RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 Q8N814 137 aa10.58□□□□□ -0.72
LYSMD4-211ENST00000604213 CSNK1G2-AS1Q8NCQ2 148 aa10.58□□□□□ -0.72
LYSMD4-211ENST00000604213 JMJD7-PLA2G4BH0Y9G9 81 aa10.57□□□□□ -0.72
LYSMD4-211ENST00000604213 TMEM86BQ8N661 226 aa10.57□□□□□ -0.72
LYSMD4-211ENST00000604213 XCL1P47992 114 aa10.57□□□□□ -0.72
LYSMD4-211ENST00000604213 HILS1P60008 231 aa10.57□□□□□ -0.72
LYSMD4-211ENST00000604213 PRR3P79522 188 aaKnown RBP10.57□□□□□ -0.72
LYSMD4-211ENST00000604213 S100A7L2Q5SY68 101 aa10.56□□□□□ -0.72
LYSMD4-211ENST00000604213 Q8IZM0 81 aa10.56□□□□□ -0.72
LYSMD4-211ENST00000604213 C5orf47Q569G3 176 aa10.55□□□□□ -0.72
LYSMD4-211ENST00000604213 SETXQ7Z333 2677 aaKnown RBP10.55□□□□□ -0.72
LYSMD4-211ENST00000604213 CMC4P56277 68 aaPredicted RBP10.55□□□□□ -0.72
LYSMD4-211ENST00000604213 ATP5EP2Q5VTU8 51 aa10.55□□□□□ -0.72
LYSMD4-211ENST00000604213 CUBNO60494 3623 aa10.54□□□□□ -0.72
LYSMD4-211ENST00000604213 C19orf73Q9NVV2 129 aa10.54□□□□□ -0.72
LYSMD4-211ENST00000604213 ACACBO00763 2458 aa10.54□□□□□ -0.72
LYSMD4-211ENST00000604213 JMJD1CQ15652 2540 aa10.54□□□□□ -0.72
LYSMD4-211ENST00000604213 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
LYSMD4-211ENST00000604213 LYPD5Q6UWN5 251 aa10.54□□□□□ -0.72
LYSMD4-211ENST00000604213 WFDC9Q8NEX5 89 aa10.54□□□□□ -0.72
LYSMD4-211ENST00000604213 TLN2Q9Y4G6 2542 aa10.53□□□□□ -0.72
LYSMD4-211ENST00000604213 OXTP01178 125 aa10.53□□□□□ -0.72
LYSMD4-211ENST00000604213 DSCR8Q96T75 97 aa10.53□□□□□ -0.72
LYSMD4-211ENST00000604213 FAM19A1Q7Z5A9 133 aa10.52□□□□□ -0.73
LYSMD4-211ENST00000604213 NIPBLQ6KC79 2804 aaeCLIP10.52□□□□□ -0.73
LYSMD4-211ENST00000604213 NDUFC2O95298 119 aa10.52□□□□□ -0.73
LYSMD4-211ENST00000604213 CENPEQ02224 2701 aa10.51□□□□□ -0.73
LYSMD4-211ENST00000604213 GHRHP01286 108 aa10.51□□□□□ -0.73
LYSMD4-211ENST00000604213 KMT2BQ9UMN6 2715 aaPredicted RBP10.51□□□□□ -0.73
LYSMD4-211ENST00000604213 A0A1B0GUV1 79 aa10.51□□□□□ -0.73
LYSMD4-211ENST00000604213 ENHOQ6UWT2 76 aa10.51□□□□□ -0.73
LYSMD4-211ENST00000604213 MYO18BQ8IUG5 2567 aa10.51□□□□□ -0.73
LYSMD4-211ENST00000604213 TRAV23DV6A0A075B6W5 121 aa10.5□□□□□ -0.73
LYSMD4-211ENST00000604213 CLPSL2Q6UWE3 100 aa10.5□□□□□ -0.73
LYSMD4-211ENST00000604213 KRTAP10-9P60411 292 aa10.5□□□□□ -0.73
LYSMD4-211ENST00000604213 KIAA0087Q14695 138 aa10.5□□□□□ -0.73
LYSMD4-211ENST00000604213 DNAJC9-AS1A6NH13 148 aa10.49□□□□□ -0.73
LYSMD4-211ENST00000604213 GYPEP15421 78 aa10.49□□□□□ -0.73
LYSMD4-211ENST00000604213 IGSF10Q6WRI0 2623 aa10.49□□□□□ -0.73
LYSMD4-211ENST00000604213 DEFB130BP0DP73 79 aa10.48□□□□□ -0.73
LYSMD4-211ENST00000604213 DEFB130AP0DP74 79 aa10.48□□□□□ -0.73
LYSMD4-211ENST00000604213 TRBV10-3A0A0K0K1G6 114 aa10.48□□□□□ -0.73
LYSMD4-211ENST00000604213 IGLV1-51P01701 117 aa10.47□□□□□ -0.73
LYSMD4-211ENST00000604213 COX17Q14061 63 aa10.47□□□□□ -0.73
LYSMD4-211ENST00000604213 Q8NDZ9 215 aa10.47□□□□□ -0.73
LYSMD4-211ENST00000604213 PTPN13Q12923 2485 aa10.47□□□□□ -0.73
LYSMD4-211ENST00000604213 C6orf99Q4VX62 202 aa10.47□□□□□ -0.73
LYSMD4-211ENST00000604213 UBL5Q9BZL1 73 aa10.47□□□□□ -0.73
LYSMD4-211ENST00000604213 NF1P21359 2839 aa10.46□□□□□ -0.73
LYSMD4-211ENST00000604213 NAV2Q8IVL1 2488 aa10.46□□□□□ -0.73
LYSMD4-211ENST00000604213 DEFB113Q30KQ7 82 aa10.46□□□□□ -0.74
LYSMD4-211ENST00000604213 LINC00612Q8N6U2 182 aa10.46□□□□□ -0.74
LYSMD4-211ENST00000604213 RNASE1P07998 156 aaKnown RBP10.45□□□□□ -0.74
LYSMD4-211ENST00000604213 LINC00575Q6W349 94 aa10.45□□□□□ -0.74
LYSMD4-211ENST00000604213 LRRK2Q5S007 2527 aa10.45□□□□□ -0.74
LYSMD4-211ENST00000604213 NDUFC2-KCTD14E9PQ53 114 aa10.45□□□□□ -0.74
LYSMD4-211ENST00000604213 C9orf116Q5BN46 136 aaPredicted RBP10.45□□□□□ -0.74
LYSMD4-211ENST00000604213 ESM1Q9NQ30 184 aa10.45□□□□□ -0.74
LYSMD4-211ENST00000604213 IGHV4-28A0A0C4DH34 117 aa10.44□□□□□ -0.74
LYSMD4-211ENST00000604213 CD164L2Q6UWJ8 174 aa10.44□□□□□ -0.74
LYSMD4-211ENST00000604213 Q6ZQT0 140 aa10.44□□□□□ -0.74
LYSMD4-211ENST00000604213 FAM208BQ5VWN6 2430 aa10.44□□□□□ -0.74
LYSMD4-211ENST00000604213 A0A096LPF7 62 aa10.43□□□□□ -0.74
LYSMD4-211ENST00000604213 LINC00269Q8N2A0 174 aa10.43□□□□□ -0.74
LYSMD4-211ENST00000604213 ABCA12Q86UK0 2595 aa10.42□□□□□ -0.74
LYSMD4-211ENST00000604213 LOC110117498A0A087WWA1 95 aa10.42□□□□□ -0.74
LYSMD4-211ENST00000604213 RBM3P98179 157 aaKnown RBP10.42□□□□□ -0.74
LYSMD4-211ENST00000604213 USP24Q9UPU5 2620 aa10.42□□□□□ -0.74
LYSMD4-211ENST00000604213 ZNF469Q96JG9 3925 aaPredicted RBP10.42□□□□□ -0.74
LYSMD4-211ENST00000604213 SONP18583 2426 aaKnown RBP10.42□□□□□ -0.74
LYSMD4-211ENST00000604213 ZNF561-AS1K7EIQ3 104 aa10.41□□□□□ -0.74
LYSMD4-211ENST00000604213 Q5XG85 94 aa10.41□□□□□ -0.74
LYSMD4-211ENST00000604213 C20orf197Q8N268 126 aa10.41□□□□□ -0.74
LYSMD4-211ENST00000604213 CHCHD10Q8WYQ3 142 aaPredicted RBP10.41□□□□□ -0.74
LYSMD4-211ENST00000604213 KRTAP1-3Q8IUG1 177 aa10.41□□□□□ -0.74
LYSMD4-211ENST00000604213 C4orf26Q17RF5 130 aa10.4□□□□□ -0.74
LYSMD4-211ENST00000604213 C6orf223Q8N319 242 aa10.4□□□□□ -0.74
LYSMD4-211ENST00000604213 BBC3Q96PG8 261 aaPredicted RBP10.4□□□□□ -0.74
LYSMD4-211ENST00000604213 M0R2N4 97 aa10.4□□□□□ -0.74
LYSMD4-211ENST00000604213 PRO0255Q9UI72 69 aa10.4□□□□□ -0.74
LYSMD4-211ENST00000604213 IGLV10-54A0A075B6I4 117 aa10.39□□□□□ -0.75
LYSMD4-211ENST00000604213 SETD2Q9BYW2 2564 aaPredicted RBP10.39□□□□□ -0.75
LYSMD4-211ENST00000604213 Q8N3U1 123 aa10.39□□□□□ -0.75
LYSMD4-211ENST00000604213 LINC01006Q8NI28 216 aa10.39□□□□□ -0.75
LYSMD4-211ENST00000604213 BCE1O60756 84 aa10.38□□□□□ -0.75
LYSMD4-211ENST00000604213 LINC01547P58512 204 aaPredicted RBP10.38□□□□□ -0.75
LYSMD4-211ENST00000604213 LAMTOR3Q9UHA4 124 aa10.38□□□□□ -0.75
LYSMD4-211ENST00000604213 TRAV7A0A075B6U4 112 aa10.37□□□□□ -0.75
LYSMD4-211ENST00000604213 WIPF1O43516 503 aa10.37□□□□□ -0.75
LYSMD4-211ENST00000604213 REG3AQ06141 175 aa10.36□□□□□ -0.75
LYSMD4-211ENST00000604213 C10orf25Q5T742 122 aa10.36□□□□□ -0.75
LYSMD4-211ENST00000604213 Q6ZVQ6 151 aa10.36□□□□□ -0.75
LYSMD4-211ENST00000604213 LINC00482Q8N8I6 264 aa10.36□□□□□ -0.75
LYSMD4-211ENST00000604213 X6R8D5 127 aa10.36□□□□□ -0.75
LYSMD4-211ENST00000604213 FAM236DA0A1B0GTK5 79 aa10.36□□□□□ -0.75
LYSMD4-211ENST00000604213 ANGP03950 147 aaKnown RBP10.36□□□□□ -0.75
LYSMD4-211ENST00000604213 FAM236CP0DP71 79 aa10.36□□□□□ -0.75
LYSMD4-211ENST00000604213 SPATA3Q8NHX4 192 aa10.36□□□□□ -0.75
LYSMD4-211ENST00000604213 FN1P02751 2386 aaKnown RBP10.36□□□□□ -0.75
LYSMD4-211ENST00000604213 IGLV6-57P01721 117 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms