RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
ZNF548-212ENST00000602086 CIRBPQ14011 172 aaKnown RBP9.58□□□□□ -0.88
ZNF548-212ENST00000602086 BVES-AS1Q5T3Y7 98 aa9.58□□□□□ -0.88
ZNF548-212ENST00000602086 CFAP161Q6P656 301 aa9.58□□□□□ -0.88
ZNF548-212ENST00000602086 LITAFQ99732 161 aa9.58□□□□□ -0.88
ZNF548-212ENST00000602086 SPANXDQ9BXN6 97 aa9.58□□□□□ -0.88
ZNF548-212ENST00000602086 SNHG12Q9BXW3 62 aa9.58□□□□□ -0.88
ZNF548-212ENST00000602086 SPANXCQ9NY87 97 aa9.58□□□□□ -0.88
ZNF548-212ENST00000602086 CEND1Q8N111 149 aa9.57□□□□□ -0.88
ZNF548-212ENST00000602086 HIST1H4GQ99525 98 aa9.57□□□□□ -0.88
ZNF548-212ENST00000602086 PPDPFQ9H3Y8 114 aa9.57□□□□□ -0.88
ZNF548-212ENST00000602086 DNAH1Q9P2D7 4330 aa9.57□□□□□ -0.88
ZNF548-212ENST00000602086 VPS13DQ5THJ4 4388 aa9.56□□□□□ -0.88
ZNF548-212ENST00000602086 NBDYA0A0U1RRE5 68 aa9.56□□□□□ -0.88
ZNF548-212ENST00000602086 HINT1P49773 126 aaPredicted RBP9.56□□□□□ -0.88
ZNF548-212ENST00000602086 PTTG1IPP53801 180 aa9.56□□□□□ -0.88
ZNF548-212ENST00000602086 SPAG11BQ08648 103 aa9.56□□□□□ -0.88
ZNF548-212ENST00000602086 SRSF9Q13242 221 aaKnown RBP eCLIP9.56□□□□□ -0.888e-6■■□□□ 11.7
ZNF548-212ENST00000602086 Q9HAA7 133 aa9.56□□□□□ -0.88
ZNF548-212ENST00000602086 GVQW2A0A096LPI5 108 aaPredicted RBP9.55□□□□□ -0.88
ZNF548-212ENST00000602086 IFITM1P13164 125 aa9.55□□□□□ -0.88
ZNF548-212ENST00000602086 CKS1BP61024 79 aa9.55□□□□□ -0.88
ZNF548-212ENST00000602086 C2orf48Q96LS8 159 aa9.55□□□□□ -0.88
ZNF548-212ENST00000602086 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
ZNF548-212ENST00000602086 GCSHP23434 173 aa9.54□□□□□ -0.88
ZNF548-212ENST00000602086 C15orf56Q8N910 161 aa9.54□□□□□ -0.88
ZNF548-212ENST00000602086 NTN5Q8WTR8 489 aaPredicted RBP9.54□□□□□ -0.88
ZNF548-212ENST00000602086 COPS9Q8WXC6 57 aa9.54□□□□□ -0.88
ZNF548-212ENST00000602086 KRTAP17-1Q9BYP8 105 aa9.54□□□□□ -0.88
ZNF548-212ENST00000602086 EREGO14944 169 aa9.53□□□□□ -0.88
ZNF548-212ENST00000602086 COX17Q14061 63 aa9.53□□□□□ -0.88
ZNF548-212ENST00000602086 TMEM238LA0A1B0GVL6 79 aa9.52□□□□□ -0.89
ZNF548-212ENST00000602086 A6NJY4 79 aa9.52□□□□□ -0.89
ZNF548-212ENST00000602086 ZNF561-AS1K7EIQ3 104 aa9.52□□□□□ -0.89
ZNF548-212ENST00000602086 MEIG1Q5JSS6 88 aa9.52□□□□□ -0.89
ZNF548-212ENST00000602086 A6NDN8 102 aa9.51□□□□□ -0.89
ZNF548-212ENST00000602086 COL5A1-AS1Q5SY13 56 aa9.51□□□□□ -0.89
ZNF548-212ENST00000602086 ADAMTSL4-AS1Q5T5F5 129 aa9.51□□□□□ -0.89
ZNF548-212ENST00000602086 ERG28Q9UKR5 140 aa9.51□□□□□ -0.89
ZNF548-212ENST00000602086 TRBV30A0A0K0K1B3 111 aa9.5□□□□□ -0.89
ZNF548-212ENST00000602086 FXYD2P54710 66 aa9.5□□□□□ -0.89
ZNF548-212ENST00000602086 RPL24P83731 157 aaKnown RBP9.5□□□□□ -0.89
ZNF548-212ENST00000602086 C2orf82Q6UX34 121 aa9.5□□□□□ -0.89
ZNF548-212ENST00000602086 A0A1B0GWB2 263 aa9.49□□□□□ -0.89
ZNF548-212ENST00000602086 SMIM13P0DJ93 91 aa9.49□□□□□ -0.89
ZNF548-212ENST00000602086 BATFQ16520 125 aa9.49□□□□□ -0.89
ZNF548-212ENST00000602086 RNF151Q2KHN1 245 aa9.48□□□□□ -0.89
ZNF548-212ENST00000602086 Q6ZR54 194 aa9.48□□□□□ -0.89
ZNF548-212ENST00000602086 MUSTN1Q8IVN3 82 aa9.48□□□□□ -0.89
ZNF548-212ENST00000602086 LOC107984156A0A0G2JMH3 177 aa9.47□□□□□ -0.89
ZNF548-212ENST00000602086 USP17L23D6RBM5 183 aa9.47□□□□□ -0.89
ZNF548-212ENST00000602086 LINC00158P58513 81 aa9.47□□□□□ -0.89
ZNF548-212ENST00000602086 UNQ6190/PRO20217Q6UXQ8 127 aa9.47□□□□□ -0.89
ZNF548-212ENST00000602086 ARL17AQ8IVW1 177 aa9.47□□□□□ -0.89
ZNF548-212ENST00000602086 C6orf223Q8N319 242 aa9.47□□□□□ -0.89
ZNF548-212ENST00000602086 LINC00308Q8TCZ7 52 aa9.47□□□□□ -0.89
ZNF548-212ENST00000602086 CAMK2N2Q96S95 79 aa9.47□□□□□ -0.89
ZNF548-212ENST00000602086 ALMS1Q8TCU4 4167 aa9.46□□□□□ -0.89
ZNF548-212ENST00000602086 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.46□□□□□ -0.9
ZNF548-212ENST00000602086 HIGD2BQ4VC39 106 aa9.46□□□□□ -0.9
ZNF548-212ENST00000602086 C14orf177Q52M58 125 aa9.46□□□□□ -0.9
ZNF548-212ENST00000602086 MIR7-3HGQ8N6C7 128 aa9.46□□□□□ -0.9
ZNF548-212ENST00000602086 LINC00476Q8WZB0 136 aa9.46□□□□□ -0.9
ZNF548-212ENST00000602086 C10orf25Q5T742 122 aa9.45□□□□□ -0.9
ZNF548-212ENST00000602086 Q6ZRN7 208 aaPredicted RBP9.45□□□□□ -0.9
ZNF548-212ENST00000602086 A4D1N5 150 aa9.44□□□□□ -0.9
ZNF548-212ENST00000602086 PSCAO43653 123 aa9.44□□□□□ -0.9
ZNF548-212ENST00000602086 SYCNQ0VAF6 134 aa9.44□□□□□ -0.9
ZNF548-212ENST00000602086 LINC00526Q96FQ7 95 aa9.44□□□□□ -0.9
ZNF548-212ENST00000602086 C6orf48Q9UBA6 75 aa9.44□□□□□ -0.9
ZNF548-212ENST00000602086 DNAH6Q9C0G6 4158 aa9.44□□□□□ -0.9
ZNF548-212ENST00000602086 A0A0B4J2C4 111 aa9.43□□□□□ -0.9
ZNF548-212ENST00000602086 PFN2P35080 140 aa9.43□□□□□ -0.9
ZNF548-212ENST00000602086 Q6ZRU5 148 aa9.43□□□□□ -0.9
ZNF548-212ENST00000602086 DAND5Q8N907 189 aa9.43□□□□□ -0.9
ZNF548-212ENST00000602086 NHP2Q9NX24 153 aaKnown RBP9.43□□□□□ -0.9
ZNF548-212ENST00000602086 A0A0U1RRA0 63 aa9.42□□□□□ -0.9
ZNF548-212ENST00000602086 SOSTDC1Q6X4U4 206 aa9.42□□□□□ -0.9
ZNF548-212ENST00000602086 TAX1BP3O14907 124 aa9.41□□□□□ -0.9
ZNF548-212ENST00000602086 LY6G6CO95867 125 aa9.41□□□□□ -0.9
ZNF548-212ENST00000602086 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
ZNF548-212ENST00000602086 CFC1BP0CG36 223 aa9.41□□□□□ -0.9
ZNF548-212ENST00000602086 CFC1P0CG37 223 aa9.41□□□□□ -0.9
ZNF548-212ENST00000602086 CNBPP62633 177 aaKnown RBP9.41□□□□□ -0.9
ZNF548-212ENST00000602086 LRCOL1A6NCL2 159 aa9.4□□□□□ -0.9
ZNF548-212ENST00000602086 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.9
ZNF548-212ENST00000602086 CARD19Q96LW7 228 aa9.4□□□□□ -0.9
ZNF548-212ENST00000602086 NDUFC2-KCTD14E9PQ53 114 aa9.39□□□□□ -0.91
ZNF548-212ENST00000602086 EIF4EBP3O60516 100 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-212ENST00000602086 NDUFC2O95298 119 aa9.39□□□□□ -0.91
ZNF548-212ENST00000602086 SND1-IT1Q9HBX3 110 aa9.39□□□□□ -0.91
ZNF548-212ENST00000602086 M0R2N4 97 aa9.38□□□□□ -0.91
ZNF548-212ENST00000602086 SLPIP03973 132 aa9.38□□□□□ -0.91
ZNF548-212ENST00000602086 NPC2P61916 151 aa9.38□□□□□ -0.91
ZNF548-212ENST00000602086 PRO1854Q9UHT4 67 aa9.38□□□□□ -0.91
ZNF548-212ENST00000602086 C9orf118A6NHY6 69 aa9.37□□□□□ -0.91
ZNF548-212ENST00000602086 WFDC2Q14508 124 aa9.37□□□□□ -0.91
ZNF548-212ENST00000602086 RAB37Q96AX2 223 aa9.37□□□□□ -0.91
ZNF548-212ENST00000602086 C1orf134Q5TEV5 83 aa9.36□□□□□ -0.91
ZNF548-212ENST00000602086 FRAS1Q86XX4 4008 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms