RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 Q8N814 137 aa6.37□□□□□ -1.39
CSMD1-216ENST00000602557 PRR3P79522 188 aaKnown RBP6.37□□□□□ -1.39
CSMD1-216ENST00000602557 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-216ENST00000602557 PRM2P04554 102 aa6.36□□□□□ -1.39
CSMD1-216ENST00000602557 RETNLBQ9BQ08 111 aa6.36□□□□□ -1.39
CSMD1-216ENST00000602557 ZNF580Q9UK33 172 aa6.36□□□□□ -1.39
CSMD1-216ENST00000602557 SYCNQ0VAF6 134 aa6.35□□□□□ -1.39
CSMD1-216ENST00000602557 BBC3Q96PG8 261 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-216ENST00000602557 LY6LH3BQJ8 138 aa6.35□□□□□ -1.39
CSMD1-216ENST00000602557 RPL37AP8A6NKH3 93 aa6.35□□□□□ -1.39
CSMD1-216ENST00000602557 IL17DQ8TAD2 202 aa6.35□□□□□ -1.39
CSMD1-216ENST00000602557 INAFM1C9JVW0 142 aa6.35□□□□□ -1.39
CSMD1-216ENST00000602557 LINC01561Q8N1V8 128 aa6.34□□□□□ -1.39
CSMD1-216ENST00000602557 LOC100131303A0A0U1RQF7 123 aa6.34□□□□□ -1.39
CSMD1-216ENST00000602557 C9orf116Q5BN46 136 aaPredicted RBP6.34□□□□□ -1.39
CSMD1-216ENST00000602557 SMCPP49901 116 aaPredicted RBP6.34□□□□□ -1.4
CSMD1-216ENST00000602557 CD164L2Q6UWJ8 174 aa6.34□□□□□ -1.4
CSMD1-216ENST00000602557 RNASE3P12724 160 aaKnown RBP6.33□□□□□ -1.4
CSMD1-216ENST00000602557 DHRS4-AS1Q9P1J3 65 aa6.33□□□□□ -1.4
CSMD1-216ENST00000602557 LINC01547P58512 204 aaPredicted RBP6.33□□□□□ -1.4
CSMD1-216ENST00000602557 FAM19A4Q96LR4 140 aa6.33□□□□□ -1.4
CSMD1-216ENST00000602557 IGIPA6NJ69 53 aa6.33□□□□□ -1.4
CSMD1-216ENST00000602557 UBE2D4Q9Y2X8 147 aa6.33□□□□□ -1.4
CSMD1-216ENST00000602557 RPS28P62857 69 aaKnown RBP6.32□□□□□ -1.4
CSMD1-216ENST00000602557 A0A096LNJ9 63 aa6.32□□□□□ -1.4
CSMD1-216ENST00000602557 IGLV2-18A0A075B6J9 118 aa6.32□□□□□ -1.4
CSMD1-216ENST00000602557 PLAC8L1A1L4L8 177 aa6.32□□□□□ -1.4
CSMD1-216ENST00000602557 H0Y9P7 68 aa6.32□□□□□ -1.4
CSMD1-216ENST00000602557 PRO0461Q9UI25 63 aa6.32□□□□□ -1.4
CSMD1-216ENST00000602557 DEFB116Q30KQ4 102 aa6.32□□□□□ -1.4
CSMD1-216ENST00000602557 KPRPQ5T749 579 aaPredicted RBP6.32□□□□□ -1.4
CSMD1-216ENST00000602557 TRBV6-4A0A1B0GX49 114 aa6.32□□□□□ -1.4
CSMD1-216ENST00000602557 C18orf65Q6ZTR6 163 aa6.32□□□□□ -1.4
CSMD1-216ENST00000602557 C7orf33Q8WU49 177 aa6.32□□□□□ -1.4
CSMD1-216ENST00000602557 IGLV9-49A0A0B4J1Y8 123 aa6.31□□□□□ -1.4
CSMD1-216ENST00000602557 COX6A2Q02221 97 aa6.31□□□□□ -1.4
CSMD1-216ENST00000602557 M0R2N4 97 aa6.31□□□□□ -1.4
CSMD1-216ENST00000602557 FLNAP21333 2647 aaKnown RBP6.31□□□□□ -1.4
CSMD1-216ENST00000602557 MDFIQ99750 246 aa6.3□□□□□ -1.4
CSMD1-216ENST00000602557 SPAG11AQ6PDA7 123 aa6.3□□□□□ -1.4
CSMD1-216ENST00000602557 Q6ZVQ6 151 aa6.3□□□□□ -1.4
CSMD1-216ENST00000602557 KLLNB2CW77 178 aa6.3□□□□□ -1.4
CSMD1-216ENST00000602557 M0R378 163 aa6.3□□□□□ -1.4
CSMD1-216ENST00000602557 SPINK1P00995 79 aa6.3□□□□□ -1.4
CSMD1-216ENST00000602557 POLR2KP53803 58 aaKnown RBP6.3□□□□□ -1.4
CSMD1-216ENST00000602557 PLA2G2AP14555 144 aa6.3□□□□□ -1.4
CSMD1-216ENST00000602557 RPL28P46779 137 aaKnown RBP6.29□□□□□ -1.4
CSMD1-216ENST00000602557 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.29□□□□□ -1.4
CSMD1-216ENST00000602557 TRAV10A0A0B4J240 114 aa6.29□□□□□ -1.4
CSMD1-216ENST00000602557 LIMD2Q9BT23 127 aa6.29□□□□□ -1.4
CSMD1-216ENST00000602557 COX17Q14061 63 aa6.29□□□□□ -1.4
CSMD1-216ENST00000602557 LINC00959A0A1B0GUT2 108 aa6.28□□□□□ -1.4
CSMD1-216ENST00000602557 ZNF702PQ9H963 129 aa6.28□□□□□ -1.4
CSMD1-216ENST00000602557 FSTL3O95633 263 aa6.28□□□□□ -1.4
CSMD1-216ENST00000602557 EP400Q96L91 3159 aa6.28□□□□□ -1.4
CSMD1-216ENST00000602557 A8MTW9 85 aa6.28□□□□□ -1.4
CSMD1-216ENST00000602557 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
CSMD1-216ENST00000602557 C1orf137Q5JT78 98 aa6.28□□□□□ -1.4
CSMD1-216ENST00000602557 C10orf25Q5T742 122 aa6.28□□□□□ -1.4
CSMD1-216ENST00000602557 LELP1Q5T871 98 aa6.28□□□□□ -1.4
CSMD1-216ENST00000602557 C11orf71Q6IPW1 123 aa6.28□□□□□ -1.4
CSMD1-216ENST00000602557 TRBV10-3A0A0K0K1G6 114 aa6.27□□□□□ -1.41
CSMD1-216ENST00000602557 LINC00242Q5T6M2 205 aa6.26□□□□□ -1.41
CSMD1-216ENST00000602557 IGHV6-1A0A0B4J1U7 121 aa6.26□□□□□ -1.41
CSMD1-216ENST00000602557 ITPR3Q14573 2671 aa6.26□□□□□ -1.41
CSMD1-216ENST00000602557 CXCL6P80162 114 aa6.26□□□□□ -1.41
CSMD1-216ENST00000602557 CFAP46Q8IYW2 2715 aa6.26□□□□□ -1.41
CSMD1-216ENST00000602557 SMIM29Q86T20 159 aa6.26□□□□□ -1.41
CSMD1-216ENST00000602557 LY6G6DO95868 133 aa6.26□□□□□ -1.41
CSMD1-216ENST00000602557 LINC00575Q6W349 94 aa6.26□□□□□ -1.41
CSMD1-216ENST00000602557 PSMG3-AS1Q96PY0 264 aa6.26□□□□□ -1.41
CSMD1-216ENST00000602557 HCG22E2RYF7 251 aa6.25□□□□□ -1.41
CSMD1-216ENST00000602557 C1orf64Q8NEQ6 169 aa6.25□□□□□ -1.41
CSMD1-216ENST00000602557 CNFNQ9BYD5 112 aa6.25□□□□□ -1.41
CSMD1-216ENST00000602557 CYSRT1A8MQ03 144 aa6.25□□□□□ -1.41
CSMD1-216ENST00000602557 Q8IZM0 81 aa6.25□□□□□ -1.41
CSMD1-216ENST00000602557 X6R8D5 127 aa6.25□□□□□ -1.41
CSMD1-216ENST00000602557 SMIM1B2RUZ4 78 aa6.25□□□□□ -1.41
CSMD1-216ENST00000602557 SBSPONQ8IVN8 264 aa6.25□□□□□ -1.41
CSMD1-216ENST00000602557 LINC00474Q9P2X8 69 aa6.24□□□□□ -1.41
CSMD1-216ENST00000602557 FHL2Q14192 279 aa6.24□□□□□ -1.41
CSMD1-216ENST00000602557 SRCAPQ6ZRS2 3230 aa6.24□□□□□ -1.41
CSMD1-216ENST00000602557 IGLV1-40P01703 118 aa6.23□□□□□ -1.41
CSMD1-216ENST00000602557 CDC42SE2Q9NRR3 84 aa6.23□□□□□ -1.41
CSMD1-216ENST00000602557 MAP1AP78559 2803 aaPredicted RBP6.23□□□□□ -1.41
CSMD1-216ENST00000602557 LINC00337Q8N6G1 96 aa6.23□□□□□ -1.41
CSMD1-216ENST00000602557 SMCR5Q8TEV8 140 aa6.23□□□□□ -1.41
CSMD1-216ENST00000602557 UNQ6190/PRO20217Q6UXQ8 127 aa6.23□□□□□ -1.41
CSMD1-216ENST00000602557 LINC01006Q8NI28 216 aa6.23□□□□□ -1.41
CSMD1-216ENST00000602557 LINC00336Q6ZUF6 198 aa6.23□□□□□ -1.41
CSMD1-216ENST00000602557 FHL3Q13643 280 aa6.22□□□□□ -1.41
CSMD1-216ENST00000602557 LY6G6CO95867 125 aa6.22□□□□□ -1.41
CSMD1-216ENST00000602557 NOTCH1P46531 2555 aa6.22□□□□□ -1.41
CSMD1-216ENST00000602557 CHD6Q8TD26 2715 aa6.22□□□□□ -1.41
CSMD1-216ENST00000602557 CHCHD7Q9BUK0 85 aa6.22□□□□□ -1.41
CSMD1-216ENST00000602557 FAM218AQ96MZ4 157 aa6.22□□□□□ -1.41
CSMD1-216ENST00000602557 MUC7Q8TAX7 377 aa6.21□□□□□ -1.41
CSMD1-216ENST00000602557 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.42
CSMD1-216ENST00000602557 HELZ2Q9BYK8 2649 aaKnown RBP6.21□□□□□ -1.42
CSMD1-216ENST00000602557 F8WDY8 70 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms