RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	ITPR3	Q14573	2671 aa		-1.13	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	TRBV7-4	A0A0J9YYF1	115 aa		-1.13	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	ATP5E	P56381	51 aa	Predicted RBP	-1.13	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	GNG11	P61952	73 aa		-1.13	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	UBA52	P62987	128 aa	Known RBP	-1.13	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	EHBP1L1	Q8N3D4	1523 aa		-1.14	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	LINC00959	A0A1B0GUT2	108 aa		-1.15	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	FAM24A	A6NFZ4	105 aa		-1.15	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	KRTAP20-1	Q3LI63	56 aa		-1.15	□□□□□ -2.59
SOX2-OT-231	ENST00000599082	LOC730098	B7Z3J9	87 aa		-1.16	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	SCN7A	Q01118	1682 aa		-1.16	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	FXYD6	Q9H0Q3	95 aa		-1.17	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	SCAPER	Q9BY12	1400 aa		-1.17	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	MANBAL	Q9NQG1	85 aa		-1.18	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	IER3IP1	Q9Y5U9	82 aa		-1.18	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	DLEU1	O43261	78 aa		-1.19	□□□□□ -2.6
SOX2-OT-231	ENST00000599082		Q0VG73	95 aa		-1.19	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	LINC01600	Q96MT4	127 aa		-1.19	□□□□□ -2.6
SOX2-OT-231	ENST00000599082		A0A1B0GV90	55 aa		-1.2	□□□□□ -2.6
SOX2-OT-231	ENST00000599082		F6UZH7	168 aa		-1.2	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	SPINK4	O60575	86 aa		-1.2	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	FDCSP	Q8NFU4	85 aa		-1.2	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	FLG	P20930	4061 aa	Predicted RBP	-1.21	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	CNOT1	A5YKK6	2376 aa	Known RBP	-1.21	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	EFCAB10	A6NFE3	127 aa		-1.21	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	UBE2D3	P61077	147 aa		-1.21	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	UBE2D2	P62837	147 aa		-1.21	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	KIAA0556	O60303	1618 aa		-1.22	□□□□□ -2.6
SOX2-OT-231	ENST00000599082	DIP2C	Q9Y2E4	1556 aa		-1.22	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	FASN	P49327	2511 aa	Known RBP	-1.23	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	MXRA5	Q9NR99	2828 aa		-1.23	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	SFTA2	Q6UW10	78 aa		-1.23	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	ADGRL2	O95490	1459 aa		-1.24	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	GNG4	P50150	75 aa		-1.24	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	LCN9	Q8WX39	176 aa		-1.24	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	PRO1933	Q9H354	126 aa		-1.24	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	MYO18B	Q8IUG5	2567 aa		-1.24	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	C1orf167	Q5SNV9	1468 aa		-1.24	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	NUP188	Q5SRE5	1749 aa		-1.25	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	COX6C	P09669	75 aa		-1.25	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	SVBP	Q8N300	66 aa		-1.25	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	DEFB105A	Q8NG35	78 aa		-1.25	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	SETBP1	Q9Y6X0	1596 aa		-1.25	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	TOP2B	Q02880	1626 aa		-1.26	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	RIF1	Q5UIP0	2472 aa	Known RBP	-1.26	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	TRAPPC2	P0DI81	140 aa		-1.26	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	TRAPPC2B	P0DI82	140 aa		-1.26	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	KLK9	Q2XQG4	91 aa		-1.26	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	PRO1854	Q9UHT4	67 aa		-1.26	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	TNRC18	O15417	2968 aa	Predicted RBP	-1.26	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	PRRC2C	Q9Y520	2896 aa	Known RBP	-1.27	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	FAM223B	A6NKX1	122 aa		-1.27	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	PPP3R1	P63098	170 aa		-1.27	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	NRK	Q7Z2Y5	1582 aa		-1.28	□□□□□ -2.61
SOX2-OT-231	ENST00000599082		A0A1B0GWA3	101 aa		-1.28	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	NAP1L6	A6NFF2	107 aa		-1.28	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	CORT	O00230	105 aa		-1.28	□□□□□ -2.61
SOX2-OT-231	ENST00000599082	XRN1	Q8IZH2	1706 aa	Known RBP	-1.29	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	MRC2	Q9UBG0	1479 aa		-1.3	□□□□□ -2.62
SOX2-OT-231	ENST00000599082		A0A0G2JMZ2	1700 aa		-1.3	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	FMN2	Q9NZ56	1722 aa		-1.31	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	NBPF19	A0A087WUL8	3843 aa		-1.31	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	SYS1-DBNDD2	H3BUS1	97 aa		-1.31	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	PKHD1	P08F94	4074 aa		-1.31	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	EIF4G3	O43432	1585 aa	Known RBP	-1.31	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	ITPR2	Q14571	2701 aa		-1.32	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	USMG5	Q96IX5	58 aa		-1.32	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	C12orf57	Q99622	126 aa		-1.32	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	ARHGAP5	Q13017	1502 aa		-1.32	□□□□□ -2.62
SOX2-OT-231	ENST00000599082		M0R2T5	61 aa		-1.33	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	COX8A	P10176	69 aa		-1.33	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	SPHKAP	Q2M3C7	1700 aa		-1.34	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	MGAM2	Q2M2H8	2515 aa		-1.34	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	IQSEC2	Q5JU85	1478 aa		-1.34	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	S100A1	P23297	94 aa		-1.34	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	AKAP13	Q12802	2813 aa		-1.34	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	MAPKBP1	O60336	1514 aa		-1.35	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	PDCD11	Q14690	1871 aa	Known RBP	-1.35	□□□□□ -2.62
SOX2-OT-231	ENST00000599082	ANKRD11	Q6UB99	2663 aa	Predicted RBP	-1.35	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	SAA2	P0DJI9	122 aa	Predicted RBP	-1.35	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	SVEP1	Q4LDE5	3571 aa		-1.36	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	PZP	P20742	1482 aa		-1.36	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	CC2D2A	Q9P2K1	1620 aa		-1.36	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	GCN1	Q92616	2671 aa	Known RBP	-1.36	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	MUC17	Q685J3	4493 aa		-1.36	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	LAMA1	P25391	3075 aa		-1.36	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	LINC00846	Q9NV44	126 aa		-1.36	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	DNAH3	Q8TD57	4116 aa		-1.36	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	ITPR1	Q14643	2758 aa		-1.36	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	CRYM-AS1	A6NIL9	109 aa		-1.37	□□□□□ -2.63
SOX2-OT-231	ENST00000599082		H3BQ15	152 aa		-1.37	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	PLEKHH2	Q8IVE3	1493 aa		-1.37	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	NLRP1	Q9C000	1473 aa		-1.37	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	DNAH2	Q9P225	4427 aa		-1.37	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	C2orf88	Q9BSF0	95 aa		-1.38	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	CHD1	O14646	1710 aa		-1.38	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	DNAH6	Q9C0G6	4158 aa		-1.39	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	SNCA	P37840	140 aa		-1.39	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	SEC11A	P67812	179 aa		-1.39	□□□□□ -2.63
SOX2-OT-231	ENST00000599082	GNG8	Q9UK08	70 aa		-1.39	□□□□□ -2.63

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms