RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 C1orf134Q5TEV5 83 aa10.79□□□□□ -0.68
USHBP1-204ENST00000594190 C5orf38Q86SI9 138 aa10.79□□□□□ -0.68
USHBP1-204ENST00000594190 NDUFA1O15239 70 aa10.78□□□□□ -0.68
USHBP1-204ENST00000594190 TSPEAR-AS2P59090 65 aa10.78□□□□□ -0.68
USHBP1-204ENST00000594190 SCGB1D4Q6XE38 83 aa10.78□□□□□ -0.68
USHBP1-204ENST00000594190 COX7B2Q8TF08 81 aa10.78□□□□□ -0.68
USHBP1-204ENST00000594190 NDUFA12Q9UI09 145 aa10.78□□□□□ -0.68
USHBP1-204ENST00000594190 NBDYA0A0U1RRE5 68 aa10.77□□□□□ -0.69
USHBP1-204ENST00000594190 PRSS2P07478 247 aa10.77□□□□□ -0.69
USHBP1-204ENST00000594190 CXCL5P42830 114 aa10.77□□□□□ -0.69
USHBP1-204ENST00000594190 HERV-K104P63124 156 aa10.77□□□□□ -0.69
USHBP1-204ENST00000594190 Q8IZM0 81 aa10.77□□□□□ -0.69
USHBP1-204ENST00000594190 MAPKAPK5-AS1Q8N8E1 139 aa10.77□□□□□ -0.69
USHBP1-204ENST00000594190 TNP2Q05952 138 aa10.76□□□□□ -0.69
USHBP1-204ENST00000594190 C2orf91Q6ZV80 131 aa10.76□□□□□ -0.69
USHBP1-204ENST00000594190 TM2D2Q9BX73 214 aa10.76□□□□□ -0.69
USHBP1-204ENST00000594190 IGKV2D-24A0A075B6R9 120 aa10.75□□□□□ -0.69
USHBP1-204ENST00000594190 LINC00587B1AMM8 73 aa10.75□□□□□ -0.69
USHBP1-204ENST00000594190 TAL2Q16559 108 aa10.75□□□□□ -0.69
USHBP1-204ENST00000594190 KRTAP1-5Q9BYS1 174 aa10.75□□□□□ -0.69
USHBP1-204ENST00000594190 TTTY13Q9BZ97 58 aa10.75□□□□□ -0.69
USHBP1-204ENST00000594190 CFAP161Q6P656 301 aa10.74□□□□□ -0.69
USHBP1-204ENST00000594190 TMEM238C9JI98 176 aa10.73□□□□□ -0.69
USHBP1-204ENST00000594190 F8WDY8 70 aa10.73□□□□□ -0.69
USHBP1-204ENST00000594190 M0R143 59 aa10.73□□□□□ -0.69
USHBP1-204ENST00000594190 TIMM17BO60830 172 aa10.73□□□□□ -0.69
USHBP1-204ENST00000594190 CTAG1AP78358 180 aa10.73□□□□□ -0.69
USHBP1-204ENST00000594190 HSD52Q0P140 79 aa10.73□□□□□ -0.69
USHBP1-204ENST00000594190 CIRBPQ14011 172 aaKnown RBP10.73□□□□□ -0.69
USHBP1-204ENST00000594190 C6orf226Q5I0X4 101 aa10.73□□□□□ -0.69
USHBP1-204ENST00000594190 KRTAP26-1Q6PEX3 210 aa10.73□□□□□ -0.69
USHBP1-204ENST00000594190 ORAOV1Q8WV07 137 aa10.73□□□□□ -0.69
USHBP1-204ENST00000594190 TOMM7Q9P0U1 55 aa10.73□□□□□ -0.69
USHBP1-204ENST00000594190 Q6ZVH6 145 aa10.72□□□□□ -0.69
USHBP1-204ENST00000594190 C6orf223Q8N319 242 aa10.72□□□□□ -0.69
USHBP1-204ENST00000594190 ZNF625Q96I27 306 aaPredicted RBP10.72□□□□□ -0.69
USHBP1-204ENST00000594190 SPANXB1Q9NS25 103 aaPredicted RBP10.72□□□□□ -0.69
USHBP1-204ENST00000594190 A0A0J9YXY3 114 aa10.71□□□□□ -0.69
USHBP1-204ENST00000594190 GCSHP23434 173 aa10.71□□□□□ -0.69
USHBP1-204ENST00000594190 Q9HAA7 133 aa10.71□□□□□ -0.69
USHBP1-204ENST00000594190 CKS1BP61024 79 aa10.7□□□□□ -0.7
USHBP1-204ENST00000594190 CDK2AP2O75956 126 aa10.69□□□□□ -0.7
USHBP1-204ENST00000594190 SPAG11BQ08648 103 aa10.69□□□□□ -0.7
USHBP1-204ENST00000594190 COPS9Q8WXC6 57 aa10.69□□□□□ -0.7
USHBP1-204ENST00000594190 TP73-AS1Q9UF72 201 aa10.69□□□□□ -0.7
USHBP1-204ENST00000594190 C16orf90A8MZG2 172 aa10.68□□□□□ -0.7
USHBP1-204ENST00000594190 SRSF9Q13242 221 aaKnown RBP eCLIP10.68□□□□□ -0.7
USHBP1-204ENST00000594190 KIAA0087Q14695 138 aa10.68□□□□□ -0.7
USHBP1-204ENST00000594190 HIST1H4GQ99525 98 aa10.68□□□□□ -0.7
USHBP1-204ENST00000594190 ZNF561-AS1K7EIQ3 104 aa10.67□□□□□ -0.7
USHBP1-204ENST00000594190 C2orf48Q96LS8 159 aa10.67□□□□□ -0.7
USHBP1-204ENST00000594190 GVQW2A0A096LPI5 108 aaPredicted RBP10.66□□□□□ -0.7
USHBP1-204ENST00000594190 MEIG1Q5JSS6 88 aa10.66□□□□□ -0.7
USHBP1-204ENST00000594190 SPANXDQ9BXN6 97 aa10.66□□□□□ -0.7
USHBP1-204ENST00000594190 SPANXCQ9NY87 97 aa10.66□□□□□ -0.7
USHBP1-204ENST00000594190 IFITM1P13164 125 aa10.65□□□□□ -0.7
USHBP1-204ENST00000594190 COX17Q14061 63 aa10.65□□□□□ -0.7
USHBP1-204ENST00000594190 LBHQ53QV2 105 aaPredicted RBP10.65□□□□□ -0.7
USHBP1-204ENST00000594190 Q6ZRN7 208 aaPredicted RBP10.65□□□□□ -0.7
USHBP1-204ENST00000594190 PPDPFQ9H3Y8 114 aa10.65□□□□□ -0.7
USHBP1-204ENST00000594190 TMEM238LA0A1B0GVL6 79 aa10.64□□□□□ -0.71
USHBP1-204ENST00000594190 A6NJY4 79 aa10.64□□□□□ -0.71
USHBP1-204ENST00000594190 CEND1Q8N111 149 aa10.64□□□□□ -0.71
USHBP1-204ENST00000594190 NTN5Q8WTR8 489 aaPredicted RBP10.64□□□□□ -0.71
USHBP1-204ENST00000594190 PTTG1IPP53801 180 aa10.63□□□□□ -0.71
USHBP1-204ENST00000594190 BVES-AS1Q5T3Y7 98 aa10.63□□□□□ -0.71
USHBP1-204ENST00000594190 Q8N1X5 172 aa10.63□□□□□ -0.71
USHBP1-204ENST00000594190 C15orf56Q8N910 161 aa10.63□□□□□ -0.71
USHBP1-204ENST00000594190 LITAFQ99732 161 aa10.63□□□□□ -0.71
USHBP1-204ENST00000594190 TRBV30A0A0K0K1B3 111 aa10.62□□□□□ -0.71
USHBP1-204ENST00000594190 PSCAO43653 123 aa10.62□□□□□ -0.71
USHBP1-204ENST00000594190 HINT1P49773 126 aaPredicted RBP10.62□□□□□ -0.71
USHBP1-204ENST00000594190 C14orf177Q52M58 125 aa10.62□□□□□ -0.71
USHBP1-204ENST00000594190 ERG28Q9UKR5 140 aa10.62□□□□□ -0.71
USHBP1-204ENST00000594190 A6NDN8 102 aa10.61□□□□□ -0.71
USHBP1-204ENST00000594190 KRTAP10-2P60368 255 aa10.61□□□□□ -0.71
USHBP1-204ENST00000594190 RPL24P83731 157 aaKnown RBP10.61□□□□□ -0.71
USHBP1-204ENST00000594190 SNHG12Q9BXW3 62 aa10.61□□□□□ -0.71
USHBP1-204ENST00000594190 CAMK2N2Q96S95 79 aa10.6□□□□□ -0.71
USHBP1-204ENST00000594190 USP17L23D6RBM5 183 aa10.59□□□□□ -0.71
USHBP1-204ENST00000594190 C2orf82Q6UX34 121 aa10.59□□□□□ -0.71
USHBP1-204ENST00000594190 SMIM13P0DJ93 91 aa10.58□□□□□ -0.72
USHBP1-204ENST00000594190 LINC00158P58513 81 aa10.58□□□□□ -0.72
USHBP1-204ENST00000594190 BATFQ16520 125 aa10.58□□□□□ -0.72
USHBP1-204ENST00000594190 HIGD2BQ4VC39 106 aa10.58□□□□□ -0.72
USHBP1-204ENST00000594190 COL5A1-AS1Q5SY13 56 aa10.58□□□□□ -0.72
USHBP1-204ENST00000594190 RNF151Q2KHN1 245 aa10.57□□□□□ -0.72
USHBP1-204ENST00000594190 ADAMTSL4-AS1Q5T5F5 129 aa10.57□□□□□ -0.72
USHBP1-204ENST00000594190 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.56□□□□□ -0.72
USHBP1-204ENST00000594190 SYCNQ0VAF6 134 aa10.56□□□□□ -0.72
USHBP1-204ENST00000594190 UNQ6190/PRO20217Q6UXQ8 127 aa10.56□□□□□ -0.72
USHBP1-204ENST00000594190 EREGO14944 169 aa10.55□□□□□ -0.72
USHBP1-204ENST00000594190 FXYD2P54710 66 aa10.55□□□□□ -0.72
USHBP1-204ENST00000594190 MUSTN1Q8IVN3 82 aa10.55□□□□□ -0.72
USHBP1-204ENST00000594190 MIR7-3HGQ8N6C7 128 aa10.55□□□□□ -0.72
USHBP1-204ENST00000594190 LINC00308Q8TCZ7 52 aa10.55□□□□□ -0.72
USHBP1-204ENST00000594190 PFN2P35080 140 aa10.54□□□□□ -0.72
USHBP1-204ENST00000594190 FAT1Q14517 4588 aa10.54□□□□□ -0.72
USHBP1-204ENST00000594190 CARD19Q96LW7 228 aa10.54□□□□□ -0.72
USHBP1-204ENST00000594190 VPS13BQ7Z7G8 4022 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms