RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 CNEP1R1Q8N9A8 125 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 LINC00308Q8TCZ7 52 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 CELSR2Q9HCU4 2923 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 ZNRD1Q9P1U0 126 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 SETD2Q9BYW2 2564 aaPredicted RBP3.31□□□□□ -1.88
LINC01109-201ENST00000603837 HECTD1Q9ULT8 2610 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 TMEM254Q8TBM7 123 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 MALRD1Q5VYJ5 2156 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 CSMD1Q96PZ7 3565 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 CSMD2Q7Z408 3487 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 IGHV1-2P23083 117 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 VPS13CQ709C8 3753 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 HRNRQ86YZ3 2850 aaPredicted RBP3.3□□□□□ -1.88
LINC01109-201ENST00000603837 LRCOL1A6NCL2 159 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 FSHBP01225 129 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 CGB3P0DN86 165 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 CGB7P0DN87 165 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 GNLYP22749 145 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 ZNF833PQ6ZTB9 187 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 ZNF702PQ9H963 129 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 CELSR1Q9NYQ6 3014 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 IGHV1OR15-1A0A075B7D0 117 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 A0A087WYN8 130 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 IGHV1-18A0A0C4DH31 117 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 hDV103S1A0JD37 113 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 A6NN06 94 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 POLR2KP53803 58 aaKnown RBP3.3□□□□□ -1.88
LINC01109-201ENST00000603837 SYCNQ0VAF6 134 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 FBXL19-AS1Q494R0 122 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 Q6ZTC4 211 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 MIR7-3HGQ8N6C7 128 aa3.3□□□□□ -1.88
LINC01109-201ENST00000603837 TRAV22A0A0B4J277 110 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 PRAC2D3DTV9 90 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 I3L2K1 104 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 IGLV2-23P01705 113 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 CTSGP08311 255 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 NREPQ16612 68 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 C9orf47Q6ZRZ4 202 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 SONP18583 2426 aaKnown RBP3.29□□□□□ -1.88
LINC01109-201ENST00000603837 ZANQ9Y493 2812 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 DOPEY1Q5JWR5 2465 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 IGLV4-3A0A075B6K6 122 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 LINC00269Q8N2A0 174 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 BBC3Q96PG8 261 aaPredicted RBP3.29□□□□□ -1.88
LINC01109-201ENST00000603837 RETNLBQ9BQ08 111 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 KRTAP4-9Q9BYQ8 210 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 ORMDL1Q9P0S3 153 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 NAV2Q8IVL1 2488 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 ABCA1O95477 2261 aa3.29□□□□□ -1.88
LINC01109-201ENST00000603837 RPL37AP8A6NKH3 93 aa3.28□□□□□ -1.88
LINC01109-201ENST00000603837 IGLV3-9A0A075B6K5 115 aa3.28□□□□□ -1.88
LINC01109-201ENST00000603837 IGHV4OR15-8A0A075B7B6 117 aa3.28□□□□□ -1.88
LINC01109-201ENST00000603837 A0A087WW49 117 aa3.28□□□□□ -1.88
LINC01109-201ENST00000603837 LECT2O14960 151 aa3.28□□□□□ -1.88
LINC01109-201ENST00000603837 NDUFA1O15239 70 aa3.28□□□□□ -1.88
LINC01109-201ENST00000603837 ERC2-IT1O76042 136 aa3.28□□□□□ -1.88
LINC01109-201ENST00000603837 CRPP02741 224 aa3.28□□□□□ -1.88
LINC01109-201ENST00000603837 ACANP16112 2415 aa3.28□□□□□ -1.88
LINC01109-201ENST00000603837 KRTAP16-1A8MUX0 517 aa3.28□□□□□ -1.89
LINC01109-201ENST00000603837 JMJD7-PLA2G4BH0Y9G9 81 aa3.28□□□□□ -1.89
LINC01109-201ENST00000603837 H0YGX0 51 aa3.28□□□□□ -1.89
LINC01109-201ENST00000603837 HAMPP81172 84 aa3.28□□□□□ -1.89
LINC01109-201ENST00000603837 SUMO4Q6EEV6 95 aa3.28□□□□□ -1.89
LINC01109-201ENST00000603837 C9orf106Q8NAJ2 232 aa3.28□□□□□ -1.89
LINC01109-201ENST00000603837 ITPR2Q14571 2701 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 SRRM5B3KS81 715 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 MRGPRG-AS1Q2M3A8 158 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 LINC00242Q5T6M2 205 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 CREBBPQ92793 2442 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 MTORP42345 2549 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 IGKV2-29A2NJV5 120 aaPredicted RBP3.27□□□□□ -1.89
LINC01109-201ENST00000603837 A6NED7 52 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 C16orf90A8MZG2 172 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 SLPIP03973 132 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 LINC01547P58512 204 aaPredicted RBP3.27□□□□□ -1.89
LINC01109-201ENST00000603837 ATP11AUNQ6ZP68 121 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 C20orf203Q8NBC4 194 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 SMAD5-AS1Q9Y6J3 95 aa3.27□□□□□ -1.89
LINC01109-201ENST00000603837 IGHV3OR16-12A0A075B7B8 117 aa3.26□□□□□ -1.89
LINC01109-201ENST00000603837 K7EIM0 57 aa3.26□□□□□ -1.89
LINC01109-201ENST00000603837 S4R3C0 116 aa3.26□□□□□ -1.89
LINC01109-201ENST00000603837 GCN1Q92616 2671 aaKnown RBP3.26□□□□□ -1.89
LINC01109-201ENST00000603837 CXCL6P80162 114 aa3.26□□□□□ -1.89
LINC01109-201ENST00000603837 RNASE13Q5GAN3 156 aaKnown RBP3.26□□□□□ -1.89
LINC01109-201ENST00000603837 KIF25-AS1Q9Y6Z4 181 aa3.26□□□□□ -1.89
LINC01109-201ENST00000603837 ANKRD17O75179 2603 aaKnown RBP3.26□□□□□ -1.89
LINC01109-201ENST00000603837 MYO9AB2RTY4 2548 aa3.26□□□□□ -1.89
LINC01109-201ENST00000603837 ABCA2Q9BZC7 2435 aa3.26□□□□□ -1.89
LINC01109-201ENST00000603837 IGHV3-38A0A0C4DH36 116 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 TRBV6-5A0A0K0K1A5 114 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 PRB1P04280 392 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 CHTF8P0CG12 524 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 RPL36AP83881 106 aaKnown RBP3.25□□□□□ -1.89
LINC01109-201ENST00000603837 PRB3Q04118 309 aaPredicted RBP3.25□□□□□ -1.89
LINC01109-201ENST00000603837 C1orf64Q8NEQ6 169 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 RPL36ALQ969Q0 106 aaKnown RBP3.25□□□□□ -1.89
LINC01109-201ENST00000603837 IGHV3-72A0A0B4J1Y9 119 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 CHKB-CPT1BH3BT56 60 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 K7EQG2 157 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms