RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 LELP1Q5T871 98 aa8.18□□□□□ -1.1
ZNF548-209ENST00000598895 SPANXDQ9BXN6 97 aa8.18□□□□□ -1.1
ZNF548-209ENST00000598895 SPANXCQ9NY87 97 aa8.18□□□□□ -1.1
ZNF548-209ENST00000598895 IGHV3-38A0A0C4DH36 116 aa8.17□□□□□ -1.1
ZNF548-209ENST00000598895 IGHV1-58A0A0C4DH39 117 aa8.17□□□□□ -1.1
ZNF548-209ENST00000598895 A0A0J9YXV3 536 aa8.17□□□□□ -1.1
ZNF548-209ENST00000598895 A0A0J9YXY3 114 aa8.17□□□□□ -1.1
ZNF548-209ENST00000598895 DNAH10OSP0CZ25 163 aa8.17□□□□□ -1.1
ZNF548-209ENST00000598895 TIRAPP58753 221 aa8.17□□□□□ -1.1
ZNF548-209ENST00000598895 RPL36AP83881 106 aaKnown RBP8.17□□□□□ -1.1
ZNF548-209ENST00000598895 MUSTN1Q8IVN3 82 aa8.17□□□□□ -1.1
ZNF548-209ENST00000598895 Q8N3U1 123 aa8.17□□□□□ -1.1
ZNF548-209ENST00000598895 RPL36ALQ969Q0 106 aaKnown RBP8.17□□□□□ -1.1
ZNF548-209ENST00000598895 LINC01600Q96MT4 127 aa8.17□□□□□ -1.1
ZNF548-209ENST00000598895 TIMM17BO60830 172 aa8.16□□□□□ -1.1
ZNF548-209ENST00000598895 Q1RN00 199 aa8.16□□□□□ -1.1
ZNF548-209ENST00000598895 OPRPNQ99935 248 aaPredicted RBP8.16□□□□□ -1.1
ZNF548-209ENST00000598895 TRBV10-1A0A0K0K1A3 114 aa8.15□□□□□ -1.1
ZNF548-209ENST00000598895 TRBV30A0A0K0K1B3 111 aa8.15□□□□□ -1.1
ZNF548-209ENST00000598895 SLC25A20O43772 301 aa8.15□□□□□ -1.1
ZNF548-209ENST00000598895 COX6CP09669 75 aa8.15□□□□□ -1.1
ZNF548-209ENST00000598895 IFITM1P13164 125 aa8.15□□□□□ -1.1
ZNF548-209ENST00000598895 COPS9Q8WXC6 57 aa8.15□□□□□ -1.1
ZNF548-209ENST00000598895 DNAH17Q9UFH2 4485 aa8.15□□□□□ -1.11
ZNF548-209ENST00000598895 LINC01556Q5JQF7 62 aa8.14□□□□□ -1.11
ZNF548-209ENST00000598895 SFTA2Q6UW10 78 aa8.14□□□□□ -1.11
ZNF548-209ENST00000598895 Q6ZRN7 208 aaPredicted RBP8.14□□□□□ -1.11
ZNF548-209ENST00000598895 DEFB104AQ8WTQ1 72 aa8.14□□□□□ -1.11
ZNF548-209ENST00000598895 GEMIN7Q9H840 131 aaKnown RBP8.14□□□□□ -1.11
ZNF548-209ENST00000598895 Q9HAA7 133 aa8.14□□□□□ -1.11
ZNF548-209ENST00000598895 NDUFA12Q9UI09 145 aa8.14□□□□□ -1.11
ZNF548-209ENST00000598895 FAT2Q9NYQ8 4349 aa8.13□□□□□ -1.11
ZNF548-209ENST00000598895 C9JAW5 83 aa8.13□□□□□ -1.11
ZNF548-209ENST00000598895 SPINK8P0C7L1 97 aa8.13□□□□□ -1.11
ZNF548-209ENST00000598895 MIAQ16674 131 aa8.13□□□□□ -1.11
ZNF548-209ENST00000598895 ANKRD29Q8N6D5 301 aa8.13□□□□□ -1.11
ZNF548-209ENST00000598895 CARD19Q96LW7 228 aa8.13□□□□□ -1.11
ZNF548-209ENST00000598895 CDIP1Q9H305 208 aa8.13□□□□□ -1.11
ZNF548-209ENST00000598895 UBE2D4Q9Y2X8 147 aa8.13□□□□□ -1.11
ZNF548-209ENST00000598895 IGHV3-64A0A075B6Q5 118 aa8.12□□□□□ -1.11
ZNF548-209ENST00000598895 CKS1BP61024 79 aa8.12□□□□□ -1.11
ZNF548-209ENST00000598895 CIRBPQ14011 172 aaKnown RBP8.12□□□□□ -1.11
ZNF548-209ENST00000598895 LINC01620Q4KN68 170 aa8.12□□□□□ -1.11
ZNF548-209ENST00000598895 Q6ZUT4 128 aa8.12□□□□□ -1.11
ZNF548-209ENST00000598895 DAZ4Q86SG3 579 aaKnown RBP8.12□□□□□ -1.11
ZNF548-209ENST00000598895 CHCHD7Q9BUK0 85 aa8.12□□□□□ -1.11
ZNF548-209ENST00000598895 DAZ3Q9NR90 486 aaKnown RBP8.12□□□□□ -1.11
ZNF548-209ENST00000598895 TRBV10-2A0A0K0K1G8 114 aa8.11□□□□□ -1.11
ZNF548-209ENST00000598895 FUSP35637 526 aaKnown RBP eCLIP8.11□□□□□ -1.11
ZNF548-209ENST00000598895 HECTD4Q9Y4D8 3996 aa8.11□□□□□ -1.11
ZNF548-209ENST00000598895 IGLV5-45A0A087WSX0 123 aa8.1□□□□□ -1.11
ZNF548-209ENST00000598895 IBA57-AS1B1ANH7 110 aa8.1□□□□□ -1.11
ZNF548-209ENST00000598895 H3BT86 120 aa8.1□□□□□ -1.11
ZNF548-209ENST00000598895 RPL13AP40429 203 aaKnown RBP8.1□□□□□ -1.11
ZNF548-209ENST00000598895 HERVK_113P63121 156 aa8.1□□□□□ -1.11
ZNF548-209ENST00000598895 DGAT2L7PQ6IED9 249 aa8.1□□□□□ -1.11
ZNF548-209ENST00000598895 LITAFQ99732 161 aa8.1□□□□□ -1.11
ZNF548-209ENST00000598895 TRBV6-8A0A0A6YYG3 113 aa8.09□□□□□ -1.11
ZNF548-209ENST00000598895 C16orf90A8MZG2 172 aa8.09□□□□□ -1.11
ZNF548-209ENST00000598895 H7C2G1 150 aa8.09□□□□□ -1.11
ZNF548-209ENST00000598895 NDUFA1O15239 70 aa8.09□□□□□ -1.11
ZNF548-209ENST00000598895 PSCAO43653 123 aa8.09□□□□□ -1.11
ZNF548-209ENST00000598895 PRSS2P07478 247 aa8.09□□□□□ -1.11
ZNF548-209ENST00000598895 KRTAP10-2P60368 255 aa8.09□□□□□ -1.11
ZNF548-209ENST00000598895 PKD1P98161 4303 aa8.09□□□□□ -1.11
ZNF548-209ENST00000598895 NTM-AS1Q6ZSK4 140 aa8.08□□□□□ -1.12
ZNF548-209ENST00000598895 FAM19A3Q7Z5A8 133 aa8.08□□□□□ -1.12
ZNF548-209ENST00000598895 FAM104AQ969W3 186 aa8.08□□□□□ -1.12
ZNF548-209ENST00000598895 CHCHD5Q9BSY4 110 aa8.08□□□□□ -1.12
ZNF548-209ENST00000598895 PPDPFQ9H3Y8 114 aa8.08□□□□□ -1.12
ZNF548-209ENST00000598895 KLK12Q9UKR0 248 aa8.08□□□□□ -1.12
ZNF548-209ENST00000598895 A0A087WTM6 91 aa8.07□□□□□ -1.12
ZNF548-209ENST00000598895 TRAV8-3A0A0A6YYJ7 113 aa8.07□□□□□ -1.12
ZNF548-209ENST00000598895 TRIAP1O43715 76 aa8.07□□□□□ -1.12
ZNF548-209ENST00000598895 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
ZNF548-209ENST00000598895 UBE2WQ96B02 151 aa8.07□□□□□ -1.12
ZNF548-209ENST00000598895 CSDC2Q9Y534 153 aaKnown RBP8.07□□□□□ -1.12
ZNF548-209ENST00000598895 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.06□□□□□ -1.12
ZNF548-209ENST00000598895 TRAV8-4A0A0B4J246 113 aa8.06□□□□□ -1.12
ZNF548-209ENST00000598895 IGKV2-29A2NJV5 120 aaPredicted RBP8.06□□□□□ -1.12
ZNF548-209ENST00000598895 MT-ATP8P03928 68 aa8.06□□□□□ -1.12
ZNF548-209ENST00000598895 XGP55808 180 aa8.06□□□□□ -1.12
ZNF548-209ENST00000598895 GAGE6Q13070 117 aa8.06□□□□□ -1.12
ZNF548-209ENST00000598895 SNCGO76070 127 aa8.05□□□□□ -1.12
ZNF548-209ENST00000598895 HERV-K104P63124 156 aa8.05□□□□□ -1.12
ZNF548-209ENST00000598895 Q6Q795 121 aa8.05□□□□□ -1.12
ZNF548-209ENST00000598895 C2orf82Q6UX34 121 aa8.05□□□□□ -1.12
ZNF548-209ENST00000598895 NTN5Q8WTR8 489 aaPredicted RBP8.05□□□□□ -1.12
ZNF548-209ENST00000598895 IGLV5-39A0A0G2JS06 123 aa8.04□□□□□ -1.12
ZNF548-209ENST00000598895 LST1O00453 97 aa8.04□□□□□ -1.12
ZNF548-209ENST00000598895 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
ZNF548-209ENST00000598895 FAM240AA0A1B0GVK7 77 aa8.03□□□□□ -1.12
ZNF548-209ENST00000598895 H7C423 109 aa8.03□□□□□ -1.12
ZNF548-209ENST00000598895 LECT2O14960 151 aa8.03□□□□□ -1.12
ZNF548-209ENST00000598895 ANGP03950 147 aaKnown RBP8.03□□□□□ -1.12
ZNF548-209ENST00000598895 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
ZNF548-209ENST00000598895 ADAMTSL4-AS1Q5T5F5 129 aa8.03□□□□□ -1.12
ZNF548-209ENST00000598895 CLPSL2Q6UWE3 100 aa8.03□□□□□ -1.12
ZNF548-209ENST00000598895 TMEM101Q96IK0 257 aa8.03□□□□□ -1.12
ZNF548-209ENST00000598895 CDKN2A-AS1Q9UH64 79 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms