RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 LINC01546A6NGU7 62 aa10.93□□□□□ -0.66
PNKP-206ENST00000595792 FABP9Q0Z7S8 132 aa10.93□□□□□ -0.66
PNKP-206ENST00000595792 GAGE2EQ4V326 116 aa10.93□□□□□ -0.66
PNKP-206ENST00000595792 GAGE2DQ9UEU5 116 aa10.93□□□□□ -0.66
PNKP-206ENST00000595792 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
PNKP-206ENST00000595792 SEC11AP67812 179 aa10.92□□□□□ -0.66
PNKP-206ENST00000595792 TRBV30A0A0K0K1B3 111 aa10.91□□□□□ -0.66
PNKP-206ENST00000595792 MRPL18Q9H0U6 180 aaKnown RBP10.91□□□□□ -0.66
PNKP-206ENST00000595792 C1orf137Q5JT78 98 aa10.9□□□□□ -0.66
PNKP-206ENST00000595792 C9orf129Q5T035 196 aaKnown RBP10.9□□□□□ -0.66
PNKP-206ENST00000595792 ERASQ7Z444 233 aa10.9□□□□□ -0.66
PNKP-206ENST00000595792 SCGB3A1Q96QR1 104 aa10.9□□□□□ -0.66
PNKP-206ENST00000595792 SMCO4Q9NRQ5 59 aa10.9□□□□□ -0.66
PNKP-206ENST00000595792 TOMM7Q9P0U1 55 aa10.9□□□□□ -0.66
PNKP-206ENST00000595792 FAM19A5Q7Z5A7 132 aaPredicted RBP10.89□□□□□ -0.67
PNKP-206ENST00000595792 TRAPPC1Q9Y5R8 145 aa10.89□□□□□ -0.67
PNKP-206ENST00000595792 RNF213Q63HN8 5207 aa10.88□□□□□ -0.67
PNKP-206ENST00000595792 NDUFC2-KCTD14E9PQ53 114 aa10.88□□□□□ -0.67
PNKP-206ENST00000595792 HERVK_113P63121 156 aa10.88□□□□□ -0.67
PNKP-206ENST00000595792 FA2HQ7L5A8 372 aa10.88□□□□□ -0.67
PNKP-206ENST00000595792 Q8IZM0 81 aa10.88□□□□□ -0.67
PNKP-206ENST00000595792 URB1-AS1Q96HZ7 61 aa10.88□□□□□ -0.67
PNKP-206ENST00000595792 A0A096LNJ9 63 aa10.86□□□□□ -0.67
PNKP-206ENST00000595792 PACRGQ96M98 296 aaPredicted RBP10.86□□□□□ -0.67
PNKP-206ENST00000595792 GEMIN7Q9H840 131 aaKnown RBP10.86□□□□□ -0.67
PNKP-206ENST00000595792 SMIM1B2RUZ4 78 aa10.85□□□□□ -0.67
PNKP-206ENST00000595792 RAB5BP61020 215 aa10.85□□□□□ -0.67
PNKP-206ENST00000595792 C6orf226Q5I0X4 101 aa10.85□□□□□ -0.67
PNKP-206ENST00000595792 SLC7A5P1Q8MH63 180 aa10.85□□□□□ -0.67
PNKP-206ENST00000595792 LINC00469Q8N7U9 141 aa10.85□□□□□ -0.67
PNKP-206ENST00000595792 IGLV5-45A0A087WSX0 123 aa10.84□□□□□ -0.67
PNKP-206ENST00000595792 PRSS2P07478 247 aa10.84□□□□□ -0.67
PNKP-206ENST00000595792 CST9LQ9H4G1 147 aa10.84□□□□□ -0.67
PNKP-206ENST00000595792 TINCRA0A1B0GVN0 87 aa10.83□□□□□ -0.68
PNKP-206ENST00000595792 M0QXV9 152 aa10.83□□□□□ -0.68
PNKP-206ENST00000595792 CKS1BP61024 79 aa10.83□□□□□ -0.68
PNKP-206ENST00000595792 C18orf32Q8TCD1 76 aa10.83□□□□□ -0.68
PNKP-206ENST00000595792 IGLV7-43P04211 117 aa10.82□□□□□ -0.68
PNKP-206ENST00000595792 LINC00614P0C842 121 aa10.81□□□□□ -0.68
PNKP-206ENST00000595792 XAGE1AQ9HD64 81 aa10.81□□□□□ -0.68
PNKP-206ENST00000595792 F8VRH5 84 aa10.8□□□□□ -0.68
PNKP-206ENST00000595792 PMVKQ15126 192 aa10.8□□□□□ -0.68
PNKP-206ENST00000595792 PRR26Q8N8Z3 221 aa10.8□□□□□ -0.68
PNKP-206ENST00000595792 LPAP08519 4548 aa10.79□□□□□ -0.68
PNKP-206ENST00000595792 SPINK8P0C7L1 97 aa10.79□□□□□ -0.68
PNKP-206ENST00000595792 PDZD11Q5EBL8 140 aa10.79□□□□□ -0.68
PNKP-206ENST00000595792 YPEL4Q96NS1 127 aa10.79□□□□□ -0.68
PNKP-206ENST00000595792 PMCHL1Q16048 86 aa10.78□□□□□ -0.68
PNKP-206ENST00000595792 COX7B2Q8TF08 81 aa10.78□□□□□ -0.68
PNKP-206ENST00000595792 UBE2BP63146 152 aa10.77□□□□□ -0.69
PNKP-206ENST00000595792 DIRC1Q969H9 104 aa10.77□□□□□ -0.69
PNKP-206ENST00000595792 H0Y9J4 135 aa10.76□□□□□ -0.69
PNKP-206ENST00000595792 HBDP02042 147 aa10.76□□□□□ -0.69
PNKP-206ENST00000595792 C22orf24Q9Y442 160 aa10.76□□□□□ -0.69
PNKP-206ENST00000595792 IGLC3P0DOY3 106 aa10.75□□□□□ -0.69
PNKP-206ENST00000595792 CXCL5P42830 114 aa10.75□□□□□ -0.69
PNKP-206ENST00000595792 ATP5LO75964 103 aa10.74□□□□□ -0.69
PNKP-206ENST00000595792 H3BRM9 83 aa10.73□□□□□ -0.69
PNKP-206ENST00000595792 ZNF22P17026 224 aaPredicted RBP10.73□□□□□ -0.69
PNKP-206ENST00000595792 CHCHD1Q96BP2 118 aaKnown RBP10.73□□□□□ -0.69
PNKP-206ENST00000595792 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
PNKP-206ENST00000595792 KRTAP1-4P0C5Y4 121 aa10.72□□□□□ -0.69
PNKP-206ENST00000595792 NDUFA6P56556 154 aa10.72□□□□□ -0.69
PNKP-206ENST00000595792 C11orf86A6NJI1 115 aa10.69□□□□□ -0.7
PNKP-206ENST00000595792 TP73-AS1Q9UF72 201 aa10.69□□□□□ -0.7
PNKP-206ENST00000595792 MRPL55Q7Z7F7 128 aaKnown RBP10.68□□□□□ -0.7
PNKP-206ENST00000595792 BAGE3Q86Y29 109 aa10.67□□□□□ -0.7
PNKP-206ENST00000595792 CBLN2Q8IUK8 224 aa10.67□□□□□ -0.7
PNKP-206ENST00000595792 LINC00167Q96N53 147 aa10.67□□□□□ -0.7
PNKP-206ENST00000595792 IGLV1-50A0A075B6I6 118 aa10.65□□□□□ -0.7
PNKP-206ENST00000595792 ZNF861PO60384 105 aa10.65□□□□□ -0.7
PNKP-206ENST00000595792 HSBP1O75506 76 aa10.65□□□□□ -0.7
PNKP-206ENST00000595792 SCO1O75880 301 aa10.65□□□□□ -0.7
PNKP-206ENST00000595792 LBHQ53QV2 105 aaPredicted RBP10.65□□□□□ -0.7
PNKP-206ENST00000595792 IGLV5-37A0A075B6J1 123 aa10.64□□□□□ -0.71
PNKP-206ENST00000595792 RPL37AP8A6NKH3 93 aa10.64□□□□□ -0.71
PNKP-206ENST00000595792 NUPR1O60356 82 aa10.64□□□□□ -0.71
PNKP-206ENST00000595792 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
PNKP-206ENST00000595792 GAGE10A6NGK3 116 aa10.63□□□□□ -0.71
PNKP-206ENST00000595792 TRGC2P03986 189 aa10.63□□□□□ -0.71
PNKP-206ENST00000595792 PFN2P35080 140 aa10.63□□□□□ -0.71
PNKP-206ENST00000595792 TRAV12-1A0A0B4J245 112 aa10.62□□□□□ -0.71
PNKP-206ENST00000595792 Q8NDZ9 215 aa10.62□□□□□ -0.71
PNKP-206ENST00000595792 ZNF625Q96I27 306 aaPredicted RBP10.62□□□□□ -0.71
PNKP-206ENST00000595792 TMEM170BQ5T4T1 132 aa10.61□□□□□ -0.71
PNKP-206ENST00000595792 IFI27L1Q96BM0 104 aa10.61□□□□□ -0.71
PNKP-206ENST00000595792 ERG28Q9UKR5 140 aa10.61□□□□□ -0.71
PNKP-206ENST00000595792 CHTOPQ9Y3Y2 248 aaKnown RBP10.61□□□□□ -0.71
PNKP-206ENST00000595792 BCE1O60756 84 aa10.6□□□□□ -0.71
PNKP-206ENST00000595792 LINC00310P59036 64 aa10.6□□□□□ -0.71
PNKP-206ENST00000595792 FAM19A2Q8N3H0 131 aa10.6□□□□□ -0.71
PNKP-206ENST00000595792 SND1-IT1Q9HBX3 110 aa10.6□□□□□ -0.71
PNKP-206ENST00000595792 VPREB1P12018 145 aa10.59□□□□□ -0.71
PNKP-206ENST00000595792 TMEM223A0PJW6 202 aa10.58□□□□□ -0.72
PNKP-206ENST00000595792 KRTAP13-1Q8IUC0 172 aa10.58□□□□□ -0.72
PNKP-206ENST00000595792 COLCA2A8K830 154 aa10.57□□□□□ -0.72
PNKP-206ENST00000595792 LEPROTL1O95214 131 aa10.56□□□□□ -0.72
PNKP-206ENST00000595792 RPL13AP40429 203 aaKnown RBP10.56□□□□□ -0.72
PNKP-206ENST00000595792 COX17Q14061 63 aa10.56□□□□□ -0.72
PNKP-206ENST00000595792 NKAPP1Q8N9T2 125 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms