RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 NAV2Q8IVL1 2488 aa3.29□□□□□ -1.88
HDDC2-208ENST00000609021 KRTAP16-1A8MUX0 517 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 MRPL33O75394 65 aaKnown RBP3.28□□□□□ -1.88
HDDC2-208ENST00000609021 ELOF1P60002 83 aaKnown RBP3.28□□□□□ -1.88
HDDC2-208ENST00000609021 IGFL4Q6B9Z1 124 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 TMEM105Q8N8V8 129 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 IGLV4-3A0A075B6K6 122 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 IGHV1-2P23083 117 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 POLR2KP53803 58 aaKnown RBP3.28□□□□□ -1.88
HDDC2-208ENST00000609021 ASB16-AS1Q495Z4 193 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 CNEP1R1Q8N9A8 125 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 TMEM167AQ8TBQ9 72 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 PATE1Q8WXA2 126 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 C19orf73Q9NVV2 129 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 DSPP15924 2871 aaKnown RBP3.28□□□□□ -1.88
HDDC2-208ENST00000609021 CMYA5Q8N3K9 4069 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 MYO9AB2RTY4 2548 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 IGHV3-16A0A0C4DH30 117 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 NDUFA4O00483 81 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 DEFB112Q30KQ8 113 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 COX7B2Q8TF08 81 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 DEFB126Q9BYW3 111 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 OCR1Q9BZK8 76 aa3.28□□□□□ -1.88
HDDC2-208ENST00000609021 HRNRQ86YZ3 2850 aaPredicted RBP3.27□□□□□ -1.89
HDDC2-208ENST00000609021 NAV3Q8IVL0 2385 aa3.27□□□□□ -1.89
HDDC2-208ENST00000609021 IGHV4OR15-8A0A075B7B6 117 aa3.27□□□□□ -1.89
HDDC2-208ENST00000609021 A0A087WW49 117 aa3.27□□□□□ -1.89
HDDC2-208ENST00000609021 IGHV3-49A0A0A0MS15 119 aa3.27□□□□□ -1.89
HDDC2-208ENST00000609021 C9orf66Q5T8R8 295 aa3.27□□□□□ -1.89
HDDC2-208ENST00000609021 S4R3C0 116 aa3.27□□□□□ -1.89
HDDC2-208ENST00000609021 IGHV7-4-1A0A0J9YVY3 117 aa3.27□□□□□ -1.89
HDDC2-208ENST00000609021 KLK9Q9UKQ9 250 aa3.27□□□□□ -1.89
HDDC2-208ENST00000609021 COL6A6A6NMZ7 2263 aa3.27□□□□□ -1.89
HDDC2-208ENST00000609021 ABCA12Q86UK0 2595 aa3.26□□□□□ -1.89
HDDC2-208ENST00000609021 SPTBN1Q01082 2364 aaKnown RBP3.26□□□□□ -1.89
HDDC2-208ENST00000609021 IGHV3-38A0A0C4DH36 116 aa3.26□□□□□ -1.89
HDDC2-208ENST00000609021 H3BQ85 93 aa3.26□□□□□ -1.89
HDDC2-208ENST00000609021 SUMO4Q6EEV6 95 aa3.26□□□□□ -1.89
HDDC2-208ENST00000609021 Q6ZQT0 140 aa3.26□□□□□ -1.89
HDDC2-208ENST00000609021 ANKRD17O75179 2603 aaKnown RBP3.26□□□□□ -1.89
HDDC2-208ENST00000609021 IGHV3-73A0A0B4J1V6 119 aa3.26□□□□□ -1.89
HDDC2-208ENST00000609021 ETDCA0A1B0GVM5 59 aa3.26□□□□□ -1.89
HDDC2-208ENST00000609021 RNASE3P12724 160 aaKnown RBP3.26□□□□□ -1.89
HDDC2-208ENST00000609021 LMO4P61968 165 aa3.26□□□□□ -1.89
HDDC2-208ENST00000609021 REG3GQ6UW15 175 aa3.26□□□□□ -1.89
HDDC2-208ENST00000609021 CDKN2A-AS1Q9UH64 79 aa3.26□□□□□ -1.89
HDDC2-208ENST00000609021 CDK2AP2O75956 126 aa3.25□□□□□ -1.89
HDDC2-208ENST00000609021 SEC61BP60468 96 aaKnown RBP3.25□□□□□ -1.89
HDDC2-208ENST00000609021 ADM2Q7Z4H4 148 aa3.25□□□□□ -1.89
HDDC2-208ENST00000609021 ZNF575Q86XF7 245 aa3.25□□□□□ -1.89
HDDC2-208ENST00000609021 ZNF702PQ9H963 129 aa3.25□□□□□ -1.89
HDDC2-208ENST00000609021 TOMM7Q9P0U1 55 aa3.25□□□□□ -1.89
HDDC2-208ENST00000609021 PTPN13Q12923 2485 aa3.25□□□□□ -1.89
HDDC2-208ENST00000609021 PKDREJQ9NTG1 2253 aa3.25□□□□□ -1.89
HDDC2-208ENST00000609021 FAM208BQ5VWN6 2430 aa3.25□□□□□ -1.89
HDDC2-208ENST00000609021 TRGV2A0A075B6R0 118 aa3.25□□□□□ -1.89
HDDC2-208ENST00000609021 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.25□□□□□ -1.89
HDDC2-208ENST00000609021 CSAG1Q6PB30 78 aa3.25□□□□□ -1.89
HDDC2-208ENST00000609021 ANK3Q12955 4377 aaKnown RBP3.25□□□□□ -1.89
HDDC2-208ENST00000609021 OTOGLQ3ZCN5 2332 aa3.25□□□□□ -1.89
HDDC2-208ENST00000609021 LOC110117498A0A087WWA1 95 aa3.24□□□□□ -1.89
HDDC2-208ENST00000609021 IGKV1-17P01599 117 aa3.24□□□□□ -1.89
HDDC2-208ENST00000609021 Q8N9L7 120 aa3.24□□□□□ -1.89
HDDC2-208ENST00000609021 C11orf21Q9P2W6 132 aa3.24□□□□□ -1.89
HDDC2-208ENST00000609021 MIR22HGQ0VDD5 57 aa3.24□□□□□ -1.89
HDDC2-208ENST00000609021 Q8NAQ8 132 aa3.24□□□□□ -1.89
HDDC2-208ENST00000609021 PRRC2CQ9Y520 2896 aaKnown RBP3.24□□□□□ -1.89
HDDC2-208ENST00000609021 A0A1B0GW54 56 aa3.24□□□□□ -1.89
HDDC2-208ENST00000609021 ATP6V0E1O15342 81 aa3.24□□□□□ -1.89
HDDC2-208ENST00000609021 CRYBG3Q68DQ2 2970 aa3.24□□□□□ -1.89
HDDC2-208ENST00000609021 IGHV3-20A0A0C4DH32 117 aa3.23□□□□□ -1.89
HDDC2-208ENST00000609021 IGLV1-51P01701 117 aa3.23□□□□□ -1.89
HDDC2-208ENST00000609021 LINC01006Q8NI28 216 aa3.23□□□□□ -1.89
HDDC2-208ENST00000609021 ROMO1P60602 79 aa3.23□□□□□ -1.89
HDDC2-208ENST00000609021 C11orf71Q6IPW1 123 aa3.23□□□□□ -1.89
HDDC2-208ENST00000609021 XAGE1AQ9HD64 81 aa3.23□□□□□ -1.89
HDDC2-208ENST00000609021 PRAC2D3DTV9 90 aa3.22□□□□□ -1.89
HDDC2-208ENST00000609021 K7ERS5 55 aa3.22□□□□□ -1.89
HDDC2-208ENST00000609021 IGHV3-53P01767 116 aa3.22□□□□□ -1.89
HDDC2-208ENST00000609021 SMIM29Q86T20 159 aa3.22□□□□□ -1.89
HDDC2-208ENST00000609021 Q9BRP9 147 aa3.22□□□□□ -1.89
HDDC2-208ENST00000609021 DPM3Q9P2X0 92 aa3.22□□□□□ -1.89
HDDC2-208ENST00000609021 RAI1Q7Z5J4 1906 aaPredicted RBP3.22□□□□□ -1.89
HDDC2-208ENST00000609021 DNAJC9-AS1A6NH13 148 aa3.22□□□□□ -1.89
HDDC2-208ENST00000609021 CMC4P56277 68 aaPredicted RBP3.22□□□□□ -1.89
HDDC2-208ENST00000609021 MUC7Q8TAX7 377 aa3.22□□□□□ -1.89
HDDC2-208ENST00000609021 LENEPQ9Y5L5 61 aa3.22□□□□□ -1.89
HDDC2-208ENST00000609021 SPG11Q96JI7 2443 aa3.21□□□□□ -1.89
HDDC2-208ENST00000609021 COX7A1P24310 79 aa3.21□□□□□ -1.9
HDDC2-208ENST00000609021 C1orf229Q6ZS94 237 aaPredicted RBP3.21□□□□□ -1.9
HDDC2-208ENST00000609021 A0A087X002 238 aa3.21□□□□□ -1.9
HDDC2-208ENST00000609021 PATE3B3GLJ2 98 aa3.21□□□□□ -1.9
HDDC2-208ENST00000609021 C9orf47Q6ZRZ4 202 aa3.21□□□□□ -1.9
HDDC2-208ENST00000609021 NOTCH2NLQ7Z3S9 236 aa3.21□□□□□ -1.9
HDDC2-208ENST00000609021 IGF2RP11717 2491 aa3.21□□□□□ -1.9
HDDC2-208ENST00000609021 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.21□□□□□ -1.9
HDDC2-208ENST00000609021 CELSR2Q9HCU4 2923 aa3.21□□□□□ -1.9
HDDC2-208ENST00000609021 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.2□□□□□ -1.9
HDDC2-208ENST00000609021 CCL3P10147 92 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms