RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 SVBPQ8N300 66 aa8.97□□□□□ -0.97
PKNOX1-210ENST00000607049 APOC3P02656 99 aa8.96□□□□□ -0.98
PKNOX1-210ENST00000607049 C2orf82Q6UX34 121 aa8.96□□□□□ -0.98
PKNOX1-210ENST00000607049 LINC00469Q8N7U9 141 aa8.96□□□□□ -0.98
PKNOX1-210ENST00000607049 TRAPPC1Q9Y5R8 145 aa8.96□□□□□ -0.98
PKNOX1-210ENST00000607049 FAT3Q8TDW7 4589 aa8.95□□□□□ -0.98
PKNOX1-210ENST00000607049 LINC01546A6NGU7 62 aa8.95□□□□□ -0.98
PKNOX1-210ENST00000607049 CXCL5P42830 114 aa8.95□□□□□ -0.98
PKNOX1-210ENST00000607049 CDKN2A-AS1Q9UH64 79 aa8.95□□□□□ -0.98
PKNOX1-210ENST00000607049 TINCRA0A1B0GVN0 87 aa8.94□□□□□ -0.98
PKNOX1-210ENST00000607049 PKHD1L1Q86WI1 4243 aa8.94□□□□□ -0.98
PKNOX1-210ENST00000607049 F8VRH5 84 aa8.93□□□□□ -0.98
PKNOX1-210ENST00000607049 RAB5BP61020 215 aa8.93□□□□□ -0.98
PKNOX1-210ENST00000607049 PMVKQ15126 192 aa8.93□□□□□ -0.98
PKNOX1-210ENST00000607049 C4orf48Q5BLP8 95 aa8.93□□□□□ -0.98
PKNOX1-210ENST00000607049 PHF5AQ7RTV0 110 aaKnown RBP8.93□□□□□ -0.98
PKNOX1-210ENST00000607049 FAM19A5Q7Z5A7 132 aaPredicted RBP8.93□□□□□ -0.98
PKNOX1-210ENST00000607049 PSORS1C2Q9UIG4 136 aa8.93□□□□□ -0.98
PKNOX1-210ENST00000607049 H3BRM9 83 aa8.92□□□□□ -0.98
PKNOX1-210ENST00000607049 UBE2BP63146 152 aa8.92□□□□□ -0.98
PKNOX1-210ENST00000607049 PDZD11Q5EBL8 140 aa8.92□□□□□ -0.98
PKNOX1-210ENST00000607049 C1orf137Q5JT78 98 aa8.92□□□□□ -0.98
PKNOX1-210ENST00000607049 LINC01600Q96MT4 127 aa8.92□□□□□ -0.98
PKNOX1-210ENST00000607049 CST9LQ9H4G1 147 aa8.92□□□□□ -0.98
PKNOX1-210ENST00000607049 PLA2G2DQ9UNK4 145 aa8.92□□□□□ -0.98
PKNOX1-210ENST00000607049 FAM168BA1KXE4 195 aa8.9□□□□□ -0.98
PKNOX1-210ENST00000607049 M0QXV9 152 aa8.9□□□□□ -0.98
PKNOX1-210ENST00000607049 LINC00614P0C842 121 aa8.9□□□□□ -0.98
PKNOX1-210ENST00000607049 NDUFA6P56556 154 aa8.9□□□□□ -0.98
PKNOX1-210ENST00000607049 SRSF9Q13242 221 aaKnown RBP eCLIP8.9□□□□□ -0.98
PKNOX1-210ENST00000607049 MT1HL1P0DM35 61 aa8.89□□□□□ -0.99
PKNOX1-210ENST00000607049 COX7B2Q8TF08 81 aa8.89□□□□□ -0.99
PKNOX1-210ENST00000607049 IGLV5-45A0A087WSX0 123 aa8.88□□□□□ -0.99
PKNOX1-210ENST00000607049 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
PKNOX1-210ENST00000607049 HBDP02042 147 aa8.88□□□□□ -0.99
PKNOX1-210ENST00000607049 LBHQ53QV2 105 aaPredicted RBP8.88□□□□□ -0.99
PKNOX1-210ENST00000607049 C18orf32Q8TCD1 76 aa8.88□□□□□ -0.99
PKNOX1-210ENST00000607049 DIRC1Q969H9 104 aa8.88□□□□□ -0.99
PKNOX1-210ENST00000607049 ATP5LO75964 103 aa8.87□□□□□ -0.99
PKNOX1-210ENST00000607049 IGLV7-43P04211 117 aa8.86□□□□□ -0.99
PKNOX1-210ENST00000607049 C9orf129Q5T035 196 aaKnown RBP8.86□□□□□ -0.99
PKNOX1-210ENST00000607049 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
PKNOX1-210ENST00000607049 XAGE1AQ9HD64 81 aa8.85□□□□□ -0.99
PKNOX1-210ENST00000607049 IGLC3P0DOY3 106 aa8.83□□□□□ -1
PKNOX1-210ENST00000607049 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
PKNOX1-210ENST00000607049 ODF1Q14990 250 aa8.82□□□□□ -1
PKNOX1-210ENST00000607049 SFTA2Q6UW10 78 aa8.82□□□□□ -1
PKNOX1-210ENST00000607049 BAGE3Q86Y29 109 aa8.82□□□□□ -1
PKNOX1-210ENST00000607049 CHCHD1Q96BP2 118 aaKnown RBP8.82□□□□□ -1
PKNOX1-210ENST00000607049 C22orf24Q9Y442 160 aa8.82□□□□□ -1
PKNOX1-210ENST00000607049 NUPR1O60356 82 aa8.81□□□□□ -1
PKNOX1-210ENST00000607049 PMCHL1Q16048 86 aa8.81□□□□□ -1
PKNOX1-210ENST00000607049 TP73-AS1Q9UF72 201 aa8.81□□□□□ -1
PKNOX1-210ENST00000607049 A0A096LNJ9 63 aa8.8□□□□□ -1
PKNOX1-210ENST00000607049 H0Y9J4 135 aa8.8□□□□□ -1
PKNOX1-210ENST00000607049 TMEM170BQ5T4T1 132 aa8.8□□□□□ -1
PKNOX1-210ENST00000607049 MRPL55Q7Z7F7 128 aaKnown RBP8.8□□□□□ -1
PKNOX1-210ENST00000607049 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
PKNOX1-210ENST00000607049 URB1-AS1Q96HZ7 61 aa8.8□□□□□ -1
PKNOX1-210ENST00000607049 KRTAP10-8P60410 259 aa8.79□□□□□ -1
PKNOX1-210ENST00000607049 NKAPP1Q8N9T2 125 aa8.79□□□□□ -1
PKNOX1-210ENST00000607049 IGLV5-39A0A0G2JS06 123 aa8.78□□□□□ -1
PKNOX1-210ENST00000607049 ZNF22P17026 224 aaPredicted RBP8.78□□□□□ -1
PKNOX1-210ENST00000607049 CHTOPQ9Y3Y2 248 aaKnown RBP8.78□□□□□ -1
PKNOX1-210ENST00000607049 LCE2BO14633 110 aa8.77□□□□□ -1.01
PKNOX1-210ENST00000607049 HSBP1O75506 76 aa8.77□□□□□ -1.01
PKNOX1-210ENST00000607049 KRTAP11-1Q8IUC1 163 aa8.77□□□□□ -1.01
PKNOX1-210ENST00000607049 PFN2P35080 140 aa8.76□□□□□ -1.01
PKNOX1-210ENST00000607049 COX17Q14061 63 aa8.76□□□□□ -1.01
PKNOX1-210ENST00000607049 IFI27L1Q96BM0 104 aa8.76□□□□□ -1.01
PKNOX1-210ENST00000607049 YPEL4Q96NS1 127 aa8.76□□□□□ -1.01
PKNOX1-210ENST00000607049 TRAV12-1A0A0B4J245 112 aa8.75□□□□□ -1.01
PKNOX1-210ENST00000607049 C11orf86A6NJI1 115 aa8.75□□□□□ -1.01
PKNOX1-210ENST00000607049 ZNF861PO60384 105 aa8.75□□□□□ -1.01
PKNOX1-210ENST00000607049 RPL28P46779 137 aaKnown RBP8.75□□□□□ -1.01
PKNOX1-210ENST00000607049 CBLN2Q8IUK8 224 aa8.75□□□□□ -1.01
PKNOX1-210ENST00000607049 ERG28Q9UKR5 140 aa8.75□□□□□ -1.01
PKNOX1-210ENST00000607049 IGLV1-50A0A075B6I6 118 aa8.74□□□□□ -1.01
PKNOX1-210ENST00000607049 RPL24P83731 157 aaKnown RBP8.74□□□□□ -1.01
PKNOX1-210ENST00000607049 TNXBP22105 4242 aa8.73□□□□□ -1.01
PKNOX1-210ENST00000607049 BCE1O60756 84 aa8.73□□□□□ -1.01
PKNOX1-210ENST00000607049 RPL13AP40429 203 aaKnown RBP8.73□□□□□ -1.01
PKNOX1-210ENST00000607049 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
PKNOX1-210ENST00000607049 IGLV5-37A0A075B6J1 123 aa8.72□□□□□ -1.01
PKNOX1-210ENST00000607049 GAGE10A6NGK3 116 aa8.72□□□□□ -1.01
PKNOX1-210ENST00000607049 RPL37AP8A6NKH3 93 aa8.72□□□□□ -1.01
PKNOX1-210ENST00000607049 ATP6V1G1O75348 118 aa8.72□□□□□ -1.01
PKNOX1-210ENST00000607049 TRGC2P03986 189 aa8.71□□□□□ -1.02
PKNOX1-210ENST00000607049 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
PKNOX1-210ENST00000607049 PRR26Q8N8Z3 221 aa8.71□□□□□ -1.02
PKNOX1-210ENST00000607049 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.02
PKNOX1-210ENST00000607049 LINC00158P58513 81 aa8.7□□□□□ -1.02
PKNOX1-210ENST00000607049 SND1-IT1Q9HBX3 110 aa8.7□□□□□ -1.02
PKNOX1-210ENST00000607049 LINC00587B1AMM8 73 aa8.69□□□□□ -1.02
PKNOX1-210ENST00000607049 LEPROTL1O95214 131 aa8.69□□□□□ -1.02
PKNOX1-210ENST00000607049 UBE2AP49459 152 aa8.69□□□□□ -1.02
PKNOX1-210ENST00000607049 TMEM223A0PJW6 202 aa8.68□□□□□ -1.02
PKNOX1-210ENST00000607049 FAM19A2Q8N3H0 131 aa8.68□□□□□ -1.02
PKNOX1-210ENST00000607049 HSPB8Q9UJY1 196 aa8.68□□□□□ -1.02
PKNOX1-210ENST00000607049 H0Y8G0 127 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms