RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 C1orf167Q5SNV9 1468 aa2.49□□□□□ -2.01
TUBE1-209ENST00000604814 CEP170BQ9Y4F5 1589 aaPredicted RBP2.49□□□□□ -2.01
TUBE1-209ENST00000604814 COL4A1P02462 1669 aa2.49□□□□□ -2.01
TUBE1-209ENST00000604814 URB2Q14146 1524 aaKnown RBP2.49□□□□□ -2.01
TUBE1-209ENST00000604814 PRB2P02812 416 aaPredicted RBP2.49□□□□□ -2.01
TUBE1-209ENST00000604814 ABCA9Q8IUA7 1624 aa2.48□□□□□ -2.01
TUBE1-209ENST00000604814 RAPGEF6Q8TEU7 1601 aa2.48□□□□□ -2.01
TUBE1-209ENST00000604814 ANKRD36A6QL64 1941 aa2.48□□□□□ -2.01
TUBE1-209ENST00000604814 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.48□□□□□ -2.01
TUBE1-209ENST00000604814 MYO7AQ13402 2215 aa2.48□□□□□ -2.01
TUBE1-209ENST00000604814 PIK3C2BO00750 1634 aa2.47□□□□□ -2.01
TUBE1-209ENST00000604814 E9PCH4 1651 aa2.47□□□□□ -2.01
TUBE1-209ENST00000604814 CDC42BPGQ6DT37 1551 aa2.47□□□□□ -2.01
TUBE1-209ENST00000604814 CD163L1Q9NR16 1453 aa2.47□□□□□ -2.01
TUBE1-209ENST00000604814 FXYD6-FXYD2A0A087WZ82 144 aa2.47□□□□□ -2.01
TUBE1-209ENST00000604814 NCR3O14931 201 aa2.47□□□□□ -2.01
TUBE1-209ENST00000604814 KIF1AQ12756 1690 aa2.47□□□□□ -2.01
TUBE1-209ENST00000604814 PLXNC1O60486 1568 aa2.47□□□□□ -2.01
TUBE1-209ENST00000604814 IFI6P09912 130 aa2.46□□□□□ -2.02
TUBE1-209ENST00000604814 ATXN8Q156A1 80 aa2.46□□□□□ -2.02
TUBE1-209ENST00000604814 Q6ZRX8 168 aa2.46□□□□□ -2.02
TUBE1-209ENST00000604814 SMIM11BQ8TCY0 68 aa2.46□□□□□ -2.02
TUBE1-209ENST00000604814 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
TUBE1-209ENST00000604814 A0A1B0GUL6 1792 aa2.46□□□□□ -2.02
TUBE1-209ENST00000604814 LCE3AQ5TA76 89 aa2.45□□□□□ -2.02
TUBE1-209ENST00000604814 C5P01031 1676 aa2.44□□□□□ -2.02
TUBE1-209ENST00000604814 A0A096LNT2 108 aa2.44□□□□□ -2.02
TUBE1-209ENST00000604814 ASCC3Q8N3C0 2202 aaKnown RBP2.44□□□□□ -2.02
TUBE1-209ENST00000604814 NHSL1Q5SYE7 1610 aa2.44□□□□□ -2.02
TUBE1-209ENST00000604814 GVQW2A0A096LPI5 108 aaPredicted RBP2.44□□□□□ -2.02
TUBE1-209ENST00000604814 NDUFB1O75438 58 aa2.44□□□□□ -2.02
TUBE1-209ENST00000604814 PCOTHQ58A44 107 aa2.44□□□□□ -2.02
TUBE1-209ENST00000604814 FAM103A1Q9BTL3 118 aaKnown RBP2.44□□□□□ -2.02
TUBE1-209ENST00000604814 ALKQ9UM73 1620 aa2.43□□□□□ -2.02
TUBE1-209ENST00000604814 F5P12259 2224 aa2.43□□□□□ -2.02
TUBE1-209ENST00000604814 BAHCC1Q9P281 2608 aa2.43□□□□□ -2.02
TUBE1-209ENST00000604814 TRAV21A0A0B4J279 112 aa2.43□□□□□ -2.02
TUBE1-209ENST00000604814 LY6G6CO95867 125 aa2.43□□□□□ -2.02
TUBE1-209ENST00000604814 HAMPP81172 84 aa2.43□□□□□ -2.02
TUBE1-209ENST00000604814 LINC00575Q6W349 94 aa2.43□□□□□ -2.02
TUBE1-209ENST00000604814 CLASP1Q7Z460 1538 aa2.43□□□□□ -2.02
TUBE1-209ENST00000604814 VWDEQ8N2E2 1590 aa2.42□□□□□ -2.02
TUBE1-209ENST00000604814 LRP6O75581 1613 aa2.42□□□□□ -2.02
TUBE1-209ENST00000604814 PKD1L3Q7Z443 1732 aa2.42□□□□□ -2.02
TUBE1-209ENST00000604814 HMGA1P17096 107 aaKnown RBP2.42□□□□□ -2.02
TUBE1-209ENST00000604814 DIP2AQ14689 1571 aa2.42□□□□□ -2.02
TUBE1-209ENST00000604814 PREX1Q8TCU6 1659 aa2.42□□□□□ -2.02
TUBE1-209ENST00000604814 G3V318 75 aa2.41□□□□□ -2.02
TUBE1-209ENST00000604814 WFDC9Q8NEX5 89 aa2.41□□□□□ -2.02
TUBE1-209ENST00000604814 XRN1Q8IZH2 1706 aaKnown RBP2.41□□□□□ -2.02
TUBE1-209ENST00000604814 SPINK13Q1W4C9 94 aa2.41□□□□□ -2.02
TUBE1-209ENST00000604814 DEFB112Q30KQ8 113 aa2.41□□□□□ -2.02
TUBE1-209ENST00000604814 PLCH1Q4KWH8 1693 aa2.41□□□□□ -2.02
TUBE1-209ENST00000604814 LRRC7Q96NW7 1537 aa2.4□□□□□ -2.02
TUBE1-209ENST00000604814 SAMD9Q5K651 1589 aa2.4□□□□□ -2.02
TUBE1-209ENST00000604814 ABCA6Q8N139 1617 aa2.4□□□□□ -2.03
TUBE1-209ENST00000604814 LRRC37A2A6NM11 1700 aa2.4□□□□□ -2.03
TUBE1-209ENST00000604814 TRBV6-1A0A0K0K1D8 114 aa2.4□□□□□ -2.03
TUBE1-209ENST00000604814 A0A1B0GU69 56 aa2.4□□□□□ -2.03
TUBE1-209ENST00000604814 NREPQ16612 68 aa2.39□□□□□ -2.03
TUBE1-209ENST00000604814 GAFA1Q96PS6 74 aa2.39□□□□□ -2.03
TUBE1-209ENST00000604814 UBR3Q6ZT12 1888 aa2.39□□□□□ -2.03
TUBE1-209ENST00000604814 RALGAPBQ86X10 1494 aa2.38□□□□□ -2.03
TUBE1-209ENST00000604814 SYCP2Q9BX26 1530 aa2.38□□□□□ -2.03
TUBE1-209ENST00000604814 PAPPAQ13219 1627 aa2.38□□□□□ -2.03
TUBE1-209ENST00000604814 ZNF831Q5JPB2 1677 aa2.38□□□□□ -2.03
TUBE1-209ENST00000604814 CROCC2H7BZ55 1655 aa2.38□□□□□ -2.03
TUBE1-209ENST00000604814 COL4A4P53420 1690 aaPredicted RBP2.38□□□□□ -2.03
TUBE1-209ENST00000604814 ITSN2Q9NZM3 1697 aa2.38□□□□□ -2.03
TUBE1-209ENST00000604814 KRTAP12-1P59990 96 aa2.38□□□□□ -2.03
TUBE1-209ENST00000604814 USP32Q8NFA0 1604 aa2.37□□□□□ -2.03
TUBE1-209ENST00000604814 RNF17Q9BXT8 1623 aaKnown RBP2.37□□□□□ -2.03
TUBE1-209ENST00000604814 SSC5DA1L4H1 1573 aa2.37□□□□□ -2.03
TUBE1-209ENST00000604814 SSBP3-AS1Q7Z2R9 100 aa2.36□□□□□ -2.03
TUBE1-209ENST00000604814 TIAM2Q8IVF5 1701 aa2.36□□□□□ -2.03
TUBE1-209ENST00000604814 LAMC1P11047 1609 aa2.36□□□□□ -2.03
TUBE1-209ENST00000604814 GLI2P10070 1586 aa2.36□□□□□ -2.03
TUBE1-209ENST00000604814 CACNA1BQ00975 2339 aa2.36□□□□□ -2.03
TUBE1-209ENST00000604814 ANKRD50Q9ULJ7 1429 aa2.36□□□□□ -2.03
TUBE1-209ENST00000604814 PAPPA2Q9BXP8 1791 aa2.36□□□□□ -2.03
TUBE1-209ENST00000604814 WIZO95785 1651 aa2.36□□□□□ -2.03
TUBE1-209ENST00000604814 PRB1P04280 392 aa2.36□□□□□ -2.03
TUBE1-209ENST00000604814 RPL37P61927 97 aaKnown RBP2.36□□□□□ -2.03
TUBE1-209ENST00000604814 CACNA1CQ13936 2221 aa2.35□□□□□ -2.03
TUBE1-209ENST00000604814 LINC01549A6NIU2 74 aa2.35□□□□□ -2.03
TUBE1-209ENST00000604814 PIN1P1O15428 100 aa2.35□□□□□ -2.03
TUBE1-209ENST00000604814 NHSQ6T4R5 1651 aa2.35□□□□□ -2.03
TUBE1-209ENST00000604814 LINC00959A0A1B0GUT2 108 aa2.34□□□□□ -2.03
TUBE1-209ENST00000604814 NOTCH2Q04721 2471 aa2.34□□□□□ -2.04
TUBE1-209ENST00000604814 CADP27708 2225 aa2.33□□□□□ -2.04
TUBE1-209ENST00000604814 KIAA0556O60303 1618 aa2.32□□□□□ -2.04
TUBE1-209ENST00000604814 FXYD6Q9H0Q3 95 aa2.32□□□□□ -2.04
TUBE1-209ENST00000604814 CFAP43Q8NDM7 1665 aa2.32□□□□□ -2.04
TUBE1-209ENST00000604814 CICQ96RK0 1608 aaPredicted RBP2.32□□□□□ -2.04
TUBE1-209ENST00000604814 PARP4Q9UKK3 1724 aaKnown RBP2.31□□□□□ -2.04
TUBE1-209ENST00000604814 ALS2Q96Q42 1657 aa2.31□□□□□ -2.04
TUBE1-209ENST00000604814 SNRPGP15A8MWD9 76 aa2.31□□□□□ -2.04
TUBE1-209ENST00000604814 NESP48681 1621 aa2.31□□□□□ -2.04
TUBE1-209ENST00000604814 KMT2BQ9UMN6 2715 aaPredicted RBP2.3□□□□□ -2.04
TUBE1-209ENST00000604814 COL14A1Q05707 1796 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms