RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 CST9LQ9H4G1 147 aa17.54■□□□□ 0.4
ZNF558-206ENST00000599938 TINCRA0A1B0GVN0 87 aa17.53■□□□□ 0.4
ZNF558-206ENST00000599938 PMVKQ15126 192 aa17.53■□□□□ 0.4
ZNF558-206ENST00000599938 GAGE2EQ4V326 116 aa17.53■□□□□ 0.4
ZNF558-206ENST00000599938 URB1-AS1Q96HZ7 61 aa17.53■□□□□ 0.4
ZNF558-206ENST00000599938 GAGE2DQ9UEU5 116 aa17.53■□□□□ 0.4
ZNF558-206ENST00000599938 LINC00614P0C842 121 aa17.52■□□□□ 0.4
ZNF558-206ENST00000599938 C6orf226Q5I0X4 101 aa17.52■□□□□ 0.4
ZNF558-206ENST00000599938 YPEL4Q96NS1 127 aa17.52■□□□□ 0.4
ZNF558-206ENST00000599938 A0A096LNJ9 63 aa17.51■□□□□ 0.39
ZNF558-206ENST00000599938 NDUFC2-KCTD14E9PQ53 114 aa17.5■□□□□ 0.39
ZNF558-206ENST00000599938 HBDP02042 147 aa17.49■□□□□ 0.39
ZNF558-206ENST00000599938 IGLV5-45A0A087WSX0 123 aa17.48■□□□□ 0.39
ZNF558-206ENST00000599938 FAM168BA1KXE4 195 aa17.48■□□□□ 0.39
ZNF558-206ENST00000599938 SMIM1B2RUZ4 78 aa17.48■□□□□ 0.39
ZNF558-206ENST00000599938 RAB5BP61020 215 aa17.48■□□□□ 0.39
ZNF558-206ENST00000599938 PMCHL1Q16048 86 aa17.48■□□□□ 0.39
ZNF558-206ENST00000599938 PHF5AQ7RTV0 110 aaKnown RBP17.47■□□□□ 0.39
ZNF558-206ENST00000599938 CBLN2Q8IUK8 224 aa17.47■□□□□ 0.39
ZNF558-206ENST00000599938 FAM19A5Q7Z5A7 132 aaPredicted RBP17.46■□□□□ 0.39
ZNF558-206ENST00000599938 PDZD11Q5EBL8 140 aa17.45■□□□□ 0.38
ZNF558-206ENST00000599938 F8VRH5 84 aa17.44■□□□□ 0.38
ZNF558-206ENST00000599938 CXCL5P42830 114 aa17.44■□□□□ 0.38
ZNF558-206ENST00000599938 NDUFA6P56556 154 aa17.44■□□□□ 0.38
ZNF558-206ENST00000599938 SPINK8P0C7L1 97 aa17.43■□□□□ 0.38
ZNF558-206ENST00000599938 SLC7A5P1Q8MH63 180 aa17.42■□□□□ 0.38
ZNF558-206ENST00000599938 COX7B2Q8TF08 81 aa17.42■□□□□ 0.38
ZNF558-206ENST00000599938 PSORS1C2Q9UIG4 136 aa17.41■□□□□ 0.38
ZNF558-206ENST00000599938 H3BRM9 83 aa17.4■□□□□ 0.38
ZNF558-206ENST00000599938 IGLC3P0DOY3 106 aa17.4■□□□□ 0.38
ZNF558-206ENST00000599938 C9orf129Q5T035 196 aaKnown RBP17.4■□□□□ 0.38
ZNF558-206ENST00000599938 ATP5LO75964 103 aa17.39■□□□□ 0.37
ZNF558-206ENST00000599938 M0QXV9 152 aa17.38■□□□□ 0.37
ZNF558-206ENST00000599938 SPINK6Q6UWN8 80 aa17.38■□□□□ 0.37
ZNF558-206ENST00000599938 KRTAP7-1Q8IUC3 87 aa17.36■□□□□ 0.37
ZNF558-206ENST00000599938 CHCHD1Q96BP2 118 aaKnown RBP17.36■□□□□ 0.37
ZNF558-206ENST00000599938 MT1HL1P0DM35 61 aa17.35■□□□□ 0.37
ZNF558-206ENST00000599938 C1orf137Q5JT78 98 aa17.35■□□□□ 0.37
ZNF558-206ENST00000599938 XAGE1AQ9HD64 81 aa17.34■□□□□ 0.37
ZNF558-206ENST00000599938 ZNF22P17026 224 aaPredicted RBP17.33■□□□□ 0.36
ZNF558-206ENST00000599938 SRSF9Q13242 221 aaKnown RBP eCLIP17.33■□□□□ 0.36
ZNF558-206ENST00000599938 BAGE3Q86Y29 109 aa17.33■□□□□ 0.36
ZNF558-206ENST00000599938 UBE2BP63146 152 aa17.31■□□□□ 0.36
ZNF558-206ENST00000599938 TNXBP22105 4242 aa17.3■□□□□ 0.36
ZNF558-206ENST00000599938 REG3GQ6UW15 175 aa17.3■□□□□ 0.36
ZNF558-206ENST00000599938 KRTAP11-1Q8IUC1 163 aa17.3■□□□□ 0.36
ZNF558-206ENST00000599938 IGLV5-39A0A0G2JS06 123 aa17.29■□□□□ 0.36
ZNF558-206ENST00000599938 TRGC2P03986 189 aa17.29■□□□□ 0.36
ZNF558-206ENST00000599938 SERTAD4-AS1Q5TG53 156 aa17.29■□□□□ 0.36
ZNF558-206ENST00000599938 C11orf86A6NJI1 115 aa17.28■□□□□ 0.36
ZNF558-206ENST00000599938 HSBP1O75506 76 aa17.27■□□□□ 0.36
ZNF558-206ENST00000599938 TMEM170BQ5T4T1 132 aa17.26■□□□□ 0.35
ZNF558-206ENST00000599938 IFI27L1Q96BM0 104 aa17.26■□□□□ 0.35
ZNF558-206ENST00000599938 LINC01600Q96MT4 127 aa17.26■□□□□ 0.35
ZNF558-206ENST00000599938 CHTOPQ9Y3Y2 248 aaKnown RBP17.26■□□□□ 0.35
ZNF558-206ENST00000599938 IGLV7-43P04211 117 aa17.24■□□□□ 0.35
ZNF558-206ENST00000599938 C22orf24Q9Y442 160 aa17.23■□□□□ 0.35
ZNF558-206ENST00000599938 HMCN2Q8NDA2 5059 aa17.23■□□□□ 0.35
ZNF558-206ENST00000599938 FAM19A2Q8N3H0 131 aa17.22■□□□□ 0.35
ZNF558-206ENST00000599938 TRAV12-1A0A0B4J245 112 aa17.21■□□□□ 0.35
ZNF558-206ENST00000599938 LBHQ53QV2 105 aaPredicted RBP17.19■□□□□ 0.34
ZNF558-206ENST00000599938 COLCA2A8K830 154 aa17.17■□□□□ 0.34
ZNF558-206ENST00000599938 SERF1AO75920 110 aa17.17■□□□□ 0.34
ZNF558-206ENST00000599938 DIRC1Q969H9 104 aa17.17■□□□□ 0.34
ZNF558-206ENST00000599938 TP73-AS1Q9UF72 201 aa17.17■□□□□ 0.34
ZNF558-206ENST00000599938 PFN2P35080 140 aa17.16■□□□□ 0.34
ZNF558-206ENST00000599938 MRPL55Q7Z7F7 128 aaKnown RBP17.16■□□□□ 0.34
ZNF558-206ENST00000599938 LINC00310P59036 64 aa17.15■□□□□ 0.34
ZNF558-206ENST00000599938 ODF1Q14990 250 aa17.15■□□□□ 0.34
ZNF558-206ENST00000599938 SFTA2Q6UW10 78 aa17.14■□□□□ 0.33
ZNF558-206ENST00000599938 ERG28Q9UKR5 140 aa17.14■□□□□ 0.33
ZNF558-206ENST00000599938 PLA2G2DQ9UNK4 145 aa17.13■□□□□ 0.33
ZNF558-206ENST00000599938 TMEM223A0PJW6 202 aa17.12■□□□□ 0.33
ZNF558-206ENST00000599938 ZNF625Q96I27 306 aaPredicted RBP17.12■□□□□ 0.33
ZNF558-206ENST00000599938 H0Y8G0 127 aa17.11■□□□□ 0.33
ZNF558-206ENST00000599938 H0Y9J4 135 aa17.11■□□□□ 0.33
ZNF558-206ENST00000599938 LEPROTL1O95214 131 aa17.11■□□□□ 0.33
ZNF558-206ENST00000599938 NUPR1O60356 82 aa17.1■□□□□ 0.33
ZNF558-206ENST00000599938 COX17Q14061 63 aa17.09■□□□□ 0.33
ZNF558-206ENST00000599938 NKAPP1Q8N9T2 125 aa17.09■□□□□ 0.33
ZNF558-206ENST00000599938 KRTAP10-8P60410 259 aa17.08■□□□□ 0.32
ZNF558-206ENST00000599938 IGLV5-37A0A075B6J1 123 aa17.07■□□□□ 0.32
ZNF558-206ENST00000599938 LINC00167Q96N53 147 aa17.07■□□□□ 0.32
ZNF558-206ENST00000599938 SND1-IT1Q9HBX3 110 aa17.07■□□□□ 0.32
ZNF558-206ENST00000599938 GAGE10A6NGK3 116 aa17.06■□□□□ 0.32
ZNF558-206ENST00000599938 HSPB8Q9UJY1 196 aa17.06■□□□□ 0.32
ZNF558-206ENST00000599938 RPL37AP8A6NKH3 93 aa17.05■□□□□ 0.32
ZNF558-206ENST00000599938 SCO1O75880 301 aa17.05■□□□□ 0.32
ZNF558-206ENST00000599938 FABP4P15090 132 aa17.02■□□□□ 0.32
ZNF558-206ENST00000599938 ZNF861PO60384 105 aa17.01■□□□□ 0.31
ZNF558-206ENST00000599938 BCE1O60756 84 aa17■□□□□ 0.31
ZNF558-206ENST00000599938 VPREB1P12018 145 aa16.99■□□□□ 0.31
ZNF558-206ENST00000599938 LINC00158P58513 81 aa16.99■□□□□ 0.31
ZNF558-206ENST00000599938 PLNP26678 52 aa16.98■□□□□ 0.31
ZNF558-206ENST00000599938 RPL24P83731 157 aaKnown RBP16.97■□□□□ 0.31
ZNF558-206ENST00000599938 A0A0U1RRA0 63 aa16.96■□□□□ 0.31
ZNF558-206ENST00000599938 PRR26Q8N8Z3 221 aa16.96■□□□□ 0.31
ZNF558-206ENST00000599938 IGKV2-28A0A075B6P5 120 aa16.95■□□□□ 0.3
ZNF558-206ENST00000599938 IGKV2D-28P01615 120 aa16.95■□□□□ 0.3
ZNF558-206ENST00000599938 KRTAP1-4P0C5Y4 121 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms