RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 TMEM223A0PJW6 202 aa7.72□□□□□ -1.17
PCDHGC3-202ENST00000611950 RBMY1BA6NDE4 496 aaKnown RBP7.72□□□□□ -1.17
PCDHGC3-202ENST00000611950 RBMY1EA6NEQ0 496 aaKnown RBP7.72□□□□□ -1.17
PCDHGC3-202ENST00000611950 RBMY1DP0C7P1 496 aaKnown RBP7.72□□□□□ -1.17
PCDHGC3-202ENST00000611950 LYPD5Q6UWN5 251 aa7.72□□□□□ -1.17
PCDHGC3-202ENST00000611950 LINC00528Q8N1L1 170 aa7.72□□□□□ -1.17
PCDHGC3-202ENST00000611950 ZNF625Q96I27 306 aaPredicted RBP7.72□□□□□ -1.17
PCDHGC3-202ENST00000611950 TM2D3Q9BRN9 247 aa7.72□□□□□ -1.17
PCDHGC3-202ENST00000611950 H7C423 109 aa7.71□□□□□ -1.17
PCDHGC3-202ENST00000611950 FSHBP01225 129 aa7.71□□□□□ -1.17
PCDHGC3-202ENST00000611950 TMEM61Q8N0U2 210 aa7.71□□□□□ -1.17
PCDHGC3-202ENST00000611950 IGHV3-30-3P0DP02 117 aa7.71□□□□□ -1.18
PCDHGC3-202ENST00000611950 RHOHQ15669 191 aa7.71□□□□□ -1.18
PCDHGC3-202ENST00000611950 A0A0B4J2C4 111 aa7.7□□□□□ -1.18
PCDHGC3-202ENST00000611950 TRBV6-5A0A0K0K1A5 114 aa7.7□□□□□ -1.18
PCDHGC3-202ENST00000611950 IGHV3-53P01767 116 aa7.7□□□□□ -1.18
PCDHGC3-202ENST00000611950 Q6YL49 198 aa7.7□□□□□ -1.18
PCDHGC3-202ENST00000611950 TIMM21Q9BVV7 248 aa7.7□□□□□ -1.18
PCDHGC3-202ENST00000611950 XCL2Q9UBD3 114 aa7.7□□□□□ -1.18
PCDHGC3-202ENST00000611950 CCKP06307 115 aa7.7□□□□□ -1.18
PCDHGC3-202ENST00000611950 IGHV4-31P0DP07 118 aa7.7□□□□□ -1.18
PCDHGC3-202ENST00000611950 ADAMTSL4-AS1Q5T5F5 129 aa7.7□□□□□ -1.18
PCDHGC3-202ENST00000611950 A0A0J9YXY3 114 aa7.69□□□□□ -1.18
PCDHGC3-202ENST00000611950 LEPROTO15243 131 aa7.69□□□□□ -1.18
PCDHGC3-202ENST00000611950 C8orf87E5RJ46 101 aa7.69□□□□□ -1.18
PCDHGC3-202ENST00000611950 IGHV3-33P01772 117 aa7.69□□□□□ -1.18
PCDHGC3-202ENST00000611950 H7BZZ5 65 aa7.68□□□□□ -1.18
PCDHGC3-202ENST00000611950 FAM104AQ969W3 186 aa7.68□□□□□ -1.18
PCDHGC3-202ENST00000611950 LINC00467Q9BRT7 94 aa7.68□□□□□ -1.18
PCDHGC3-202ENST00000611950 C11orf68Q9H3H3 251 aaKnown RBP7.68□□□□□ -1.18
PCDHGC3-202ENST00000611950 NDUFA12Q9UI09 145 aa7.67□□□□□ -1.18
PCDHGC3-202ENST00000611950 USP17L23D6RBM5 183 aa7.67□□□□□ -1.18
PCDHGC3-202ENST00000611950 RBM3P98179 157 aaKnown RBP7.67□□□□□ -1.18
PCDHGC3-202ENST00000611950 DYNLRB2Q8TF09 96 aa7.67□□□□□ -1.18
PCDHGC3-202ENST00000611950 TMEM263Q8WUH6 116 aaKnown RBP7.67□□□□□ -1.18
PCDHGC3-202ENST00000611950 SERTAD4-AS1Q5TG53 156 aa7.66□□□□□ -1.18
PCDHGC3-202ENST00000611950 Q8N2B8 174 aa7.66□□□□□ -1.18
PCDHGC3-202ENST00000611950 IGHV1-58A0A0C4DH39 117 aa7.66□□□□□ -1.18
PCDHGC3-202ENST00000611950 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.66□□□□□ -1.18
PCDHGC3-202ENST00000611950 CLEC2BQ92478 149 aa7.66□□□□□ -1.18
PCDHGC3-202ENST00000611950 TENM1Q9UKZ4 2725 aa7.66□□□□□ -1.18
PCDHGC3-202ENST00000611950 CCL24O00175 119 aa7.65□□□□□ -1.18
PCDHGC3-202ENST00000611950 TRIAP1O43715 76 aa7.65□□□□□ -1.18
PCDHGC3-202ENST00000611950 XCL1P47992 114 aa7.65□□□□□ -1.18
PCDHGC3-202ENST00000611950 BEAN1Q3B7T3 259 aa7.65□□□□□ -1.18
PCDHGC3-202ENST00000611950 CDKN2A-AS1Q9UH64 79 aa7.65□□□□□ -1.18
PCDHGC3-202ENST00000611950 KTN1-AS1Q86SY8 53 aa7.64□□□□□ -1.19
PCDHGC3-202ENST00000611950 MAP6D1Q9H9H5 199 aa7.64□□□□□ -1.19
PCDHGC3-202ENST00000611950 TRGV1A0A0A0MS02 117 aa7.64□□□□□ -1.19
PCDHGC3-202ENST00000611950 IGKV3OR2-268A0A0C4DH90 116 aa7.64□□□□□ -1.19
PCDHGC3-202ENST00000611950 DAD1P61803 113 aa7.64□□□□□ -1.19
PCDHGC3-202ENST00000611950 CHCHD7Q9BUK0 85 aa7.64□□□□□ -1.19
PCDHGC3-202ENST00000611950 MGAM2Q2M2H8 2515 aa7.63□□□□□ -1.19
PCDHGC3-202ENST00000611950 TRBV30A0A0K0K1B3 111 aa7.63□□□□□ -1.19
PCDHGC3-202ENST00000611950 UBE2D4Q9Y2X8 147 aa7.63□□□□□ -1.19
PCDHGC3-202ENST00000611950 ANK2Q01484 3957 aa7.63□□□□□ -1.19
PCDHGC3-202ENST00000611950 COX6A2Q02221 97 aa7.63□□□□□ -1.19
PCDHGC3-202ENST00000611950 C20orf197Q8N268 126 aa7.63□□□□□ -1.19
PCDHGC3-202ENST00000611950 LITAFQ99732 161 aa7.63□□□□□ -1.19
PCDHGC3-202ENST00000611950 MPLKIPQ8TAP9 179 aa7.62□□□□□ -1.19
PCDHGC3-202ENST00000611950 WFDC10AQ9H1F0 79 aa7.62□□□□□ -1.19
PCDHGC3-202ENST00000611950 A8MTW9 85 aa7.61□□□□□ -1.19
PCDHGC3-202ENST00000611950 VSIG2Q96IQ7 327 aa7.61□□□□□ -1.19
PCDHGC3-202ENST00000611950 S100A7L2Q5SY68 101 aa7.6□□□□□ -1.19
PCDHGC3-202ENST00000611950 VWFP04275 2813 aa7.6□□□□□ -1.19
PCDHGC3-202ENST00000611950 Q6ZTI0 123 aa7.6□□□□□ -1.19
PCDHGC3-202ENST00000611950 C11orf72Q8NBR9 251 aa7.6□□□□□ -1.19
PCDHGC3-202ENST00000611950 C4orf3Q8WVX3 66 aa7.6□□□□□ -1.19
PCDHGC3-202ENST00000611950 ICOSQ9Y6W8 199 aa7.6□□□□□ -1.19
PCDHGC3-202ENST00000611950 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.6□□□□□ -1.19
PCDHGC3-202ENST00000611950 M0R378 163 aa7.6□□□□□ -1.19
PCDHGC3-202ENST00000611950 Q9H8V8 135 aa7.6□□□□□ -1.19
PCDHGC3-202ENST00000611950 TGP01266 2768 aa7.59□□□□□ -1.19
PCDHGC3-202ENST00000611950 A0A087WVE0 104 aa7.59□□□□□ -1.19
PCDHGC3-202ENST00000611950 INSP01308 110 aa7.59□□□□□ -1.19
PCDHGC3-202ENST00000611950 INAFM2P0DMQ5 153 aa7.59□□□□□ -1.19
PCDHGC3-202ENST00000611950 ODF3L2Q3SX64 289 aa7.59□□□□□ -1.19
PCDHGC3-202ENST00000611950 MEGF8Q7Z7M0 2845 aa7.59□□□□□ -1.2
PCDHGC3-202ENST00000611950 DEFB114Q30KQ6 69 aa7.58□□□□□ -1.2
PCDHGC3-202ENST00000611950 X6R8D5 127 aa7.58□□□□□ -1.2
PCDHGC3-202ENST00000611950 LOC100131303A0A0U1RQF7 123 aa7.58□□□□□ -1.2
PCDHGC3-202ENST00000611950 MIAQ16674 131 aa7.58□□□□□ -1.2
PCDHGC3-202ENST00000611950 PKD1L1Q8TDX9 2849 aa7.57□□□□□ -1.2
PCDHGC3-202ENST00000611950 Q6JHZ5 121 aa7.57□□□□□ -1.2
PCDHGC3-202ENST00000611950 SOSTDC1Q6X4U4 206 aa7.57□□□□□ -1.2
PCDHGC3-202ENST00000611950 NOP10Q9NPE3 64 aaKnown RBP7.57□□□□□ -1.2
PCDHGC3-202ENST00000611950 PLA2G2DQ9UNK4 145 aa7.57□□□□□ -1.2
PCDHGC3-202ENST00000611950 FAM229BQ4G0N7 80 aa7.56□□□□□ -1.2
PCDHGC3-202ENST00000611950 IBA57-AS1B1ANH7 110 aa7.56□□□□□ -1.2
PCDHGC3-202ENST00000611950 LST1O00453 97 aa7.56□□□□□ -1.2
PCDHGC3-202ENST00000611950 TOMM7Q9P0U1 55 aa7.56□□□□□ -1.2
PCDHGC3-202ENST00000611950 IGKV3D-7A0A0C4DH55 119 aa7.55□□□□□ -1.2
PCDHGC3-202ENST00000611950 ATP5EP56381 51 aaPredicted RBP7.55□□□□□ -1.2
PCDHGC3-202ENST00000611950 PIK3CD-AS1Q5SR53 167 aa7.55□□□□□ -1.2
PCDHGC3-202ENST00000611950 LINC00242Q5T6M2 205 aa7.55□□□□□ -1.2
PCDHGC3-202ENST00000611950 NTM-AS1Q6ZSK4 140 aa7.55□□□□□ -1.2
PCDHGC3-202ENST00000611950 KLKP1Q107X0 134 aa7.55□□□□□ -1.2
PCDHGC3-202ENST00000611950 DNAJC9-AS1A6NH13 148 aa7.54□□□□□ -1.2
PCDHGC3-202ENST00000611950 COX6CP09669 75 aa7.54□□□□□ -1.2
PCDHGC3-202ENST00000611950 LINC00588Q9Y4M8 146 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms