RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 COX11Q9Y6N1 276 aa8.47□□□□□ -1.05
HERPUD2-207ENST00000603731 CXCL5P42830 114 aa8.46□□□□□ -1.06
HERPUD2-207ENST00000603731 CKS1BP61024 79 aa8.46□□□□□ -1.06
HERPUD2-207ENST00000603731 SPAG11BQ08648 103 aa8.46□□□□□ -1.06
HERPUD2-207ENST00000603731 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.06
HERPUD2-207ENST00000603731 CIRBPQ14011 172 aaKnown RBP8.46□□□□□ -1.06
HERPUD2-207ENST00000603731 MEIG1Q5JSS6 88 aa8.46□□□□□ -1.06
HERPUD2-207ENST00000603731 HIST1H4GQ99525 98 aa8.46□□□□□ -1.06
HERPUD2-207ENST00000603731 NBDYA0A0U1RRE5 68 aa8.45□□□□□ -1.06
HERPUD2-207ENST00000603731 TMEM238C9JI98 176 aa8.45□□□□□ -1.06
HERPUD2-207ENST00000603731 M0R143 59 aa8.45□□□□□ -1.06
HERPUD2-207ENST00000603731 TAL2Q16559 108 aa8.45□□□□□ -1.06
HERPUD2-207ENST00000603731 ZNF625Q96I27 306 aaPredicted RBP8.45□□□□□ -1.06
HERPUD2-207ENST00000603731 ABCA13Q86UQ4 5058 aa8.45□□□□□ -1.06
HERPUD2-207ENST00000603731 HINT1P49773 126 aaPredicted RBP8.44□□□□□ -1.06
HERPUD2-207ENST00000603731 BATFQ16520 125 aa8.44□□□□□ -1.06
HERPUD2-207ENST00000603731 ZNF561-AS1K7EIQ3 104 aa8.43□□□□□ -1.06
HERPUD2-207ENST00000603731 TIMM17BO60830 172 aa8.43□□□□□ -1.06
HERPUD2-207ENST00000603731 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
HERPUD2-207ENST00000603731 SPANXB1Q9NS25 103 aaPredicted RBP8.43□□□□□ -1.06
HERPUD2-207ENST00000603731 PSCAO43653 123 aa8.42□□□□□ -1.06
HERPUD2-207ENST00000603731 LY6G6CO95867 125 aa8.42□□□□□ -1.06
HERPUD2-207ENST00000603731 GCSHP23434 173 aa8.42□□□□□ -1.06
HERPUD2-207ENST00000603731 HIGD2BQ4VC39 106 aa8.42□□□□□ -1.06
HERPUD2-207ENST00000603731 KRTAP1-5Q9BYS1 174 aa8.42□□□□□ -1.06
HERPUD2-207ENST00000603731 BVES-AS1Q5T3Y7 98 aa8.41□□□□□ -1.06
HERPUD2-207ENST00000603731 C2orf82Q6UX34 121 aa8.41□□□□□ -1.06
HERPUD2-207ENST00000603731 CEND1Q8N111 149 aa8.41□□□□□ -1.06
HERPUD2-207ENST00000603731 A0A0U1RRA0 63 aa8.4□□□□□ -1.06
HERPUD2-207ENST00000603731 M0R2N4 97 aa8.4□□□□□ -1.06
HERPUD2-207ENST00000603731 PTTG1IPP53801 180 aa8.4□□□□□ -1.06
HERPUD2-207ENST00000603731 LINC00158P58513 81 aa8.4□□□□□ -1.06
HERPUD2-207ENST00000603731 Q6ZVH6 145 aa8.4□□□□□ -1.06
HERPUD2-207ENST00000603731 C15orf56Q8N910 161 aa8.4□□□□□ -1.06
HERPUD2-207ENST00000603731 NTN5Q8WTR8 489 aaPredicted RBP8.4□□□□□ -1.06
HERPUD2-207ENST00000603731 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.06
HERPUD2-207ENST00000603731 SPANXDQ9BXN6 97 aa8.4□□□□□ -1.06
HERPUD2-207ENST00000603731 SNHG12Q9BXW3 62 aa8.4□□□□□ -1.06
HERPUD2-207ENST00000603731 SPANXCQ9NY87 97 aa8.4□□□□□ -1.06
HERPUD2-207ENST00000603731 USP17L23D6RBM5 183 aa8.39□□□□□ -1.07
HERPUD2-207ENST00000603731 F8WDY8 70 aa8.39□□□□□ -1.07
HERPUD2-207ENST00000603731 SMIM13P0DJ93 91 aa8.39□□□□□ -1.07
HERPUD2-207ENST00000603731 C6orf223Q8N319 242 aa8.39□□□□□ -1.07
HERPUD2-207ENST00000603731 C2orf48Q96LS8 159 aa8.39□□□□□ -1.07
HERPUD2-207ENST00000603731 CAMK2N2Q96S95 79 aa8.39□□□□□ -1.07
HERPUD2-207ENST00000603731 DNAH10Q8IVF4 4471 aa8.39□□□□□ -1.07
HERPUD2-207ENST00000603731 GVQW2A0A096LPI5 108 aaPredicted RBP8.38□□□□□ -1.07
HERPUD2-207ENST00000603731 EREGO14944 169 aa8.38□□□□□ -1.07
HERPUD2-207ENST00000603731 PFN2P35080 140 aa8.38□□□□□ -1.07
HERPUD2-207ENST00000603731 UNQ6190/PRO20217Q6UXQ8 127 aa8.38□□□□□ -1.07
HERPUD2-207ENST00000603731 COPS9Q8WXC6 57 aa8.38□□□□□ -1.07
HERPUD2-207ENST00000603731 LINC00476Q8WZB0 136 aa8.38□□□□□ -1.07
HERPUD2-207ENST00000603731 LITAFQ99732 161 aa8.38□□□□□ -1.07
HERPUD2-207ENST00000603731 ERG28Q9UKR5 140 aa8.38□□□□□ -1.07
HERPUD2-207ENST00000603731 TMEM238LA0A1B0GVL6 79 aa8.37□□□□□ -1.07
HERPUD2-207ENST00000603731 A6NJY4 79 aa8.37□□□□□ -1.07
HERPUD2-207ENST00000603731 IFITM1P13164 125 aa8.37□□□□□ -1.07
HERPUD2-207ENST00000603731 ADAMTSL4-AS1Q5T5F5 129 aa8.37□□□□□ -1.07
HERPUD2-207ENST00000603731 A6NDN8 102 aa8.36□□□□□ -1.07
HERPUD2-207ENST00000603731 FXYD2P54710 66 aa8.36□□□□□ -1.07
HERPUD2-207ENST00000603731 NPC2P61916 151 aa8.36□□□□□ -1.07
HERPUD2-207ENST00000603731 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
HERPUD2-207ENST00000603731 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
HERPUD2-207ENST00000603731 DAND5Q8N907 189 aa8.36□□□□□ -1.07
HERPUD2-207ENST00000603731 TRBV30A0A0K0K1B3 111 aa8.35□□□□□ -1.07
HERPUD2-207ENST00000603731 LECT2O14960 151 aa8.35□□□□□ -1.07
HERPUD2-207ENST00000603731 COX17Q14061 63 aa8.35□□□□□ -1.07
HERPUD2-207ENST00000603731 C14orf177Q52M58 125 aa8.35□□□□□ -1.07
HERPUD2-207ENST00000603731 C10orf25Q5T742 122 aa8.35□□□□□ -1.07
HERPUD2-207ENST00000603731 MIR7-3HGQ8N6C7 128 aa8.35□□□□□ -1.07
HERPUD2-207ENST00000603731 SYCNQ0VAF6 134 aa8.34□□□□□ -1.07
HERPUD2-207ENST00000603731 COL5A1-AS1Q5SY13 56 aa8.34□□□□□ -1.07
HERPUD2-207ENST00000603731 LBHQ53QV2 105 aaPredicted RBP8.33□□□□□ -1.08
HERPUD2-207ENST00000603731 C9orf116Q5BN46 136 aaPredicted RBP8.33□□□□□ -1.08
HERPUD2-207ENST00000603731 Q6ZR54 194 aa8.33□□□□□ -1.08
HERPUD2-207ENST00000603731 Q6ZRU5 148 aa8.33□□□□□ -1.08
HERPUD2-207ENST00000603731 LINC00308Q8TCZ7 52 aa8.33□□□□□ -1.08
HERPUD2-207ENST00000603731 CARD19Q96LW7 228 aa8.33□□□□□ -1.08
HERPUD2-207ENST00000603731 NHP2Q9NX24 153 aaKnown RBP8.33□□□□□ -1.08
HERPUD2-207ENST00000603731 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
HERPUD2-207ENST00000603731 KMT2AQ03164 3969 aa8.31□□□□□ -1.08
HERPUD2-207ENST00000603731 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.31□□□□□ -1.08
HERPUD2-207ENST00000603731 A4D1N5 150 aa8.31□□□□□ -1.08
HERPUD2-207ENST00000603731 C1orf134Q5TEV5 83 aa8.31□□□□□ -1.08
HERPUD2-207ENST00000603731 RNF151Q2KHN1 245 aa8.3□□□□□ -1.08
HERPUD2-207ENST00000603731 Q6ZRN7 208 aaPredicted RBP8.3□□□□□ -1.08
HERPUD2-207ENST00000603731 PPDPFQ9H3Y8 114 aa8.3□□□□□ -1.08
HERPUD2-207ENST00000603731 WFDC2Q14508 124 aa8.29□□□□□ -1.08
HERPUD2-207ENST00000603731 SOSTDC1Q6X4U4 206 aa8.29□□□□□ -1.08
HERPUD2-207ENST00000603731 RAB37Q96AX2 223 aa8.29□□□□□ -1.08
HERPUD2-207ENST00000603731 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
HERPUD2-207ENST00000603731 VPS13DQ5THJ4 4388 aa8.28□□□□□ -1.08
HERPUD2-207ENST00000603731 LRCOL1A6NCL2 159 aa8.27□□□□□ -1.09
HERPUD2-207ENST00000603731 NDUFC2-KCTD14E9PQ53 114 aa8.27□□□□□ -1.09
HERPUD2-207ENST00000603731 K7ERJ3 54 aa8.27□□□□□ -1.09
HERPUD2-207ENST00000603731 CFC1BP0CG36 223 aa8.27□□□□□ -1.09
HERPUD2-207ENST00000603731 CFC1P0CG37 223 aa8.27□□□□□ -1.09
HERPUD2-207ENST00000603731 HERC1Q15751 4861 aa8.27□□□□□ -1.09
HERPUD2-207ENST00000603731 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.26□□□□□ -1.09
HERPUD2-207ENST00000603731 A0A0B4J2C4 111 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms