RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	IGIP	A6NJ69	53 aa		12.33	□□□□□ -0.44
NECAB3-222	ENST00000607805	CKS1B	P61024	79 aa		12.33	□□□□□ -0.44
NECAB3-222	ENST00000607805	C6orf226	Q5I0X4	101 aa		12.33	□□□□□ -0.44
NECAB3-222	ENST00000607805		Q8N8P6	123 aa		12.33	□□□□□ -0.44
NECAB3-222	ENST00000607805	LOC389332	A0A1B0GUA5	103 aa		12.32	□□□□□ -0.44
NECAB3-222	ENST00000607805	MRPL55	Q7Z7F7	128 aa	Known RBP	12.32	□□□□□ -0.44
NECAB3-222	ENST00000607805	VCX2	Q9H322	139 aa		12.32	□□□□□ -0.44
NECAB3-222	ENST00000607805	BCE1	O60756	84 aa		12.31	□□□□□ -0.44
NECAB3-222	ENST00000607805	RPL28	P46779	137 aa	Known RBP	12.31	□□□□□ -0.44
NECAB3-222	ENST00000607805	ALKBH7	Q9BT30	221 aa	Predicted RBP	12.31	□□□□□ -0.44
NECAB3-222	ENST00000607805	MAP1LC3A	Q9H492	121 aa		12.31	□□□□□ -0.44
NECAB3-222	ENST00000607805		F8VRH5	84 aa		12.3	□□□□□ -0.44
NECAB3-222	ENST00000607805	CRYGA	P11844	174 aa		12.3	□□□□□ -0.44
NECAB3-222	ENST00000607805	CDKN2A-AS1	Q9UH64	79 aa		12.3	□□□□□ -0.44
NECAB3-222	ENST00000607805	TYMSOS	Q8TAI1	123 aa		12.29	□□□□□ -0.44
NECAB3-222	ENST00000607805	KRTAP13-2	Q52LG2	175 aa		12.28	□□□□□ -0.44
NECAB3-222	ENST00000607805	ORMDL2	Q53FV1	153 aa		12.28	□□□□□ -0.44
NECAB3-222	ENST00000607805	LINC00167	Q96N53	147 aa		12.28	□□□□□ -0.44
NECAB3-222	ENST00000607805		K7EMI3	77 aa		12.27	□□□□□ -0.45
NECAB3-222	ENST00000607805	HERVK_113	P63121	156 aa		12.27	□□□□□ -0.45
NECAB3-222	ENST00000607805	KRTAP13-1	Q8IUC0	172 aa		12.27	□□□□□ -0.45
NECAB3-222	ENST00000607805	SEC11A	P67812	179 aa		12.25	□□□□□ -0.45
NECAB3-222	ENST00000607805	ANAPC11	Q9NYG5	84 aa		12.25	□□□□□ -0.45
NECAB3-222	ENST00000607805	CXCL5	P42830	114 aa		12.24	□□□□□ -0.45
NECAB3-222	ENST00000607805	RPL37AP8	A6NKH3	93 aa		12.23	□□□□□ -0.45
NECAB3-222	ENST00000607805	PNRC1	Q12796	327 aa	Predicted RBP	12.23	□□□□□ -0.45
NECAB3-222	ENST00000607805	TIMM17A	Q99595	171 aa		12.23	□□□□□ -0.45
NECAB3-222	ENST00000607805	IGLV5-37	A0A075B6J1	123 aa		12.22	□□□□□ -0.45
NECAB3-222	ENST00000607805	CLLU1	Q5K131	121 aa		12.22	□□□□□ -0.45
NECAB3-222	ENST00000607805	SMIM1	B2RUZ4	78 aa		12.21	□□□□□ -0.45
NECAB3-222	ENST00000607805	MT-ND4L	P03901	98 aa		12.21	□□□□□ -0.45
NECAB3-222	ENST00000607805	PAPPA-AS1	Q5QFB9	102 aa		12.21	□□□□□ -0.45
NECAB3-222	ENST00000607805	ANAPC16	Q96DE5	110 aa		12.21	□□□□□ -0.45
NECAB3-222	ENST00000607805	GEMIN7	Q9H840	131 aa	Known RBP	12.21	□□□□□ -0.45
NECAB3-222	ENST00000607805	NXT2	Q9NPJ8	142 aa	Known RBP	12.21	□□□□□ -0.45
NECAB3-222	ENST00000607805	FAM229B	Q4G0N7	80 aa		12.2	□□□□□ -0.46
NECAB3-222	ENST00000607805	TOMM6	Q96B49	74 aa		12.2	□□□□□ -0.46
NECAB3-222	ENST00000607805	RETNLB	Q9BQ08	111 aa		12.19	□□□□□ -0.46
NECAB3-222	ENST00000607805	IGLV5-45	A0A087WSX0	123 aa		12.18	□□□□□ -0.46
NECAB3-222	ENST00000607805	PDZD11	Q5EBL8	140 aa		12.18	□□□□□ -0.46
NECAB3-222	ENST00000607805	GAGE10	A6NGK3	116 aa		12.17	□□□□□ -0.46
NECAB3-222	ENST00000607805	TPRXL	Q17RH7	258 aa		12.17	□□□□□ -0.46
NECAB3-222	ENST00000607805	COX7B2	Q8TF08	81 aa		12.17	□□□□□ -0.46
NECAB3-222	ENST00000607805	IFITM2	Q01629	132 aa		12.16	□□□□□ -0.46
NECAB3-222	ENST00000607805	LINC00304	Q8N9R0	145 aa		12.16	□□□□□ -0.46
NECAB3-222	ENST00000607805	TINCR	A0A1B0GVN0	87 aa		12.15	□□□□□ -0.46
NECAB3-222	ENST00000607805	G0S2	P27469	103 aa		12.15	□□□□□ -0.46
NECAB3-222	ENST00000607805	ERAS	Q7Z444	233 aa		12.15	□□□□□ -0.46
NECAB3-222	ENST00000607805	CTAG1A	P78358	180 aa		12.14	□□□□□ -0.47
NECAB3-222	ENST00000607805	UQCC3	Q6UW78	93 aa		12.14	□□□□□ -0.47
NECAB3-222	ENST00000607805	UBE2A	P49459	152 aa		12.13	□□□□□ -0.47
NECAB3-222	ENST00000607805	KRTAP9-6	A0A140TA67	174 aa		12.12	□□□□□ -0.47
NECAB3-222	ENST00000607805	ADCYAP1	P18509	176 aa		12.12	□□□□□ -0.47
NECAB3-222	ENST00000607805	TMEM218	A2RU14	115 aa		12.11	□□□□□ -0.47
NECAB3-222	ENST00000607805	SCO1	O75880	301 aa		12.11	□□□□□ -0.47
NECAB3-222	ENST00000607805	RAB5B	P61020	215 aa		12.11	□□□□□ -0.47
NECAB3-222	ENST00000607805	NKAPP1	Q8N9T2	125 aa		12.11	□□□□□ -0.47
NECAB3-222	ENST00000607805	SCGB3A1	Q96QR1	104 aa		12.1	□□□□□ -0.47
NECAB3-222	ENST00000607805	CDIP1	Q9H305	208 aa		12.1	□□□□□ -0.47
NECAB3-222	ENST00000607805	IGLV7-46	A0A075B6I9	117 aa		12.09	□□□□□ -0.47
NECAB3-222	ENST00000607805	IGKV2-28	A0A075B6P5	120 aa		12.09	□□□□□ -0.47
NECAB3-222	ENST00000607805	IGKV2D-28	P01615	120 aa		12.09	□□□□□ -0.47
NECAB3-222	ENST00000607805	LINC01546	A6NGU7	62 aa		12.08	□□□□□ -0.48
NECAB3-222	ENST00000607805	SPINK8	P0C7L1	97 aa		12.08	□□□□□ -0.48
NECAB3-222	ENST00000607805	CST9L	Q9H4G1	147 aa		12.08	□□□□□ -0.48
NECAB3-222	ENST00000607805	KIAA1644	Q3SXP7	199 aa		12.07	□□□□□ -0.48
NECAB3-222	ENST00000607805	IGKV2D-26	A0A0A0MRZ7	120 aa		12.06	□□□□□ -0.48
NECAB3-222	ENST00000607805	PRLH	P81277	87 aa		12.06	□□□□□ -0.48
NECAB3-222	ENST00000607805	VPREB1	P12018	145 aa		12.05	□□□□□ -0.48
NECAB3-222	ENST00000607805	COMMD7	Q86VX2	200 aa		12.05	□□□□□ -0.48
NECAB3-222	ENST00000607805	SEC11C	Q9BY50	192 aa		12.05	□□□□□ -0.48
NECAB3-222	ENST00000607805	TMEM126A	Q9H061	195 aa		12.05	□□□□□ -0.48
NECAB3-222	ENST00000607805	LINC01549	A6NIU2	74 aa		12.04	□□□□□ -0.48
NECAB3-222	ENST00000607805	IGLV5-39	A0A0G2JS06	123 aa		12.03	□□□□□ -0.48
NECAB3-222	ENST00000607805	TMEM238	C9JI98	176 aa		12.03	□□□□□ -0.48
NECAB3-222	ENST00000607805	PLEKHB2	Q96CS7	222 aa		12.03	□□□□□ -0.48
NECAB3-222	ENST00000607805	MRPL18	Q9H0U6	180 aa	Known RBP	12.03	□□□□□ -0.48
NECAB3-222	ENST00000607805		M0R378	163 aa		12.02	□□□□□ -0.49
NECAB3-222	ENST00000607805	PMVK	Q15126	192 aa		12.02	□□□□□ -0.49
NECAB3-222	ENST00000607805	FAM19A1	Q7Z5A9	133 aa		12.02	□□□□□ -0.49
NECAB3-222	ENST00000607805	C3orf22	Q8N5N4	141 aa		12.02	□□□□□ -0.49
NECAB3-222	ENST00000607805	ATP5L	O75964	103 aa		12.01	□□□□□ -0.49
NECAB3-222	ENST00000607805		Q8NDZ9	215 aa		12.01	□□□□□ -0.49
NECAB3-222	ENST00000607805	PPDPF	Q9H3Y8	114 aa		12.01	□□□□□ -0.49
NECAB3-222	ENST00000607805	SND1-IT1	Q9HBX3	110 aa		12.01	□□□□□ -0.49
NECAB3-222	ENST00000607805	TRAV9-1	A0A075B6T8	112 aa		12	□□□□□ -0.49
NECAB3-222	ENST00000607805	S100P	P25815	95 aa		12	□□□□□ -0.49
NECAB3-222	ENST00000607805	PFN2	P35080	140 aa		12	□□□□□ -0.49
NECAB3-222	ENST00000607805		H3BRM9	83 aa		11.98	□□□□□ -0.49
NECAB3-222	ENST00000607805	IGLC3	P0DOY3	106 aa		11.98	□□□□□ -0.49
NECAB3-222	ENST00000607805	COX17	Q14061	63 aa		11.96	□□□□□ -0.49
NECAB3-222	ENST00000607805	GNB1L	Q9BYB4	327 aa		11.96	□□□□□ -0.49
NECAB3-222	ENST00000607805	ERG28	Q9UKR5	140 aa		11.96	□□□□□ -0.49
NECAB3-222	ENST00000607805	RPL24	P83731	157 aa	Known RBP	11.95	□□□□□ -0.5
NECAB3-222	ENST00000607805	C10orf91	Q5T1B1	145 aa		11.95	□□□□□ -0.5
NECAB3-222	ENST00000607805	CBLN2	Q8IUK8	224 aa		11.95	□□□□□ -0.5
NECAB3-222	ENST00000607805	ZNF22	P17026	224 aa	Predicted RBP	11.94	□□□□□ -0.5
NECAB3-222	ENST00000607805	SPAG11A	Q6PDA7	123 aa		11.94	□□□□□ -0.5
NECAB3-222	ENST00000607805	RPS10P5	Q9NQ39	176 aa		11.94	□□□□□ -0.5
NECAB3-222	ENST00000607805	FP248	Q71RG6	208 aa	Predicted RBP	11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms