RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 KIAA0087Q14695 138 aa15.38■□□□□ 0.05
SPTBN4-210ENST00000596900 DYNC2H1Q8NCM8 4307 aaKnown RBP15.37■□□□□ 0.05
SPTBN4-210ENST00000596900 RPL24P83731 157 aaKnown RBP15.37■□□□□ 0.05
SPTBN4-210ENST00000596900 ADAMTSL4-AS1Q5T5F5 129 aa15.36■□□□□ 0.05
SPTBN4-210ENST00000596900 COPS9Q8WXC6 57 aa15.36■□□□□ 0.05
SPTBN4-210ENST00000596900 NHP2Q9NX24 153 aaKnown RBP15.36■□□□□ 0.05
SPTBN4-210ENST00000596900 FBN3Q75N90 2809 aa15.36■□□□□ 0.05
SPTBN4-210ENST00000596900 IFITM1P13164 125 aa15.35■□□□□ 0.05
SPTBN4-210ENST00000596900 MUC7Q8TAX7 377 aa15.35■□□□□ 0.05
SPTBN4-210ENST00000596900 SMIM13P0DJ93 91 aa15.34■□□□□ 0.05
SPTBN4-210ENST00000596900 MUSTN1Q8IVN3 82 aa15.34■□□□□ 0.05
SPTBN4-210ENST00000596900 COX11Q9Y6N1 276 aa15.34■□□□□ 0.05
SPTBN4-210ENST00000596900 C2orf82Q6UX34 121 aa15.33■□□□□ 0.05
SPTBN4-210ENST00000596900 A0A0U1RRA0 63 aa15.33■□□□□ 0.04
SPTBN4-210ENST00000596900 ZNF561-AS1K7EIQ3 104 aa15.32■□□□□ 0.04
SPTBN4-210ENST00000596900 ERG28Q9UKR5 140 aa15.32■□□□□ 0.04
SPTBN4-210ENST00000596900 CSMD3Q7Z407 3707 aa15.32■□□□□ 0.04
SPTBN4-210ENST00000596900 DNAH7Q8WXX0 4024 aa15.31■□□□□ 0.04
SPTBN4-210ENST00000596900 LINC00158P58513 81 aa15.31■□□□□ 0.04
SPTBN4-210ENST00000596900 TTC32Q5I0X7 151 aa15.31■□□□□ 0.04
SPTBN4-210ENST00000596900 DAND5Q8N907 189 aa15.31■□□□□ 0.04
SPTBN4-210ENST00000596900 WWC2-AS2Q96NR7 200 aa15.31■□□□□ 0.04
SPTBN4-210ENST00000596900 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.29■□□□□ 0.04
SPTBN4-210ENST00000596900 A0A1B0GWB2 263 aa15.29■□□□□ 0.04
SPTBN4-210ENST00000596900 A4D1N5 150 aa15.29■□□□□ 0.04
SPTBN4-210ENST00000596900 TAX1BP3O14907 124 aa15.29■□□□□ 0.04
SPTBN4-210ENST00000596900 COX17Q14061 63 aa15.29■□□□□ 0.04
SPTBN4-210ENST00000596900 NTN5Q8WTR8 489 aaPredicted RBP15.29■□□□□ 0.04
SPTBN4-210ENST00000596900 PFN2P35080 140 aa15.28■□□□□ 0.04
SPTBN4-210ENST00000596900 NPC2P61916 151 aa15.28■□□□□ 0.04
SPTBN4-210ENST00000596900 C15orf56Q8N910 161 aa15.28■□□□□ 0.04
SPTBN4-210ENST00000596900 LINC00308Q8TCZ7 52 aa15.28■□□□□ 0.04
SPTBN4-210ENST00000596900 MIR7-3HGQ8N6C7 128 aa15.27■□□□□ 0.04
SPTBN4-210ENST00000596900 PPDPFQ9H3Y8 114 aa15.27■□□□□ 0.04
SPTBN4-210ENST00000596900 C6orf223Q8N319 242 aa15.27■□□□□ 0.03
SPTBN4-210ENST00000596900 K7ERJ3 54 aa15.26■□□□□ 0.03
SPTBN4-210ENST00000596900 HIGD2BQ4VC39 106 aa15.26■□□□□ 0.03
SPTBN4-210ENST00000596900 RAB37Q96AX2 223 aa15.26■□□□□ 0.03
SPTBN4-210ENST00000596900 GVQW2A0A096LPI5 108 aaPredicted RBP15.25■□□□□ 0.03
SPTBN4-210ENST00000596900 F8WDY8 70 aa15.25■□□□□ 0.03
SPTBN4-210ENST00000596900 LINC00526Q96FQ7 95 aa15.25■□□□□ 0.03
SPTBN4-210ENST00000596900 C2orf48Q96LS8 159 aa15.25■□□□□ 0.03
SPTBN4-210ENST00000596900 KRTAP1-5Q9BYS1 174 aa15.25■□□□□ 0.03
SPTBN4-210ENST00000596900 A0A1B0GV90 55 aa15.25■□□□□ 0.03
SPTBN4-210ENST00000596900 UNQ6190/PRO20217Q6UXQ8 127 aa15.24■□□□□ 0.03
SPTBN4-210ENST00000596900 CAMK2N2Q96S95 79 aa15.24■□□□□ 0.03
SPTBN4-210ENST00000596900 NBDYA0A0U1RRE5 68 aa15.23■□□□□ 0.03
SPTBN4-210ENST00000596900 A0A0B4J2C4 111 aa15.23■□□□□ 0.03
SPTBN4-210ENST00000596900 CFC1BP0CG36 223 aa15.23■□□□□ 0.03
SPTBN4-210ENST00000596900 CFC1P0CG37 223 aa15.23■□□□□ 0.03
SPTBN4-210ENST00000596900 TRBV30A0A0K0K1B3 111 aa15.21■□□□□ 0.03
SPTBN4-210ENST00000596900 STARD9Q9P2P6 4700 aa15.21■□□□□ 0.03
SPTBN4-210ENST00000596900 PLECQ15149 4684 aaKnown RBP15.21■□□□□ 0.03
SPTBN4-210ENST00000596900 C9orf118A6NHY6 69 aa15.2■□□□□ 0.02
SPTBN4-210ENST00000596900 C10orf25Q5T742 122 aa15.2■□□□□ 0.02
SPTBN4-210ENST00000596900 LYSTQ99698 3801 aa15.2■□□□□ 0.02
SPTBN4-210ENST00000596900 USP17L23D6RBM5 183 aa15.19■□□□□ 0.02
SPTBN4-210ENST00000596900 PSCAO43653 123 aa15.19■□□□□ 0.02
SPTBN4-210ENST00000596900 SOSTDC1Q6X4U4 206 aa15.19■□□□□ 0.02
SPTBN4-210ENST00000596900 PRO1854Q9UHT4 67 aa15.19■□□□□ 0.02
SPTBN4-210ENST00000596900 EIF4EBP3O60516 100 aaPredicted RBP15.18■□□□□ 0.02
SPTBN4-210ENST00000596900 C9orf116Q5BN46 136 aaPredicted RBP15.17■□□□□ 0.02
SPTBN4-210ENST00000596900 C6orf48Q9UBA6 75 aa15.17■□□□□ 0.02
SPTBN4-210ENST00000596900 H3BUT2 72 aa15.16■□□□□ 0.02
SPTBN4-210ENST00000596900 CASC10Q5T4H9 136 aa15.16■□□□□ 0.02
SPTBN4-210ENST00000596900 PGPEP1Q9NXJ5 209 aa15.16■□□□□ 0.02
SPTBN4-210ENST00000596900 TENM2Q9NT68 2774 aa15.16■□□□□ 0.02
SPTBN4-210ENST00000596900 Q6ZRU5 148 aa15.15■□□□□ 0.02
SPTBN4-210ENST00000596900 SND1-IT1Q9HBX3 110 aa15.15■□□□□ 0.02
SPTBN4-210ENST00000596900 DNAH1Q9P2D7 4330 aa15.15■□□□□ 0.02
SPTBN4-210ENST00000596900 SYCNQ0VAF6 134 aa15.14■□□□□ 0.01
SPTBN4-210ENST00000596900 C3orf84H3BNL1 204 aa15.13■□□□□ 0.01
SPTBN4-210ENST00000596900 LOC107984156A0A0G2JMH3 177 aa15.12■□□□□ 0.01
SPTBN4-210ENST00000596900 ARL17AQ8IVW1 177 aa15.12■□□□□ 0.01
SPTBN4-210ENST00000596900 NAA38Q9BRA0 125 aaKnown RBP15.11■□□□□ 0.01
SPTBN4-210ENST00000596900 TGP01266 2768 aa15.11■□□□□ 0.01
SPTBN4-210ENST00000596900 CARD19Q96LW7 228 aa15.1■□□□□ 0.01
SPTBN4-210ENST00000596900 A0A1W2PPM0 123 aa15.1■□□□□ 0.01
SPTBN4-210ENST00000596900 TSPAN13O95857 204 aa15.1■□□□□ 0.01
SPTBN4-210ENST00000596900 VAMP3Q15836 100 aa15.1■□□□□ 0.01
SPTBN4-210ENST00000596900 LECT2O14960 151 aa15.09■□□□□ 0.01
SPTBN4-210ENST00000596900 FABP2P12104 132 aa15.08■□□□□ 0.01
SPTBN4-210ENST00000596900 C14orf177Q52M58 125 aa15.08■□□□□ 0.01
SPTBN4-210ENST00000596900 Q1RN00 199 aa15.08■□□□□ 0
SPTBN4-210ENST00000596900 RNF151Q2KHN1 245 aa15.08■□□□□ 0
SPTBN4-210ENST00000596900 NDUFC2-KCTD14E9PQ53 114 aa15.07■□□□□ 0
SPTBN4-210ENST00000596900 TRAV13-2A0A0B4J235 113 aa15.06■□□□□ 0
SPTBN4-210ENST00000596900 M0R2N4 97 aa15.06■□□□□ 0
SPTBN4-210ENST00000596900 NDUFC2O95298 119 aa15.06■□□□□ 0
SPTBN4-210ENST00000596900 LY6G6CO95867 125 aa15.06■□□□□ 0
SPTBN4-210ENST00000596900 H7C2G1 150 aa15.05■□□□□ -0
SPTBN4-210ENST00000596900 RPL13AP40429 203 aaKnown RBP15.05■□□□□ -0
SPTBN4-210ENST00000596900 LYRM7Q5U5X0 104 aa15.05■□□□□ -0
SPTBN4-210ENST00000596900 VPS13DQ5THJ4 4388 aa15.04■□□□□ -0
SPTBN4-210ENST00000596900 LINC00476Q8WZB0 136 aa15.03■□□□□ -0
SPTBN4-210ENST00000596900 PSMB2P49721 201 aa15.02■□□□□ -0
SPTBN4-210ENST00000596900 Q6ZR54 194 aa15.02■□□□□ -0
SPTBN4-210ENST00000596900 Q6ZRN7 208 aaPredicted RBP15.02■□□□□ -0
SPTBN4-210ENST00000596900 IGKV2-28A0A075B6P5 120 aa15.01□□□□□ -0.01
SPTBN4-210ENST00000596900 IGKV2D-28P01615 120 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms