RNA–Protein interactions for RNA: ENST00000603552.1

FOCAD-205, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-205ENST00000603552 SHANK1Q9Y566 2161 aa2.85□□□□□ -1.95
FOCAD-205ENST00000603552 LOC285556D6RIA3 1793 aa2.84□□□□□ -1.95
FOCAD-205ENST00000603552 SETD2Q9BYW2 2564 aaPredicted RBP2.84□□□□□ -1.95
FOCAD-205ENST00000603552 TRAV22A0A0B4J277 110 aa2.84□□□□□ -1.95
FOCAD-205ENST00000603552 F2Z2F3 143 aa2.84□□□□□ -1.95
FOCAD-205ENST00000603552 CHKB-CPT1BH3BT56 60 aa2.84□□□□□ -1.95
FOCAD-205ENST00000603552 ZNF56Q15929 161 aa2.84□□□□□ -1.95
FOCAD-205ENST00000603552 CFAP126Q5VTH2 177 aa2.84□□□□□ -1.95
FOCAD-205ENST00000603552 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.84□□□□□ -1.95
FOCAD-205ENST00000603552 ZNF833PQ6ZTB9 187 aa2.84□□□□□ -1.95
FOCAD-205ENST00000603552 Q8N6K4 173 aa2.84□□□□□ -1.95
FOCAD-205ENST00000603552 PRO1854Q9UHT4 67 aa2.84□□□□□ -1.95
FOCAD-205ENST00000603552 MYOFQ9NZM1 2061 aa2.84□□□□□ -1.95
FOCAD-205ENST00000603552 RP1P56715 2156 aa2.84□□□□□ -1.96
FOCAD-205ENST00000603552 MYO7AQ13402 2215 aa2.83□□□□□ -1.96
FOCAD-205ENST00000603552 TRBV7-3A0A075B6L6 115 aa2.83□□□□□ -1.96
FOCAD-205ENST00000603552 EDDM3BP56851 147 aa2.83□□□□□ -1.96
FOCAD-205ENST00000603552 TIMM21Q9BVV7 248 aa2.83□□□□□ -1.96
FOCAD-205ENST00000603552 CCL26Q9Y258 94 aa2.83□□□□□ -1.96
FOCAD-205ENST00000603552 NAV3Q8IVL0 2385 aa2.83□□□□□ -1.96
FOCAD-205ENST00000603552 SHROOM3Q8TF72 1996 aa2.83□□□□□ -1.96
FOCAD-205ENST00000603552 A0A1B0GUL6 1792 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 SIPA1L3O60292 1781 aaPredicted RBP2.82□□□□□ -1.96
FOCAD-205ENST00000603552 NF1P21359 2839 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 A0A087WWC5 75 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 SMIM11AP58511 58 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 UBE2D3P61077 147 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 UBE2D2P62837 147 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 Q5VV11 94 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 KRTAP26-1Q6PEX3 210 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 LINC00643Q86TS7 51 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 C22orf24Q9Y442 160 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 MED13Q9UHV7 2174 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 SIP14410 1827 aa2.82□□□□□ -1.96
FOCAD-205ENST00000603552 ACYP1P07311 99 aa2.81□□□□□ -1.96
FOCAD-205ENST00000603552 SFTA3P0C7M3 94 aa2.81□□□□□ -1.96
FOCAD-205ENST00000603552 ELOBQ15370 118 aa2.81□□□□□ -1.96
FOCAD-205ENST00000603552 ZNF818PQ6ZRF7 136 aa2.81□□□□□ -1.96
FOCAD-205ENST00000603552 VMO1Q7Z5L0 202 aa2.81□□□□□ -1.96
FOCAD-205ENST00000603552 FAM167A-AS1Q96KT0 104 aa2.81□□□□□ -1.96
FOCAD-205ENST00000603552 Q9BRP9 147 aa2.81□□□□□ -1.96
FOCAD-205ENST00000603552 DOCK11Q5JSL3 2073 aa2.81□□□□□ -1.96
FOCAD-205ENST00000603552 PTPRQQ9UMZ3 2332 aa2.8□□□□□ -1.96
FOCAD-205ENST00000603552 DOPEY2Q9Y3R5 2298 aa2.8□□□□□ -1.96
FOCAD-205ENST00000603552 CEP192Q8TEP8 1941 aa2.8□□□□□ -1.96
FOCAD-205ENST00000603552 SDHAF1A6NFY7 115 aa2.8□□□□□ -1.96
FOCAD-205ENST00000603552 TMEM170BQ5T4T1 132 aa2.8□□□□□ -1.96
FOCAD-205ENST00000603552 LIMD2Q9BT23 127 aa2.8□□□□□ -1.96
FOCAD-205ENST00000603552 PCNX1Q96RV3 2341 aa2.79□□□□□ -1.96
FOCAD-205ENST00000603552 TRAV23DV6A0A075B6W5 121 aa2.79□□□□□ -1.96
FOCAD-205ENST00000603552 TRBV10-1A0A0K0K1A3 114 aa2.79□□□□□ -1.96
FOCAD-205ENST00000603552 UBE2D1P51668 147 aa2.79□□□□□ -1.96
FOCAD-205ENST00000603552 KLKP1Q107X0 134 aa2.79□□□□□ -1.96
FOCAD-205ENST00000603552 C1orf137Q5JT78 98 aa2.79□□□□□ -1.96
FOCAD-205ENST00000603552 TET1Q8NFU7 2136 aa2.79□□□□□ -1.96
FOCAD-205ENST00000603552 LINC01600Q96MT4 127 aa2.79□□□□□ -1.96
FOCAD-205ENST00000603552 MRPL36Q9P0J6 103 aaKnown RBP2.79□□□□□ -1.96
FOCAD-205ENST00000603552 SPTBP11277 2137 aa2.78□□□□□ -1.96
FOCAD-205ENST00000603552 SPG11Q96JI7 2443 aa2.78□□□□□ -1.96
FOCAD-205ENST00000603552 IQCF6A8MYZ5 107 aa2.78□□□□□ -1.96
FOCAD-205ENST00000603552 F8WEM9 126 aa2.78□□□□□ -1.96
FOCAD-205ENST00000603552 HCP5Q6MZN7 132 aa2.78□□□□□ -1.96
FOCAD-205ENST00000603552 C20orf197Q8N268 126 aa2.78□□□□□ -1.96
FOCAD-205ENST00000603552 ITPR2Q14571 2701 aa2.78□□□□□ -1.96
FOCAD-205ENST00000603552 SPENQ96T58 3664 aaKnown RBP2.78□□□□□ -1.97
FOCAD-205ENST00000603552 CSMD1Q96PZ7 3565 aa2.77□□□□□ -1.97
FOCAD-205ENST00000603552 TRBV25-1A0A075B6N4 114 aa2.77□□□□□ -1.97
FOCAD-205ENST00000603552 BCE1O60756 84 aa2.77□□□□□ -1.97
FOCAD-205ENST00000603552 COX6CP09669 75 aa2.77□□□□□ -1.97
FOCAD-205ENST00000603552 CNBPP62633 177 aaKnown RBP2.77□□□□□ -1.97
FOCAD-205ENST00000603552 DEFB103AP81534 67 aa2.77□□□□□ -1.97
FOCAD-205ENST00000603552 PDE6HQ13956 83 aa2.77□□□□□ -1.97
FOCAD-205ENST00000603552 PRO2289Q9P1D8 64 aa2.77□□□□□ -1.97
FOCAD-205ENST00000603552 UTP20O75691 2785 aaKnown RBP2.77□□□□□ -1.97
FOCAD-205ENST00000603552 LAMA1P25391 3075 aa2.77□□□□□ -1.97
FOCAD-205ENST00000603552 LRBAP50851 2863 aa2.76□□□□□ -1.97
FOCAD-205ENST00000603552 ATMQ13315 3056 aa2.76□□□□□ -1.97
FOCAD-205ENST00000603552 NUPR2A6NF83 97 aa2.76□□□□□ -1.97
FOCAD-205ENST00000603552 FAM223BA6NKX1 122 aa2.76□□□□□ -1.97
FOCAD-205ENST00000603552 C10orf142B7Z368 130 aa2.76□□□□□ -1.97
FOCAD-205ENST00000603552 IGHV3-33P01772 117 aa2.76□□□□□ -1.97
FOCAD-205ENST00000603552 SPINT3P49223 89 aa2.76□□□□□ -1.97
FOCAD-205ENST00000603552 Q6ZTI0 123 aa2.76□□□□□ -1.97
FOCAD-205ENST00000603552 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
FOCAD-205ENST00000603552 NDUFA11Q86Y39 141 aa2.76□□□□□ -1.97
FOCAD-205ENST00000603552 MGAQ8IWI9 3026 aa2.76□□□□□ -1.97
FOCAD-205ENST00000603552 TLN1Q9Y490 2541 aaKnown RBP2.75□□□□□ -1.97
FOCAD-205ENST00000603552 URB1O60287 2271 aaKnown RBP2.75□□□□□ -1.97
FOCAD-205ENST00000603552 TRBV6-8A0A0A6YYG3 113 aa2.75□□□□□ -1.97
FOCAD-205ENST00000603552 ZNF815PA8K554 130 aa2.75□□□□□ -1.97
FOCAD-205ENST00000603552 TMEM14DPA8MWL7 114 aa2.75□□□□□ -1.97
FOCAD-205ENST00000603552 HMGN2P05204 90 aaKnown RBP2.75□□□□□ -1.97
FOCAD-205ENST00000603552 DMAC1Q96GE9 116 aa2.75□□□□□ -1.97
FOCAD-205ENST00000603552 NDUFA4L2Q9NRX3 87 aa2.75□□□□□ -1.97
FOCAD-205ENST00000603552 PSENENQ9NZ42 101 aa2.75□□□□□ -1.97
FOCAD-205ENST00000603552 ORMDL1Q9P0S3 153 aa2.75□□□□□ -1.97
FOCAD-205ENST00000603552 HILPDAQ9Y5L2 63 aa2.75□□□□□ -1.97
FOCAD-205ENST00000603552 FLNCQ14315 2725 aa2.75□□□□□ -1.97
FOCAD-205ENST00000603552 CR1P17927 2039 aa2.75□□□□□ -1.97
FOCAD-205ENST00000603552 COL6A6A6NMZ7 2263 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms