RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 PRELID3AQ96N28 172 aa13.51□□□□□ -0.25
MMP28-203ENST00000612672 GAGE10A6NGK3 116 aa13.5□□□□□ -0.25
MMP28-203ENST00000612672 F8W036 122 aa13.5□□□□□ -0.25
MMP28-203ENST00000612672 PPBPP02775 128 aa13.5□□□□□ -0.25
MMP28-203ENST00000612672 TMEM136Q6ZRR5 245 aa13.5□□□□□ -0.25
MMP28-203ENST00000612672 ALKBH7Q9BT30 221 aaPredicted RBP13.5□□□□□ -0.25
MMP28-203ENST00000612672 NAT8Q9UHE5 227 aa13.5□□□□□ -0.25
MMP28-203ENST00000612672 IGLV7-46A0A075B6I9 117 aa13.49□□□□□ -0.25
MMP28-203ENST00000612672 LOC389332A0A1B0GUA5 103 aa13.49□□□□□ -0.25
MMP28-203ENST00000612672 FAM19A3Q7Z5A8 133 aa13.49□□□□□ -0.25
MMP28-203ENST00000612672 C2orf88Q9BSF0 95 aa13.49□□□□□ -0.25
MMP28-203ENST00000612672 CDKN2A-AS1Q9UH64 79 aa13.49□□□□□ -0.25
MMP28-203ENST00000612672 SRSF3P84103 164 aaKnown RBP13.48□□□□□ -0.25
MMP28-203ENST00000612672 C2orf66Q6UXQ4 117 aa13.48□□□□□ -0.25
MMP28-203ENST00000612672 F8VRH5 84 aa13.47□□□□□ -0.25
MMP28-203ENST00000612672 PRSS47A8MTI9 375 aa13.46□□□□□ -0.25
MMP28-203ENST00000612672 S100A8P05109 93 aa13.46□□□□□ -0.25
MMP28-203ENST00000612672 SCO1O75880 301 aa13.45□□□□□ -0.26
MMP28-203ENST00000612672 FAM229BQ4G0N7 80 aa13.45□□□□□ -0.26
MMP28-203ENST00000612672 CYSLTR1Q9Y271 337 aa13.45□□□□□ -0.26
MMP28-203ENST00000612672 IGIPA6NJ69 53 aa13.44□□□□□ -0.26
MMP28-203ENST00000612672 VCX2Q9H322 139 aa13.44□□□□□ -0.26
MMP28-203ENST00000612672 FSIP2Q5CZC0 6907 aa13.43□□□□□ -0.26
MMP28-203ENST00000612672 PNRC1Q12796 327 aaPredicted RBP13.42□□□□□ -0.26
MMP28-203ENST00000612672 IGLV5-37A0A075B6J1 123 aa13.41□□□□□ -0.26
MMP28-203ENST00000612672 UBE2AP49459 152 aa13.41□□□□□ -0.26
MMP28-203ENST00000612672 Q8N8P6 123 aa13.41□□□□□ -0.26
MMP28-203ENST00000612672 KRTAP4-1Q9BYQ7 146 aa13.4□□□□□ -0.26
MMP28-203ENST00000612672 PPDPFQ9H3Y8 114 aa13.4□□□□□ -0.26
MMP28-203ENST00000612672 MAP1LC3AQ9H492 121 aa13.4□□□□□ -0.26
MMP28-203ENST00000612672 SMIM1B2RUZ4 78 aa13.39□□□□□ -0.27
MMP28-203ENST00000612672 C3orf22Q8N5N4 141 aa13.39□□□□□ -0.27
MMP28-203ENST00000612672 HERVK_113P63121 156 aa13.38□□□□□ -0.27
MMP28-203ENST00000612672 PRLHP81277 87 aa13.38□□□□□ -0.27
MMP28-203ENST00000612672 ATP5L2Q7Z4Y8 100 aa13.38□□□□□ -0.27
MMP28-203ENST00000612672 IGKV2-28A0A075B6P5 120 aa13.37□□□□□ -0.27
MMP28-203ENST00000612672 IGKV2D-28P01615 120 aa13.37□□□□□ -0.27
MMP28-203ENST00000612672 PEA15Q15121 130 aa13.37□□□□□ -0.27
MMP28-203ENST00000612672 IGKV2D-26A0A0A0MRZ7 120 aa13.36□□□□□ -0.27
MMP28-203ENST00000612672 NPSP0C0P6 89 aa13.36□□□□□ -0.27
MMP28-203ENST00000612672 CXCL5P42830 114 aa13.35□□□□□ -0.27
MMP28-203ENST00000612672 LAMTOR2Q9Y2Q5 125 aa13.35□□□□□ -0.27
MMP28-203ENST00000612672 RAB5BP61020 215 aa13.34□□□□□ -0.27
MMP28-203ENST00000612672 ORMDL2Q53FV1 153 aa13.34□□□□□ -0.27
MMP28-203ENST00000612672 GEMIN7Q9H840 131 aaKnown RBP13.34□□□□□ -0.27
MMP28-203ENST00000612672 COX7B2Q8TF08 81 aa13.33□□□□□ -0.28
MMP28-203ENST00000612672 TMEM238C9JI98 176 aa13.32□□□□□ -0.28
MMP28-203ENST00000612672 NKAPP1Q8N9T2 125 aa13.32□□□□□ -0.28
MMP28-203ENST00000612672 CRCT1Q9UGL9 99 aa13.32□□□□□ -0.28
MMP28-203ENST00000612672 SEC11AP67812 179 aa13.3□□□□□ -0.28
MMP28-203ENST00000612672 PDZD11Q5EBL8 140 aa13.29□□□□□ -0.28
MMP28-203ENST00000612672 TIMM17AQ99595 171 aa13.29□□□□□ -0.28
MMP28-203ENST00000612672 CTAG1AP78358 180 aa13.28□□□□□ -0.28
MMP28-203ENST00000612672 IFITM2Q01629 132 aa13.28□□□□□ -0.28
MMP28-203ENST00000612672 KRTAP13-3Q3SY46 172 aa13.28□□□□□ -0.28
MMP28-203ENST00000612672 FAM19A1Q7Z5A9 133 aa13.28□□□□□ -0.28
MMP28-203ENST00000612672 PLEKHB2Q96CS7 222 aa13.28□□□□□ -0.28
MMP28-203ENST00000612672 TMEM126AQ9H061 195 aa13.28□□□□□ -0.28
MMP28-203ENST00000612672 IGLV5-45A0A087WSX0 123 aa13.27□□□□□ -0.29
MMP28-203ENST00000612672 SPINK8P0C7L1 97 aa13.27□□□□□ -0.29
MMP28-203ENST00000612672 ADCYAP1P18509 176 aa13.27□□□□□ -0.29
MMP28-203ENST00000612672 Q8NDZ9 215 aa13.27□□□□□ -0.29
MMP28-203ENST00000612672 TOMM6Q96B49 74 aa13.27□□□□□ -0.29
MMP28-203ENST00000612672 M0R378 163 aa13.26□□□□□ -0.29
MMP28-203ENST00000612672 VPREB1P12018 145 aa13.26□□□□□ -0.29
MMP28-203ENST00000612672 ASB16-AS1Q495Z4 193 aa13.26□□□□□ -0.29
MMP28-203ENST00000612672 TINCRA0A1B0GVN0 87 aa13.24□□□□□ -0.29
MMP28-203ENST00000612672 K7EMI3 77 aa13.24□□□□□ -0.29
MMP28-203ENST00000612672 LINC01547P58512 204 aaPredicted RBP13.24□□□□□ -0.29
MMP28-203ENST00000612672 RAB14P61106 215 aa13.24□□□□□ -0.29
MMP28-203ENST00000612672 PAPPA-AS1Q5QFB9 102 aa13.23□□□□□ -0.29
MMP28-203ENST00000612672 NXT2Q9NPJ8 142 aaKnown RBP13.23□□□□□ -0.29
MMP28-203ENST00000612672 CLLU1Q5K131 121 aa13.22□□□□□ -0.29
MMP28-203ENST00000612672 FP248Q71RG6 208 aaPredicted RBP13.21□□□□□ -0.29
MMP28-203ENST00000612672 PFN2P35080 140 aa13.2□□□□□ -0.3
MMP28-203ENST00000612672 ERASQ7Z444 233 aa13.2□□□□□ -0.3
MMP28-203ENST00000612672 SCGB3A1Q96QR1 104 aa13.19□□□□□ -0.3
MMP28-203ENST00000612672 CBLN2Q8IUK8 224 aa13.18□□□□□ -0.3
MMP28-203ENST00000612672 SND1-IT1Q9HBX3 110 aa13.18□□□□□ -0.3
MMP28-203ENST00000612672 DAND5Q8N907 189 aa13.17□□□□□ -0.3
MMP28-203ENST00000612672 SPRR4Q96PI1 79 aa13.17□□□□□ -0.3
MMP28-203ENST00000612672 HIGD2AQ9BW72 106 aa13.17□□□□□ -0.3
MMP28-203ENST00000612672 KIAA1644Q3SXP7 199 aa13.16□□□□□ -0.3
MMP28-203ENST00000612672 SPAG11AQ6PDA7 123 aa13.16□□□□□ -0.3
MMP28-203ENST00000612672 LINC00337Q8N6G1 96 aa13.16□□□□□ -0.3
MMP28-203ENST00000612672 CST9LQ9H4G1 147 aa13.16□□□□□ -0.3
MMP28-203ENST00000612672 LCE2CQ5TA81 110 aa13.15□□□□□ -0.3
MMP28-203ENST00000612672 ATP5LO75964 103 aa13.14□□□□□ -0.31
MMP28-203ENST00000612672 Q8NBF4 154 aa13.13□□□□□ -0.31
MMP28-203ENST00000612672 KRTAP3-3Q9BYR6 98 aa13.13□□□□□ -0.31
MMP28-203ENST00000612672 KRTAP3-2Q9BYR7 98 aa13.13□□□□□ -0.31
MMP28-203ENST00000612672 IGLV5-39A0A0G2JS06 123 aa13.11□□□□□ -0.31
MMP28-203ENST00000612672 G0S2P27469 103 aa13.1□□□□□ -0.31
MMP28-203ENST00000612672 GNB1LQ9BYB4 327 aa13.1□□□□□ -0.31
MMP28-203ENST00000612672 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
MMP28-203ENST00000612672 ANAPC16Q96DE5 110 aa13.09□□□□□ -0.31
MMP28-203ENST00000612672 PMVKQ15126 192 aa13.08□□□□□ -0.32
MMP28-203ENST00000612672 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
MMP28-203ENST00000612672 LINC01546A6NGU7 62 aa13.07□□□□□ -0.32
MMP28-203ENST00000612672 SEC61BP60468 96 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms