RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 H0Y8G0 127 aa8.98□□□□□ -0.97
SHKBP1-218ENST00000598907 XCL1P47992 114 aa8.98□□□□□ -0.97
SHKBP1-218ENST00000598907 HERVK_113P63121 156 aa8.98□□□□□ -0.97
SHKBP1-218ENST00000598907 OR10D4PQ8NGN7 298 aa8.98□□□□□ -0.97
SHKBP1-218ENST00000598907 TM2D2Q9BX73 214 aa8.98□□□□□ -0.97
SHKBP1-218ENST00000598907 C11orf86A6NJI1 115 aa8.96□□□□□ -0.98
SHKBP1-218ENST00000598907 LINC01561Q8N1V8 128 aa8.96□□□□□ -0.98
SHKBP1-218ENST00000598907 A0A087WZ39 114 aa8.95□□□□□ -0.98
SHKBP1-218ENST00000598907 ZNF22P17026 224 aaPredicted RBP8.95□□□□□ -0.98
SHKBP1-218ENST00000598907 PMCHL2Q9BQD1 86 aa8.95□□□□□ -0.98
SHKBP1-218ENST00000598907 GEMIN7Q9H840 131 aaKnown RBP8.95□□□□□ -0.98
SHKBP1-218ENST00000598907 CDKN2A-AS1Q9UH64 79 aa8.95□□□□□ -0.98
SHKBP1-218ENST00000598907 DPM2O94777 84 aa8.94□□□□□ -0.98
SHKBP1-218ENST00000598907 PLNP26678 52 aa8.94□□□□□ -0.98
SHKBP1-218ENST00000598907 COX7A2LO14548 114 aa8.93□□□□□ -0.98
SHKBP1-218ENST00000598907 IGKCP01834 107 aa8.93□□□□□ -0.98
SHKBP1-218ENST00000598907 C5orf38Q86SI9 138 aa8.93□□□□□ -0.98
SHKBP1-218ENST00000598907 C20orf202A1L168 122 aa8.92□□□□□ -0.98
SHKBP1-218ENST00000598907 Q6ZRU5 148 aa8.92□□□□□ -0.98
SHKBP1-218ENST00000598907 LINC00469Q8N7U9 141 aa8.92□□□□□ -0.98
SHKBP1-218ENST00000598907 LOC105371267A0A1B0GV96 52 aa8.91□□□□□ -0.98
SHKBP1-218ENST00000598907 AKR1D1P51857 326 aa8.91□□□□□ -0.98
SHKBP1-218ENST00000598907 JOSD1Q15040 202 aaPredicted RBP8.91□□□□□ -0.98
SHKBP1-218ENST00000598907 C15orf56Q8N910 161 aa8.91□□□□□ -0.98
SHKBP1-218ENST00000598907 IGHV3-64A0A075B6Q5 118 aa8.9□□□□□ -0.98
SHKBP1-218ENST00000598907 IGHV1-58A0A0C4DH39 117 aa8.9□□□□□ -0.98
SHKBP1-218ENST00000598907 TMEM223A0PJW6 202 aa8.9□□□□□ -0.98
SHKBP1-218ENST00000598907 SMIM1B2RUZ4 78 aa8.9□□□□□ -0.98
SHKBP1-218ENST00000598907 H3BRM9 83 aa8.9□□□□□ -0.98
SHKBP1-218ENST00000598907 TMEM170BQ5T4T1 132 aa8.9□□□□□ -0.98
SHKBP1-218ENST00000598907 IGLV5-39A0A0G2JS06 123 aa8.89□□□□□ -0.99
SHKBP1-218ENST00000598907 USP17L23D6RBM5 183 aa8.89□□□□□ -0.99
SHKBP1-218ENST00000598907 APOMO95445 188 aa8.88□□□□□ -0.99
SHKBP1-218ENST00000598907 SCGB1D1O95968 90 aa8.88□□□□□ -0.99
SHKBP1-218ENST00000598907 SPINK8P0C7L1 97 aa8.88□□□□□ -0.99
SHKBP1-218ENST00000598907 MALP21145 153 aa8.88□□□□□ -0.99
SHKBP1-218ENST00000598907 CFAP161Q6P656 301 aa8.88□□□□□ -0.99
SHKBP1-218ENST00000598907 LPAP08519 4548 aa8.88□□□□□ -0.99
SHKBP1-218ENST00000598907 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
SHKBP1-218ENST00000598907 KIAA0087Q14695 138 aa8.87□□□□□ -0.99
SHKBP1-218ENST00000598907 PYY3Q5JQD4 70 aa8.87□□□□□ -0.99
SHKBP1-218ENST00000598907 ATOH7Q8N100 152 aa8.86□□□□□ -0.99
SHKBP1-218ENST00000598907 ORAOV1Q8WV07 137 aa8.86□□□□□ -0.99
SHKBP1-218ENST00000598907 Q8IZM0 81 aa8.85□□□□□ -0.99
SHKBP1-218ENST00000598907 STPG4Q8N801 248 aa8.85□□□□□ -0.99
SHKBP1-218ENST00000598907 E9PLD3 99 aa8.84□□□□□ -0.99
SHKBP1-218ENST00000598907 C14orf177Q52M58 125 aa8.84□□□□□ -0.99
SHKBP1-218ENST00000598907 hDV102S1A0JD36 115 aa8.83□□□□□ -1
SHKBP1-218ENST00000598907 LEPROTO15243 131 aa8.83□□□□□ -1
SHKBP1-218ENST00000598907 HERVK_113P61574 105 aa8.83□□□□□ -1
SHKBP1-218ENST00000598907 SPAG11BQ08648 103 aa8.83□□□□□ -1
SHKBP1-218ENST00000598907 HIGD2BQ4VC39 106 aa8.83□□□□□ -1
SHKBP1-218ENST00000598907 COX7B2Q8TF08 81 aa8.83□□□□□ -1
SHKBP1-218ENST00000598907 C2orf48Q96LS8 159 aa8.83□□□□□ -1
SHKBP1-218ENST00000598907 MUC2Q02817 5179 aa8.83□□□□□ -1
SHKBP1-218ENST00000598907 F8WDY8 70 aa8.82□□□□□ -1
SHKBP1-218ENST00000598907 ZNF561-AS1K7EIQ3 104 aa8.82□□□□□ -1
SHKBP1-218ENST00000598907 SLPIP03973 132 aa8.82□□□□□ -1
SHKBP1-218ENST00000598907 MAJINQ3KP22 176 aa8.82□□□□□ -1
SHKBP1-218ENST00000598907 ANKRD39Q53RE8 183 aa8.82□□□□□ -1
SHKBP1-218ENST00000598907 IGKV2D-26A0A0A0MRZ7 120 aa8.81□□□□□ -1
SHKBP1-218ENST00000598907 TSPEAR-AS2P59090 65 aa8.81□□□□□ -1
SHKBP1-218ENST00000598907 PLEKHB2Q96CS7 222 aa8.81□□□□□ -1
SHKBP1-218ENST00000598907 LINC00526Q96FQ7 95 aa8.81□□□□□ -1
SHKBP1-218ENST00000598907 TOMM7Q9P0U1 55 aa8.81□□□□□ -1
SHKBP1-218ENST00000598907 PRSS2P07478 247 aa8.8□□□□□ -1
SHKBP1-218ENST00000598907 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
SHKBP1-218ENST00000598907 C6orf226Q5I0X4 101 aa8.8□□□□□ -1
SHKBP1-218ENST00000598907 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
SHKBP1-218ENST00000598907 J3QQQ9 107 aa8.79□□□□□ -1
SHKBP1-218ENST00000598907 CXCL5P42830 114 aa8.79□□□□□ -1
SHKBP1-218ENST00000598907 ZNF625Q96I27 306 aaPredicted RBP8.79□□□□□ -1
SHKBP1-218ENST00000598907 HSBP1L1C9JCN9 74 aa8.78□□□□□ -1
SHKBP1-218ENST00000598907 PANO1I0J062 215 aa8.78□□□□□ -1
SHKBP1-218ENST00000598907 C2orf82Q6UX34 121 aa8.78□□□□□ -1
SHKBP1-218ENST00000598907 UNQ6190/PRO20217Q6UXQ8 127 aa8.78□□□□□ -1
SHKBP1-218ENST00000598907 LINC01600Q96MT4 127 aa8.78□□□□□ -1
SHKBP1-218ENST00000598907 NDUFA1O15239 70 aa8.77□□□□□ -1.01
SHKBP1-218ENST00000598907 SMIM6P0DI80 62 aa8.77□□□□□ -1.01
SHKBP1-218ENST00000598907 CKS1BP61024 79 aa8.77□□□□□ -1.01
SHKBP1-218ENST00000598907 SYCNQ0VAF6 134 aa8.77□□□□□ -1.01
SHKBP1-218ENST00000598907 RNF151Q2KHN1 245 aa8.77□□□□□ -1.01
SHKBP1-218ENST00000598907 C10orf25Q5T742 122 aa8.77□□□□□ -1.01
SHKBP1-218ENST00000598907 CAMK2N2Q96S95 79 aa8.77□□□□□ -1.01
SHKBP1-218ENST00000598907 LGALS3P17931 250 aaKnown RBP8.76□□□□□ -1.01
SHKBP1-218ENST00000598907 NMUP48645 174 aa8.76□□□□□ -1.01
SHKBP1-218ENST00000598907 SFTA2Q6UW10 78 aa8.76□□□□□ -1.01
SHKBP1-218ENST00000598907 VAMP8Q9BV40 100 aa8.76□□□□□ -1.01
SHKBP1-218ENST00000598907 TRBV30A0A0K0K1B3 111 aa8.75□□□□□ -1.01
SHKBP1-218ENST00000598907 A0A0U1RQV1 116 aa8.75□□□□□ -1.01
SHKBP1-218ENST00000598907 C9orf163Q8N9P6 203 aa8.75□□□□□ -1.01
SHKBP1-218ENST00000598907 CARD19Q96LW7 228 aa8.75□□□□□ -1.01
SHKBP1-218ENST00000598907 C6orf48Q9UBA6 75 aa8.75□□□□□ -1.01
SHKBP1-218ENST00000598907 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
SHKBP1-218ENST00000598907 MYMXA0A1B0GTQ4 84 aa8.74□□□□□ -1.01
SHKBP1-218ENST00000598907 SPATA45Q537H7 98 aa8.74□□□□□ -1.01
SHKBP1-218ENST00000598907 PCP2Q8IVA1 136 aa8.74□□□□□ -1.01
SHKBP1-218ENST00000598907 TTTY13Q9BZ97 58 aa8.74□□□□□ -1.01
SHKBP1-218ENST00000598907 PAM16Q9Y3D7 125 aa8.74□□□□□ -1.01
SHKBP1-218ENST00000598907 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms