RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 LYPD5Q6UWN5 251 aa8.72□□□□□ -1.01
ZNF558-205ENST00000597304 ANKRD17O75179 2603 aaKnown RBP8.72□□□□□ -1.01
ZNF558-205ENST00000597304 NDUFC2O95298 119 aa8.71□□□□□ -1.01
ZNF558-205ENST00000597304 WNK1Q9H4A3 2382 aa8.71□□□□□ -1.01
ZNF558-205ENST00000597304 TRBV10-3A0A0K0K1G6 114 aa8.71□□□□□ -1.02
ZNF558-205ENST00000597304 USP9YO00507 2555 aaPredicted RBP8.71□□□□□ -1.02
ZNF558-205ENST00000597304 DOPEY1Q5JWR5 2465 aa8.71□□□□□ -1.02
ZNF558-205ENST00000597304 NDUFC2-KCTD14E9PQ53 114 aa8.7□□□□□ -1.02
ZNF558-205ENST00000597304 RNASE1P07998 156 aaKnown RBP8.7□□□□□ -1.02
ZNF558-205ENST00000597304 CLPSL2Q6UWE3 100 aa8.7□□□□□ -1.02
ZNF558-205ENST00000597304 CSNK1G2-AS1Q8NCQ2 148 aa8.7□□□□□ -1.02
ZNF558-205ENST00000597304 A0A1B0GUV1 79 aa8.68□□□□□ -1.02
ZNF558-205ENST00000597304 SPTBN4Q9H254 2564 aa8.68□□□□□ -1.02
ZNF558-205ENST00000597304 COX17Q14061 63 aa8.68□□□□□ -1.02
ZNF558-205ENST00000597304 CHD6Q8TD26 2715 aa8.68□□□□□ -1.02
ZNF558-205ENST00000597304 C6orf99Q4VX62 202 aa8.67□□□□□ -1.02
ZNF558-205ENST00000597304 C20orf197Q8N268 126 aa8.67□□□□□ -1.02
ZNF558-205ENST00000597304 MYO9AB2RTY4 2548 aa8.67□□□□□ -1.02
ZNF558-205ENST00000597304 DEFB130BP0DP73 79 aa8.67□□□□□ -1.02
ZNF558-205ENST00000597304 DEFB130AP0DP74 79 aa8.67□□□□□ -1.02
ZNF558-205ENST00000597304 GYPEP15421 78 aa8.67□□□□□ -1.02
ZNF558-205ENST00000597304 C19orf73Q9NVV2 129 aa8.66□□□□□ -1.02
ZNF558-205ENST00000597304 RBM3P98179 157 aaKnown RBP8.66□□□□□ -1.02
ZNF558-205ENST00000597304 C4orf26Q17RF5 130 aa8.66□□□□□ -1.02
ZNF558-205ENST00000597304 Q5XG85 94 aa8.66□□□□□ -1.02
ZNF558-205ENST00000597304 Q6ZQT0 140 aa8.66□□□□□ -1.02
ZNF558-205ENST00000597304 KIAA0087Q14695 138 aa8.65□□□□□ -1.02
ZNF558-205ENST00000597304 LINC00575Q6W349 94 aa8.65□□□□□ -1.02
ZNF558-205ENST00000597304 AKAP9Q99996 3911 aa8.65□□□□□ -1.03
ZNF558-205ENST00000597304 USP9XQ93008 2570 aaPredicted RBP8.65□□□□□ -1.03
ZNF558-205ENST00000597304 FAM236DA0A1B0GTK5 79 aa8.64□□□□□ -1.03
ZNF558-205ENST00000597304 DNAJC9-AS1A6NH13 148 aa8.64□□□□□ -1.03
ZNF558-205ENST00000597304 ZNF561-AS1K7EIQ3 104 aa8.64□□□□□ -1.03
ZNF558-205ENST00000597304 WIPF1O43516 503 aa8.64□□□□□ -1.03
ZNF558-205ENST00000597304 FAM236CP0DP71 79 aa8.64□□□□□ -1.03
ZNF558-205ENST00000597304 UTP20O75691 2785 aaKnown RBP8.64□□□□□ -1.03
ZNF558-205ENST00000597304 LOC110117498A0A087WWA1 95 aa8.63□□□□□ -1.03
ZNF558-205ENST00000597304 IGLV1-51P01701 117 aa8.63□□□□□ -1.03
ZNF558-205ENST00000597304 C9orf116Q5BN46 136 aaPredicted RBP8.63□□□□□ -1.03
ZNF558-205ENST00000597304 CD164L2Q6UWJ8 174 aa8.63□□□□□ -1.03
ZNF558-205ENST00000597304 LAMTOR3Q9UHA4 124 aa8.63□□□□□ -1.03
ZNF558-205ENST00000597304 FLNCQ14315 2725 aa8.63□□□□□ -1.03
ZNF558-205ENST00000597304 IGHV4-28A0A0C4DH34 117 aa8.63□□□□□ -1.03
ZNF558-205ENST00000597304 HRCT1Q6UXD1 115 aa8.63□□□□□ -1.03
ZNF558-205ENST00000597304 CUBNO60494 3623 aa8.63□□□□□ -1.03
ZNF558-205ENST00000597304 TRAV7A0A075B6U4 112 aa8.62□□□□□ -1.03
ZNF558-205ENST00000597304 NBPF19A0A087WUL8 3843 aa8.62□□□□□ -1.03
ZNF558-205ENST00000597304 A0A096LPF7 62 aa8.62□□□□□ -1.03
ZNF558-205ENST00000597304 BCE1O60756 84 aa8.62□□□□□ -1.03
ZNF558-205ENST00000597304 LINC00269Q8N2A0 174 aa8.62□□□□□ -1.03
ZNF558-205ENST00000597304 Q8NDZ9 215 aa8.62□□□□□ -1.03
ZNF558-205ENST00000597304 POLQO75417 2590 aa8.62□□□□□ -1.03
ZNF558-205ENST00000597304 FBN2P35556 2912 aa8.62□□□□□ -1.03
ZNF558-205ENST00000597304 C6orf223Q8N319 242 aa8.61□□□□□ -1.03
ZNF558-205ENST00000597304 CHCHD10Q8WYQ3 142 aaPredicted RBP8.61□□□□□ -1.03
ZNF558-205ENST00000597304 TLN2Q9Y4G6 2542 aa8.61□□□□□ -1.03
ZNF558-205ENST00000597304 IGLV10-54A0A075B6I4 117 aa8.61□□□□□ -1.03
ZNF558-205ENST00000597304 LINC01547P58512 204 aaPredicted RBP8.61□□□□□ -1.03
ZNF558-205ENST00000597304 TEX15Q9BXT5 2789 aa8.61□□□□□ -1.03
ZNF558-205ENST00000597304 HAMPP81172 84 aa8.6□□□□□ -1.03
ZNF558-205ENST00000597304 DEFB113Q30KQ7 82 aa8.6□□□□□ -1.03
ZNF558-205ENST00000597304 LINC00612Q8N6U2 182 aa8.6□□□□□ -1.03
ZNF558-205ENST00000597304 CFAP46Q8IYW2 2715 aa8.6□□□□□ -1.03
ZNF558-205ENST00000597304 Q6ZVQ6 151 aa8.6□□□□□ -1.03
ZNF558-205ENST00000597304 LINC00482Q8N8I6 264 aa8.6□□□□□ -1.03
ZNF558-205ENST00000597304 PRO0255Q9UI72 69 aa8.6□□□□□ -1.03
ZNF558-205ENST00000597304 JMJD1CQ15652 2540 aa8.59□□□□□ -1.03
ZNF558-205ENST00000597304 SETXQ7Z333 2677 aaKnown RBP8.59□□□□□ -1.03
ZNF558-205ENST00000597304 H7BZZ5 65 aa8.59□□□□□ -1.03
ZNF558-205ENST00000597304 M0R2N4 97 aa8.59□□□□□ -1.03
ZNF558-205ENST00000597304 BBC3Q96PG8 261 aaPredicted RBP8.59□□□□□ -1.03
ZNF558-205ENST00000597304 KRTAP10-9P60411 292 aa8.59□□□□□ -1.03
ZNF558-205ENST00000597304 PKD1L2Q7Z442 2459 aa8.59□□□□□ -1.03
ZNF558-205ENST00000597304 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
ZNF558-205ENST00000597304 REG3AQ06141 175 aa8.58□□□□□ -1.04
ZNF558-205ENST00000597304 ESM1Q9NQ30 184 aa8.58□□□□□ -1.04
ZNF558-205ENST00000597304 SERP1Q9Y6X1 66 aa8.58□□□□□ -1.04
ZNF558-205ENST00000597304 PDE6GP18545 87 aa8.57□□□□□ -1.04
ZNF558-205ENST00000597304 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
ZNF558-205ENST00000597304 Q6ZQY7 126 aa8.57□□□□□ -1.04
ZNF558-205ENST00000597304 CXCL6P80162 114 aa8.56□□□□□ -1.04
ZNF558-205ENST00000597304 ZNF843Q8N446 348 aa8.56□□□□□ -1.04
ZNF558-205ENST00000597304 MUC7Q8TAX7 377 aa8.56□□□□□ -1.04
ZNF558-205ENST00000597304 TRAV10A0A0B4J240 114 aa8.56□□□□□ -1.04
ZNF558-205ENST00000597304 H3BQ85 93 aa8.56□□□□□ -1.04
ZNF558-205ENST00000597304 C9orf66Q5T8R8 295 aa8.56□□□□□ -1.04
ZNF558-205ENST00000597304 IGLV6-57P01721 117 aa8.55□□□□□ -1.04
ZNF558-205ENST00000597304 Q8N3U1 123 aa8.55□□□□□ -1.04
ZNF558-205ENST00000597304 LINC01006Q8NI28 216 aa8.55□□□□□ -1.04
ZNF558-205ENST00000597304 EPG5Q9HCE0 2579 aa8.55□□□□□ -1.04
ZNF558-205ENST00000597304 EPM2AB3EWF7 344 aa8.55□□□□□ -1.04
ZNF558-205ENST00000597304 SPAG11BQ08648 103 aa8.55□□□□□ -1.04
ZNF558-205ENST00000597304 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
ZNF558-205ENST00000597304 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
ZNF558-205ENST00000597304 SNURFQ9Y675 71 aa8.54□□□□□ -1.04
ZNF558-205ENST00000597304 SPATA3Q8NHX4 192 aa8.53□□□□□ -1.04
ZNF558-205ENST00000597304 RMI2Q96E14 147 aa8.53□□□□□ -1.04
ZNF558-205ENST00000597304 X6R8D5 127 aa8.53□□□□□ -1.04
ZNF558-205ENST00000597304 LRRK2Q5S007 2527 aa8.53□□□□□ -1.04
ZNF558-205ENST00000597304 ACACBO00763 2458 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms