RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 H3BRN7 92 aa3.38□□□□□ -1.87
SPTBN1-206ENST00000602898 PSCAO43653 123 aa3.38□□□□□ -1.87
SPTBN1-206ENST00000602898 LY6HO94772 140 aa3.38□□□□□ -1.87
SPTBN1-206ENST00000602898 NDPQ00604 133 aa3.38□□□□□ -1.87
SPTBN1-206ENST00000602898 CIRBP-AS1Q8TBR5 109 aa3.38□□□□□ -1.87
SPTBN1-206ENST00000602898 LIMD2Q9BT23 127 aa3.38□□□□□ -1.87
SPTBN1-206ENST00000602898 NBEAQ8NFP9 2946 aa3.38□□□□□ -1.87
SPTBN1-206ENST00000602898 NPBQ8NG41 125 aa3.38□□□□□ -1.87
SPTBN1-206ENST00000602898 F5P12259 2224 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 IGHV7-4-1A0A0J9YVY3 117 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 H0YGX0 51 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 CHKB-CPT1BH3BT56 60 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 CDC42SE1Q9NRR8 79 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 ASXL3Q9C0F0 2248 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 GCN1Q92616 2671 aaKnown RBP3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 ZFHX4Q86UP3 3567 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 IGHV3-49A0A0A0MS15 119 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 TRBV6-8A0A0A6YYG3 113 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 IGHV1-18A0A0C4DH31 117 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 SRRM5B3KS81 715 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 C19orf84I3L1E1 186 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 IGLV1-51P01701 117 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 LINC00574Q9H8X3 128 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 ORMDL1Q9P0S3 153 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 UBR5O95071 2799 aaPredicted RBP3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 A0A087X002 238 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 NCR3O14931 201 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 CRPP02741 224 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 MIR7-3HGQ8N6C7 128 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 LINC00308Q8TCZ7 52 aa3.37□□□□□ -1.87
SPTBN1-206ENST00000602898 FRYQ5TBA9 3013 aa3.36□□□□□ -1.87
SPTBN1-206ENST00000602898 CFAP47Q6ZTR5 3102 aa3.36□□□□□ -1.87
SPTBN1-206ENST00000602898 DOCK10Q96BY6 2186 aa3.36□□□□□ -1.87
SPTBN1-206ENST00000602898 IGHV3-64A0A075B6Q5 118 aa3.36□□□□□ -1.87
SPTBN1-206ENST00000602898 TRAV21A0A0B4J279 112 aa3.36□□□□□ -1.87
SPTBN1-206ENST00000602898 IGKV1-17P01599 117 aa3.36□□□□□ -1.87
SPTBN1-206ENST00000602898 APELAP0DMC3 54 aa3.36□□□□□ -1.87
SPTBN1-206ENST00000602898 MRGPRG-AS1Q2M3A8 158 aa3.36□□□□□ -1.87
SPTBN1-206ENST00000602898 TLX1NBP0CAT3 122 aa3.36□□□□□ -1.87
SPTBN1-206ENST00000602898 ASB16-AS1Q495Z4 193 aa3.36□□□□□ -1.87
SPTBN1-206ENST00000602898 RPL39LQ96EH5 51 aaKnown RBP3.36□□□□□ -1.87
SPTBN1-206ENST00000602898 FASNP49327 2511 aaKnown RBP3.35□□□□□ -1.87
SPTBN1-206ENST00000602898 NDUFA1O15239 70 aa3.35□□□□□ -1.87
SPTBN1-206ENST00000602898 FRYLO94915 3013 aa3.35□□□□□ -1.87
SPTBN1-206ENST00000602898 COL6A6A6NMZ7 2263 aa3.35□□□□□ -1.87
SPTBN1-206ENST00000602898 LAMA1P25391 3075 aa3.35□□□□□ -1.87
SPTBN1-206ENST00000602898 CNOT1A5YKK6 2376 aaKnown RBP3.35□□□□□ -1.87
SPTBN1-206ENST00000602898 I3L2K1 104 aa3.35□□□□□ -1.87
SPTBN1-206ENST00000602898 IGHV3-23P01764 117 aa3.35□□□□□ -1.87
SPTBN1-206ENST00000602898 SDK1Q7Z5N4 2213 aa3.35□□□□□ -1.87
SPTBN1-206ENST00000602898 FBN3Q75N90 2809 aa3.35□□□□□ -1.87
SPTBN1-206ENST00000602898 BPY2O14599 106 aa3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 POLR2KP53803 58 aaKnown RBP3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 ROMO1P60602 79 aa3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 RPL39P62891 51 aaKnown RBP3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 C9orf116Q5BN46 136 aaPredicted RBP3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 CASC10Q5T4H9 136 aa3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 DEFB119Q8N690 84 aa3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 ANKRD11Q6UB99 2663 aaPredicted RBP3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 ZFYVE26Q68DK2 2539 aa3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 A0A087WYN8 130 aa3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 LRCOL1A6NCL2 159 aa3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 LINC00167Q96N53 147 aa3.34□□□□□ -1.87
SPTBN1-206ENST00000602898 LECT2O14960 151 aa3.33□□□□□ -1.88
SPTBN1-206ENST00000602898 KRTAP9-3Q9BYQ3 159 aa3.33□□□□□ -1.88
SPTBN1-206ENST00000602898 CDC42SE2Q9NRR3 84 aa3.33□□□□□ -1.88
SPTBN1-206ENST00000602898 FREM2Q5SZK8 3169 aa3.33□□□□□ -1.88
SPTBN1-206ENST00000602898 K7ERS5 55 aa3.33□□□□□ -1.88
SPTBN1-206ENST00000602898 MOBPQ13875 183 aa3.33□□□□□ -1.88
SPTBN1-206ENST00000602898 CEP295Q9C0D2 2601 aa3.33□□□□□ -1.88
SPTBN1-206ENST00000602898 LOC101927531A0A1B0GV80 90 aa3.33□□□□□ -1.88
SPTBN1-206ENST00000602898 IGKV2-29A2NJV5 120 aaPredicted RBP3.33□□□□□ -1.88
SPTBN1-206ENST00000602898 C9orf106Q8NAJ2 232 aa3.33□□□□□ -1.88
SPTBN1-206ENST00000602898 LOC110117498A0A087WWA1 95 aa3.32□□□□□ -1.88
SPTBN1-206ENST00000602898 LCE6AA0A183 80 aa3.32□□□□□ -1.88
SPTBN1-206ENST00000602898 K7EIM0 57 aa3.32□□□□□ -1.88
SPTBN1-206ENST00000602898 GAFA1Q96PS6 74 aa3.32□□□□□ -1.88
SPTBN1-206ENST00000602898 IGF2RP11717 2491 aa3.32□□□□□ -1.88
SPTBN1-206ENST00000602898 ABCA1O95477 2261 aa3.32□□□□□ -1.88
SPTBN1-206ENST00000602898 TRBV10-1A0A0K0K1A3 114 aa3.32□□□□□ -1.88
SPTBN1-206ENST00000602898 TRBV6-5A0A0K0K1A5 114 aa3.32□□□□□ -1.88
SPTBN1-206ENST00000602898 INSP01308 110 aa3.32□□□□□ -1.88
SPTBN1-206ENST00000602898 KRTAP15-1Q3LI76 137 aa3.32□□□□□ -1.88
SPTBN1-206ENST00000602898 Q8N9P0 234 aaPredicted RBP3.32□□□□□ -1.88
SPTBN1-206ENST00000602898 MGPP08493 103 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 HAMPP81172 84 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 SPINK14Q6IE38 97 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 FDCSPQ8NFU4 85 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 HIGD2AQ9BW72 106 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 A0A1B0GVX0 72 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 IGKV3-15P01624 115 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 CCL3L1P16619 93 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 Q8NDZ9 215 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 DEFB108BQ8NET1 73 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 DEFB104AQ8WTQ1 72 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 PRR15LQ9BU68 103 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 CADP27708 2225 aa3.31□□□□□ -1.88
SPTBN1-206ENST00000602898 IGSF10Q6WRI0 2623 aa3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 ELOF1P60002 83 aaKnown RBP3.3□□□□□ -1.88
SPTBN1-206ENST00000602898 Q6ZQT0 140 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms