RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 EP400Q96L91 3159 aa8.5□□□□□ -1.05
SCN8A-208ENST00000599343 MUC7Q8TAX7 377 aa8.5□□□□□ -1.05
SCN8A-208ENST00000599343 TRBV7-7A0A0K0K1E9 115 aa8.5□□□□□ -1.05
SCN8A-208ENST00000599343 LINC00575Q6W349 94 aa8.5□□□□□ -1.05
SCN8A-208ENST00000599343 AVPP01185 164 aa8.5□□□□□ -1.05
SCN8A-208ENST00000599343 PCDH15Q96QU1 1955 aa8.5□□□□□ -1.05
SCN8A-208ENST00000599343 HCFC1P51610 2035 aa8.5□□□□□ -1.05
SCN8A-208ENST00000599343 BRI3O95415 125 aa8.5□□□□□ -1.05
SCN8A-208ENST00000599343 SMR3AQ99954 134 aa8.49□□□□□ -1.05
SCN8A-208ENST00000599343 Q9BRP9 147 aa8.49□□□□□ -1.05
SCN8A-208ENST00000599343 CDSNQ15517 529 aa8.48□□□□□ -1.05
SCN8A-208ENST00000599343 H0Y9P7 68 aa8.48□□□□□ -1.05
SCN8A-208ENST00000599343 LINC01556Q5JQF7 62 aa8.47□□□□□ -1.05
SCN8A-208ENST00000599343 A0A087WSZ3 146 aa8.47□□□□□ -1.05
SCN8A-208ENST00000599343 A8MTW9 85 aa8.47□□□□□ -1.05
SCN8A-208ENST00000599343 FHL2Q14192 279 aa8.47□□□□□ -1.05
SCN8A-208ENST00000599343 CRYGAP11844 174 aa8.46□□□□□ -1.05
SCN8A-208ENST00000599343 IGLV5-52A0A0A0MRZ9 124 aa8.46□□□□□ -1.06
SCN8A-208ENST00000599343 NUPR2A6NF83 97 aa8.46□□□□□ -1.06
SCN8A-208ENST00000599343 Q6ZSN1 163 aa8.46□□□□□ -1.06
SCN8A-208ENST00000599343 SBSPONQ8IVN8 264 aa8.45□□□□□ -1.06
SCN8A-208ENST00000599343 Q6ZTC4 211 aa8.45□□□□□ -1.06
SCN8A-208ENST00000599343 PIEZO2Q9H5I5 2752 aa8.44□□□□□ -1.06
SCN8A-208ENST00000599343 AMELXQ99217 191 aa8.44□□□□□ -1.06
SCN8A-208ENST00000599343 PIEZO1Q92508 2521 aa8.43□□□□□ -1.06
SCN8A-208ENST00000599343 HCG22E2RYF7 251 aa8.42□□□□□ -1.06
SCN8A-208ENST00000599343 Q9UF83 564 aa8.42□□□□□ -1.06
SCN8A-208ENST00000599343 ATG2AQ2TAZ0 1938 aa8.42□□□□□ -1.06
SCN8A-208ENST00000599343 NCOR2Q9Y618 2525 aa8.42□□□□□ -1.06
SCN8A-208ENST00000599343 LINC00846Q9NV44 126 aa8.42□□□□□ -1.06
SCN8A-208ENST00000599343 A0A096LNJ9 63 aa8.41□□□□□ -1.06
SCN8A-208ENST00000599343 LTBP2Q14767 1821 aa8.41□□□□□ -1.06
SCN8A-208ENST00000599343 GOLGB1Q14789 3259 aaKnown RBP8.41□□□□□ -1.06
SCN8A-208ENST00000599343 TMEM254Q8TBM7 123 aa8.41□□□□□ -1.06
SCN8A-208ENST00000599343 IGLV1-51P01701 117 aa8.41□□□□□ -1.06
SCN8A-208ENST00000599343 PLA2G2AP14555 144 aa8.41□□□□□ -1.06
SCN8A-208ENST00000599343 EML5Q05BV3 1969 aa8.4□□□□□ -1.06
SCN8A-208ENST00000599343 KRTAP10-9P60411 292 aa8.4□□□□□ -1.07
SCN8A-208ENST00000599343 PRLHP81277 87 aa8.39□□□□□ -1.07
SCN8A-208ENST00000599343 IGF2RP11717 2491 aa8.39□□□□□ -1.07
SCN8A-208ENST00000599343 PRRC2AP48634 2157 aaKnown RBP8.39□□□□□ -1.07
SCN8A-208ENST00000599343 CSDC2Q9Y534 153 aaKnown RBP8.38□□□□□ -1.07
SCN8A-208ENST00000599343 Q6ZRU5 148 aa8.37□□□□□ -1.07
SCN8A-208ENST00000599343 LYPD5Q6UWN5 251 aa8.36□□□□□ -1.07
SCN8A-208ENST00000599343 LINC00337Q8N6G1 96 aa8.36□□□□□ -1.07
SCN8A-208ENST00000599343 COL4A4P53420 1690 aaPredicted RBP8.36□□□□□ -1.07
SCN8A-208ENST00000599343 C1orf64Q8NEQ6 169 aa8.36□□□□□ -1.07
SCN8A-208ENST00000599343 C2orf48Q96LS8 159 aa8.36□□□□□ -1.07
SCN8A-208ENST00000599343 TLN1Q9Y490 2541 aaKnown RBP8.35□□□□□ -1.07
SCN8A-208ENST00000599343 SMIM29Q86T20 159 aa8.35□□□□□ -1.07
SCN8A-208ENST00000599343 IGKV2D-30A0A075B6S6 120 aa8.35□□□□□ -1.07
SCN8A-208ENST00000599343 IGKV2-30P06310 120 aa8.35□□□□□ -1.07
SCN8A-208ENST00000599343 EXPH5Q8NEV8 1989 aa8.34□□□□□ -1.07
SCN8A-208ENST00000599343 RAI1Q7Z5J4 1906 aaPredicted RBP8.33□□□□□ -1.08
SCN8A-208ENST00000599343 CEP192Q8TEP8 1941 aa8.33□□□□□ -1.08
SCN8A-208ENST00000599343 A0A1B0GUV1 79 aa8.33□□□□□ -1.08
SCN8A-208ENST00000599343 SMCR5Q8TEV8 140 aa8.33□□□□□ -1.08
SCN8A-208ENST00000599343 hDV103S1A0JD37 113 aa8.33□□□□□ -1.08
SCN8A-208ENST00000599343 CDIP1Q9H305 208 aa8.32□□□□□ -1.08
SCN8A-208ENST00000599343 C7orf65Q6ZTY9 151 aa8.32□□□□□ -1.08
SCN8A-208ENST00000599343 COX8CQ7Z4L0 72 aa8.32□□□□□ -1.08
SCN8A-208ENST00000599343 C22orf24Q9Y442 160 aa8.32□□□□□ -1.08
SCN8A-208ENST00000599343 KIAA0087Q14695 138 aa8.32□□□□□ -1.08
SCN8A-208ENST00000599343 C1orf134Q5TEV5 83 aa8.32□□□□□ -1.08
SCN8A-208ENST00000599343 F8WDY8 70 aa8.3□□□□□ -1.08
SCN8A-208ENST00000599343 CXCL6P80162 114 aa8.3□□□□□ -1.08
SCN8A-208ENST00000599343 PRO3102Q9H379 93 aa8.29□□□□□ -1.08
SCN8A-208ENST00000599343 SPATA3Q8NHX4 192 aa8.29□□□□□ -1.08
SCN8A-208ENST00000599343 JMJD1CQ15652 2540 aa8.29□□□□□ -1.08
SCN8A-208ENST00000599343 A0A1W2PPR1 153 aa8.28□□□□□ -1.08
SCN8A-208ENST00000599343 C16orf95Q9H693 158 aa8.28□□□□□ -1.08
SCN8A-208ENST00000599343 LIMD2Q9BT23 127 aa8.28□□□□□ -1.08
SCN8A-208ENST00000599343 A0A1B0GU69 56 aa8.28□□□□□ -1.08
SCN8A-208ENST00000599343 LINC01561Q8N1V8 128 aa8.28□□□□□ -1.08
SCN8A-208ENST00000599343 C10orf142B7Z368 130 aa8.27□□□□□ -1.09
SCN8A-208ENST00000599343 FSHBP01225 129 aa8.26□□□□□ -1.09
SCN8A-208ENST00000599343 MUC22E2RYF6 1773 aaPredicted RBP8.26□□□□□ -1.09
SCN8A-208ENST00000599343 TLN2Q9Y4G6 2542 aa8.26□□□□□ -1.09
SCN8A-208ENST00000599343 AGRNO00468 2067 aa8.26□□□□□ -1.09
SCN8A-208ENST00000599343 Q8N2B8 174 aa8.26□□□□□ -1.09
SCN8A-208ENST00000599343 USP9XQ93008 2570 aaPredicted RBP8.25□□□□□ -1.09
SCN8A-208ENST00000599343 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
SCN8A-208ENST00000599343 WDR87Q6ZQQ6 2873 aa8.25□□□□□ -1.09
SCN8A-208ENST00000599343 ABCA12Q86UK0 2595 aa8.25□□□□□ -1.09
SCN8A-208ENST00000599343 C4orf26Q17RF5 130 aa8.25□□□□□ -1.09
SCN8A-208ENST00000599343 KIF25-AS1Q9Y6Z4 181 aa8.24□□□□□ -1.09
SCN8A-208ENST00000599343 MOBPQ13875 183 aa8.24□□□□□ -1.09
SCN8A-208ENST00000599343 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
SCN8A-208ENST00000599343 IGLV5-39A0A0G2JS06 123 aa8.23□□□□□ -1.09
SCN8A-208ENST00000599343 PRO0628Q9UI54 55 aa8.23□□□□□ -1.09
SCN8A-208ENST00000599343 ZFYVE26Q68DK2 2539 aa8.23□□□□□ -1.09
SCN8A-208ENST00000599343 SETD2Q9BYW2 2564 aaPredicted RBP8.22□□□□□ -1.09
SCN8A-208ENST00000599343 FAM218AQ96MZ4 157 aa8.22□□□□□ -1.09
SCN8A-208ENST00000599343 SMCPP49901 116 aaPredicted RBP8.22□□□□□ -1.09
SCN8A-208ENST00000599343 C11orf72Q8NBR9 251 aa8.22□□□□□ -1.09
SCN8A-208ENST00000599343 PTPRSQ13332 1948 aa8.22□□□□□ -1.09
SCN8A-208ENST00000599343 LINC00167Q96N53 147 aa8.22□□□□□ -1.09
SCN8A-208ENST00000599343 SERTAD4-AS1Q5TG53 156 aa8.21□□□□□ -1.1
SCN8A-208ENST00000599343 CPAMD8Q8IZJ3 1885 aa8.21□□□□□ -1.1
SCN8A-208ENST00000599343 C6orf48Q9UBA6 75 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms