□□□□□ -0.18
CTDP1-208ENST00000613122 MOBPQ13875 183 aa13.9□□□□□ -0.18
CTDP1-208ENST00000613122 C16orf90A8MZG2 172 aa13.9□□□□□ -0.18
CTDP1-208ENST00000613122 Q8NAQ8 132 aa13.88□□□□□ -0.19
CTDP1-208ENST00000613122 LINC01546A6NGU7 62 aa13.87□□□□□ -0.19
CTDP1-208ENST00000613122 LINC00588Q9Y4M8 146 aa13.86□□□□□ -0.19
CTDP1-208ENST00000613122 FASNP49327 2511 aaKnown RBP13.86□□□□□ -0.19
CTDP1-208ENST00000613122 TRBV7-7A0A0K0K1E9 115 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms