RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 IGLV1-51P01701 117 aa15.5■□□□□ 0.07
SHANK2-220ENST00000608988 LYPD5Q6UWN5 251 aa15.5■□□□□ 0.07
SHANK2-220ENST00000608988 LINC00612Q8N6U2 182 aa15.5■□□□□ 0.07
SHANK2-220ENST00000608988 NANOS2P60321 138 aaKnown RBP15.48■□□□□ 0.07
SHANK2-220ENST00000608988 A0A087WVE0 104 aa15.46■□□□□ 0.07
SHANK2-220ENST00000608988 XCL1P47992 114 aa15.46■□□□□ 0.07
SHANK2-220ENST00000608988 LOC107984640A0A0U1RRK4 108 aa15.46■□□□□ 0.06
SHANK2-220ENST00000608988 MUC7Q8TAX7 377 aa15.46■□□□□ 0.06
SHANK2-220ENST00000608988 IGHV4-28A0A0C4DH34 117 aa15.45■□□□□ 0.06
SHANK2-220ENST00000608988 NDUFC2-KCTD14E9PQ53 114 aa15.45■□□□□ 0.06
SHANK2-220ENST00000608988 C11orf68Q9H3H3 251 aaKnown RBP15.44■□□□□ 0.06
SHANK2-220ENST00000608988 LRRK2Q5S007 2527 aa15.44■□□□□ 0.06
SHANK2-220ENST00000608988 BCE1O60756 84 aa15.44■□□□□ 0.06
SHANK2-220ENST00000608988 FAM19A5Q7Z5A7 132 aaPredicted RBP15.44■□□□□ 0.06
SHANK2-220ENST00000608988 CRYBG3Q68DQ2 2970 aa15.43■□□□□ 0.06
SHANK2-220ENST00000608988 GYPEP15421 78 aa15.43■□□□□ 0.06
SHANK2-220ENST00000608988 WFDC10AQ9H1F0 79 aa15.43■□□□□ 0.06
SHANK2-220ENST00000608988 C16orf95Q9H693 158 aa15.43■□□□□ 0.06
SHANK2-220ENST00000608988 ANKRD17O75179 2603 aaKnown RBP15.42■□□□□ 0.06
SHANK2-220ENST00000608988 DPH3Q96FX2 82 aa15.42■□□□□ 0.06
SHANK2-220ENST00000608988 UBL5Q9BZL1 73 aa15.42■□□□□ 0.06
SHANK2-220ENST00000608988 H3BQ85 93 aa15.42■□□□□ 0.06
SHANK2-220ENST00000608988 CD164L2Q6UWJ8 174 aa15.42■□□□□ 0.06
SHANK2-220ENST00000608988 CELSR2Q9HCU4 2923 aa15.41■□□□□ 0.06
SHANK2-220ENST00000608988 KIAA0087Q14695 138 aa15.41■□□□□ 0.06
SHANK2-220ENST00000608988 C5orf47Q569G3 176 aa15.41■□□□□ 0.06
SHANK2-220ENST00000608988 CYSTM1Q9H1C7 97 aa15.4■□□□□ 0.06
SHANK2-220ENST00000608988 SMIM9A6NGZ8 99 aa15.38■□□□□ 0.05
SHANK2-220ENST00000608988 PLA2G2AP14555 144 aa15.38■□□□□ 0.05
SHANK2-220ENST00000608988 PRO0255Q9UI72 69 aa15.38■□□□□ 0.05
SHANK2-220ENST00000608988 LOC110117498A0A087WWA1 95 aa15.37■□□□□ 0.05
SHANK2-220ENST00000608988 DEFB130BP0DP73 79 aa15.37■□□□□ 0.05
SHANK2-220ENST00000608988 DEFB130AP0DP74 79 aa15.37■□□□□ 0.05
SHANK2-220ENST00000608988 KRTAP10-9P60411 292 aa15.37■□□□□ 0.05
SHANK2-220ENST00000608988 LINC00575Q6W349 94 aa15.37■□□□□ 0.05
SHANK2-220ENST00000608988 KRTAP1-3Q8IUG1 177 aa15.37■□□□□ 0.05
SHANK2-220ENST00000608988 UTP20O75691 2785 aaKnown RBP15.36■□□□□ 0.05
SHANK2-220ENST00000608988 GHRHP01286 108 aa15.36■□□□□ 0.05
SHANK2-220ENST00000608988 ZNF561-AS1K7EIQ3 104 aa15.35■□□□□ 0.05
SHANK2-220ENST00000608988 ESM1Q9NQ30 184 aa15.35■□□□□ 0.05
SHANK2-220ENST00000608988 MXRA5Q9NR99 2828 aa15.35■□□□□ 0.05
SHANK2-220ENST00000608988 USP9YO00507 2555 aaPredicted RBP15.34■□□□□ 0.05
SHANK2-220ENST00000608988 LINC01006Q8NI28 216 aa15.34■□□□□ 0.05
SHANK2-220ENST00000608988 PRR3P79522 188 aaKnown RBP15.33■□□□□ 0.05
SHANK2-220ENST00000608988 TENM4Q6N022 2769 aa15.33■□□□□ 0.04
SHANK2-220ENST00000608988 C6orf99Q4VX62 202 aa15.33■□□□□ 0.04
SHANK2-220ENST00000608988 C6orf223Q8N319 242 aa15.33■□□□□ 0.04
SHANK2-220ENST00000608988 PDE6GP18545 87 aa15.32■□□□□ 0.04
SHANK2-220ENST00000608988 RBM3P98179 157 aaKnown RBP15.32■□□□□ 0.04
SHANK2-220ENST00000608988 Q6ZQT0 140 aa15.32■□□□□ 0.04
SHANK2-220ENST00000608988 CHCHD10Q8WYQ3 142 aaPredicted RBP15.32■□□□□ 0.04
SHANK2-220ENST00000608988 RNASE1P07998 156 aaKnown RBP15.31■□□□□ 0.04
SHANK2-220ENST00000608988 ENHOQ6UWT2 76 aa15.31■□□□□ 0.04
SHANK2-220ENST00000608988 HILS1P60008 231 aa15.31■□□□□ 0.04
SHANK2-220ENST00000608988 HELZ2Q9BYK8 2649 aaKnown RBP15.3■□□□□ 0.04
SHANK2-220ENST00000608988 MAP1AP78559 2803 aaPredicted RBP15.3■□□□□ 0.04
SHANK2-220ENST00000608988 CLPSL2Q6UWE3 100 aa15.29■□□□□ 0.04
SHANK2-220ENST00000608988 LINC00269Q8N2A0 174 aa15.29■□□□□ 0.04
SHANK2-220ENST00000608988 LYRM9A8MSI8 78 aa15.29■□□□□ 0.04
SHANK2-220ENST00000608988 FAM19A1Q7Z5A9 133 aa15.29■□□□□ 0.04
SHANK2-220ENST00000608988 TRAV23DV6A0A075B6W5 121 aa15.28■□□□□ 0.04
SHANK2-220ENST00000608988 ZANQ9Y493 2812 aa15.27■□□□□ 0.04
SHANK2-220ENST00000608988 REG3AQ06141 175 aa15.27■□□□□ 0.03
SHANK2-220ENST00000608988 FBN2P35556 2912 aa15.26■□□□□ 0.03
SHANK2-220ENST00000608988 X6R8D5 127 aa15.26■□□□□ 0.03
SHANK2-220ENST00000608988 TRAV7A0A075B6U4 112 aa15.25■□□□□ 0.03
SHANK2-220ENST00000608988 C9orf66Q5T8R8 295 aa15.25■□□□□ 0.03
SHANK2-220ENST00000608988 MYO9AB2RTY4 2548 aa15.25■□□□□ 0.03
SHANK2-220ENST00000608988 A0A0J9YWU9 116 aa15.24■□□□□ 0.03
SHANK2-220ENST00000608988 IGLV6-57P01721 117 aa15.24■□□□□ 0.03
SHANK2-220ENST00000608988 IGHV4-30-4P0DP06 118 aa15.24■□□□□ 0.03
SHANK2-220ENST00000608988 DSCR8Q96T75 97 aa15.24■□□□□ 0.03
SHANK2-220ENST00000608988 WFDC9Q8NEX5 89 aa15.23■□□□□ 0.03
SHANK2-220ENST00000608988 ANGP03950 147 aaKnown RBP15.23■□□□□ 0.03
SHANK2-220ENST00000608988 CXCL6P80162 114 aa15.22■□□□□ 0.03
SHANK2-220ENST00000608988 LINC00482Q8N8I6 264 aa15.22■□□□□ 0.03
SHANK2-220ENST00000608988 LAMTOR3Q9UHA4 124 aa15.22■□□□□ 0.03
SHANK2-220ENST00000608988 NOTCH3Q9UM47 2321 aa15.21■□□□□ 0.03
SHANK2-220ENST00000608988 C2CD3Q4AC94 2353 aa15.21■□□□□ 0.03
SHANK2-220ENST00000608988 C9orf116Q5BN46 136 aaPredicted RBP15.2■□□□□ 0.02
SHANK2-220ENST00000608988 Q8NDZ9 215 aa15.2■□□□□ 0.02
SHANK2-220ENST00000608988 PTPN13Q12923 2485 aa15.2■□□□□ 0.02
SHANK2-220ENST00000608988 LINC01547P58512 204 aaPredicted RBP15.19■□□□□ 0.02
SHANK2-220ENST00000608988 SPAG11BQ08648 103 aa15.19■□□□□ 0.02
SHANK2-220ENST00000608988 CENPEQ02224 2701 aa15.19■□□□□ 0.02
SHANK2-220ENST00000608988 GVQW2A0A096LPI5 108 aaPredicted RBP15.18■□□□□ 0.02
SHANK2-220ENST00000608988 OXTP01178 125 aa15.18■□□□□ 0.02
SHANK2-220ENST00000608988 WIPF1O43516 503 aa15.18■□□□□ 0.02
SHANK2-220ENST00000608988 A0A096LPF7 62 aa15.17■□□□□ 0.02
SHANK2-220ENST00000608988 Q6ZVQ6 151 aa15.17■□□□□ 0.02
SHANK2-220ENST00000608988 C20orf197Q8N268 126 aa15.17■□□□□ 0.02
SHANK2-220ENST00000608988 FAM236DA0A1B0GTK5 79 aa15.16■□□□□ 0.02
SHANK2-220ENST00000608988 FAM236CP0DP71 79 aa15.16■□□□□ 0.02
SHANK2-220ENST00000608988 WNK1Q9H4A3 2382 aa15.15■□□□□ 0.02
SHANK2-220ENST00000608988 TEX15Q9BXT5 2789 aa15.15■□□□□ 0.02
SHANK2-220ENST00000608988 IGLV10-54A0A075B6I4 117 aa15.15■□□□□ 0.02
SHANK2-220ENST00000608988 NBPF19A0A087WUL8 3843 aa15.15■□□□□ 0.02
SHANK2-220ENST00000608988 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-220ENST00000608988 WFDC11Q8NEX6 87 aa15.15■□□□□ 0.02
SHANK2-220ENST00000608988 TRBV7-6A0A0J9YX20 115 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms