RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 LPAP08519 4548 aa8.21□□□□□ -1.09
H3F3B-213ENST00000593254 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.21□□□□□ -1.1
H3F3B-213ENST00000593254 IFI27P40305 119 aaPredicted RBP8.21□□□□□ -1.1
H3F3B-213ENST00000593254 GAGE2BQ13066 116 aa8.21□□□□□ -1.1
H3F3B-213ENST00000593254 PDZD11Q5EBL8 140 aa8.21□□□□□ -1.1
H3F3B-213ENST00000593254 RNF151Q2KHN1 245 aa8.2□□□□□ -1.1
H3F3B-213ENST00000593254 BAGE3Q86Y29 109 aa8.2□□□□□ -1.1
H3F3B-213ENST00000593254 ORAOV1Q8WV07 137 aa8.2□□□□□ -1.1
H3F3B-213ENST00000593254 MAP1LC3AQ9H492 121 aa8.2□□□□□ -1.1
H3F3B-213ENST00000593254 IGLV4-3A0A075B6K6 122 aa8.19□□□□□ -1.1
H3F3B-213ENST00000593254 F8WDY8 70 aa8.19□□□□□ -1.1
H3F3B-213ENST00000593254 LINC00310P59036 64 aa8.19□□□□□ -1.1
H3F3B-213ENST00000593254 MRPL35Q9NZE8 188 aaKnown RBP8.19□□□□□ -1.1
H3F3B-213ENST00000593254 A0A0J9YXV3 536 aa8.18□□□□□ -1.1
H3F3B-213ENST00000593254 LOC389332A0A1B0GUA5 103 aa8.18□□□□□ -1.1
H3F3B-213ENST00000593254 A0A1W2PNN7 141 aa8.18□□□□□ -1.1
H3F3B-213ENST00000593254 SERF1AO75920 110 aa8.18□□□□□ -1.1
H3F3B-213ENST00000593254 RPL18AQ02543 176 aaKnown RBP8.18□□□□□ -1.1
H3F3B-213ENST00000593254 ODF1Q14990 250 aa8.18□□□□□ -1.1
H3F3B-213ENST00000593254 Q6ZRP5 223 aa8.18□□□□□ -1.1
H3F3B-213ENST00000593254 Q8N8P6 123 aa8.18□□□□□ -1.1
H3F3B-213ENST00000593254 TMEM141Q96I45 108 aa8.18□□□□□ -1.1
H3F3B-213ENST00000593254 ALKBH7Q9BT30 221 aaPredicted RBP8.18□□□□□ -1.1
H3F3B-213ENST00000593254 MUC2Q02817 5179 aa8.17□□□□□ -1.1
H3F3B-213ENST00000593254 A0A087WZ39 114 aa8.17□□□□□ -1.1
H3F3B-213ENST00000593254 NDUFA1O15239 70 aa8.17□□□□□ -1.1
H3F3B-213ENST00000593254 C9orf116Q5BN46 136 aaPredicted RBP8.17□□□□□ -1.1
H3F3B-213ENST00000593254 LINC00242Q5T6M2 205 aa8.17□□□□□ -1.1
H3F3B-213ENST00000593254 C18orf32Q8TCD1 76 aa8.17□□□□□ -1.1
H3F3B-213ENST00000593254 LINC01600Q96MT4 127 aa8.17□□□□□ -1.1
H3F3B-213ENST00000593254 C10orf25Q5T742 122 aa8.16□□□□□ -1.1
H3F3B-213ENST00000593254 SPINK6Q6UWN8 80 aa8.16□□□□□ -1.1
H3F3B-213ENST00000593254 C2orf66Q6UXQ4 117 aa8.16□□□□□ -1.1
H3F3B-213ENST00000593254 TEX43Q6ZNM6 134 aa8.16□□□□□ -1.1
H3F3B-213ENST00000593254 CHCHD1Q96BP2 118 aaKnown RBP8.16□□□□□ -1.1
H3F3B-213ENST00000593254 CYSLTR1Q9Y271 337 aa8.16□□□□□ -1.1
H3F3B-213ENST00000593254 PCP4L1A6NKN8 68 aa8.15□□□□□ -1.1
H3F3B-213ENST00000593254 TSTD3H0UI37 97 aa8.15□□□□□ -1.1
H3F3B-213ENST00000593254 K7EMI3 77 aa8.15□□□□□ -1.1
H3F3B-213ENST00000593254 NUPR1O60356 82 aa8.15□□□□□ -1.1
H3F3B-213ENST00000593254 TLX1NBP0CAT3 122 aa8.15□□□□□ -1.1
H3F3B-213ENST00000593254 UBE2D1P51668 147 aa8.15□□□□□ -1.1
H3F3B-213ENST00000593254 SRSF9Q13242 221 aaKnown RBP eCLIP8.15□□□□□ -1.1
H3F3B-213ENST00000593254 KIAA0087Q14695 138 aa8.15□□□□□ -1.1
H3F3B-213ENST00000593254 ORMDL2Q53FV1 153 aa8.15□□□□□ -1.1
H3F3B-213ENST00000593254 LINC00173Q6ZV60 143 aa8.15□□□□□ -1.1
H3F3B-213ENST00000593254 NPSP0C0P6 89 aa8.14□□□□□ -1.11
H3F3B-213ENST00000593254 UNQ6190/PRO20217Q6UXQ8 127 aa8.14□□□□□ -1.11
H3F3B-213ENST00000593254 AMELXQ99217 191 aa8.14□□□□□ -1.11
H3F3B-213ENST00000593254 NXT2Q9NPJ8 142 aaKnown RBP8.14□□□□□ -1.11
H3F3B-213ENST00000593254 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
H3F3B-213ENST00000593254 IGIPA6NJ69 53 aa8.13□□□□□ -1.11
H3F3B-213ENST00000593254 KIAA1644Q3SXP7 199 aa8.13□□□□□ -1.11
H3F3B-213ENST00000593254 Q6ZN92 141 aa8.13□□□□□ -1.11
H3F3B-213ENST00000593254 LINC01561Q8N1V8 128 aa8.13□□□□□ -1.11
H3F3B-213ENST00000593254 C2orf88Q9BSF0 95 aa8.13□□□□□ -1.11
H3F3B-213ENST00000593254 HSBP1O75506 76 aa8.12□□□□□ -1.11
H3F3B-213ENST00000593254 ZC2HC1BQ5TFG8 222 aa8.12□□□□□ -1.11
H3F3B-213ENST00000593254 REG3GQ6UW15 175 aa8.12□□□□□ -1.11
H3F3B-213ENST00000593254 PHF5AQ7RTV0 110 aaKnown RBP8.12□□□□□ -1.11
H3F3B-213ENST00000593254 KRTAP19-1Q8IUB9 90 aa8.12□□□□□ -1.11
H3F3B-213ENST00000593254 VCX2Q9H322 139 aa8.12□□□□□ -1.11
H3F3B-213ENST00000593254 PSORS1C2Q9UIG4 136 aa8.12□□□□□ -1.11
H3F3B-213ENST00000593254 TRBV30A0A0K0K1B3 111 aa8.11□□□□□ -1.11
H3F3B-213ENST00000593254 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
H3F3B-213ENST00000593254 FAM19A3Q7Z5A8 133 aa8.11□□□□□ -1.11
H3F3B-213ENST00000593254 C2orf82Q6UX34 121 aa8.1□□□□□ -1.11
H3F3B-213ENST00000593254 FAM168BA1KXE4 195 aa8.09□□□□□ -1.11
H3F3B-213ENST00000593254 LINC00587B1AMM8 73 aa8.09□□□□□ -1.11
H3F3B-213ENST00000593254 SCGB1D1O95968 90 aa8.09□□□□□ -1.11
H3F3B-213ENST00000593254 LINC00614P0C842 121 aa8.09□□□□□ -1.11
H3F3B-213ENST00000593254 G0S2P27469 103 aa8.09□□□□□ -1.11
H3F3B-213ENST00000593254 CTAG1AP78358 180 aa8.09□□□□□ -1.11
H3F3B-213ENST00000593254 GAGE2EQ4V326 116 aa8.09□□□□□ -1.11
H3F3B-213ENST00000593254 TIMM17AQ99595 171 aa8.09□□□□□ -1.11
H3F3B-213ENST00000593254 KRTAP9-9Q9BYP9 154 aa8.09□□□□□ -1.11
H3F3B-213ENST00000593254 KRTAP9-4Q9BYQ2 154 aa8.09□□□□□ -1.11
H3F3B-213ENST00000593254 GAGE2DQ9UEU5 116 aa8.09□□□□□ -1.11
H3F3B-213ENST00000593254 NDUFC2-KCTD14E9PQ53 114 aa8.08□□□□□ -1.12
H3F3B-213ENST00000593254 DDTP30046 118 aa8.08□□□□□ -1.12
H3F3B-213ENST00000593254 PMCHL1Q16048 86 aa8.08□□□□□ -1.12
H3F3B-213ENST00000593254 PAPPA-AS1Q5QFB9 102 aa8.08□□□□□ -1.12
H3F3B-213ENST00000593254 TOMM6Q96B49 74 aa8.08□□□□□ -1.12
H3F3B-213ENST00000593254 URB1-AS1Q96HZ7 61 aa8.08□□□□□ -1.12
H3F3B-213ENST00000593254 HERVK_113P63121 156 aa8.07□□□□□ -1.12
H3F3B-213ENST00000593254 SEC11AP67812 179 aa8.07□□□□□ -1.12
H3F3B-213ENST00000593254 C1orf137Q5JT78 98 aa8.07□□□□□ -1.12
H3F3B-213ENST00000593254 FAM19A5Q7Z5A7 132 aaPredicted RBP8.07□□□□□ -1.12
H3F3B-213ENST00000593254 KRTAP7-1Q8IUC3 87 aa8.07□□□□□ -1.12
H3F3B-213ENST00000593254 C20orf202A1L168 122 aa8.06□□□□□ -1.12
H3F3B-213ENST00000593254 PRSS2P07478 247 aa8.06□□□□□ -1.12
H3F3B-213ENST00000593254 LBHQ53QV2 105 aaPredicted RBP8.06□□□□□ -1.12
H3F3B-213ENST00000593254 ERASQ7Z444 233 aa8.06□□□□□ -1.12
H3F3B-213ENST00000593254 KRTAP11-1Q8IUC1 163 aa8.06□□□□□ -1.12
H3F3B-213ENST00000593254 Q8IZM0 81 aa8.06□□□□□ -1.12
H3F3B-213ENST00000593254 CDKN2A-AS1Q9UH64 79 aa8.06□□□□□ -1.12
H3F3B-213ENST00000593254 LINC01546A6NGU7 62 aa8.05□□□□□ -1.12
H3F3B-213ENST00000593254 C3orf79P0CE67 100 aa8.05□□□□□ -1.12
H3F3B-213ENST00000593254 C9orf129Q5T035 196 aaKnown RBP8.05□□□□□ -1.12
H3F3B-213ENST00000593254 TOMM7Q9P0U1 55 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms