RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 MALP21145 153 aa8.98□□□□□ -0.97
VMP1-217ENST00000593168 IGKV2D-24A0A075B6R9 120 aa8.97□□□□□ -0.97
VMP1-217ENST00000593168 SFTA2Q6UW10 78 aa8.97□□□□□ -0.97
VMP1-217ENST00000593168 Q8IZM0 81 aa8.97□□□□□ -0.97
VMP1-217ENST00000593168 CTAG1AP78358 180 aa8.96□□□□□ -0.98
VMP1-217ENST00000593168 TTC32Q5I0X7 151 aa8.96□□□□□ -0.98
VMP1-217ENST00000593168 SCGB1D4Q6XE38 83 aa8.96□□□□□ -0.98
VMP1-217ENST00000593168 ORAOV1Q8WV07 137 aa8.96□□□□□ -0.98
VMP1-217ENST00000593168 Q9HAA7 133 aa8.96□□□□□ -0.98
VMP1-217ENST00000593168 TOMM7Q9P0U1 55 aa8.96□□□□□ -0.98
VMP1-217ENST00000593168 COX11Q9Y6N1 276 aa8.96□□□□□ -0.98
VMP1-217ENST00000593168 A0A0J9YXY3 114 aa8.95□□□□□ -0.98
VMP1-217ENST00000593168 NBDYA0A0U1RRE5 68 aa8.95□□□□□ -0.98
VMP1-217ENST00000593168 LINC00587B1AMM8 73 aa8.95□□□□□ -0.98
VMP1-217ENST00000593168 PRSS2P07478 247 aa8.95□□□□□ -0.98
VMP1-217ENST00000593168 HERV-K104P63124 156 aa8.95□□□□□ -0.98
VMP1-217ENST00000593168 KIAA0087Q14695 138 aa8.95□□□□□ -0.98
VMP1-217ENST00000593168 C6orf226Q5I0X4 101 aa8.95□□□□□ -0.98
VMP1-217ENST00000593168 LINC00336Q6ZUF6 198 aa8.95□□□□□ -0.98
VMP1-217ENST00000593168 ZNF625Q96I27 306 aaPredicted RBP8.95□□□□□ -0.98
VMP1-217ENST00000593168 TM2D2Q9BX73 214 aa8.94□□□□□ -0.98
VMP1-217ENST00000593168 KRTAP4-5Q9BYR2 181 aa8.94□□□□□ -0.98
VMP1-217ENST00000593168 KRTAP1-5Q9BYS1 174 aa8.94□□□□□ -0.98
VMP1-217ENST00000593168 CXCL5P42830 114 aa8.93□□□□□ -0.98
VMP1-217ENST00000593168 TAL2Q16559 108 aa8.93□□□□□ -0.98
VMP1-217ENST00000593168 CFAP161Q6P656 301 aa8.93□□□□□ -0.98
VMP1-217ENST00000593168 TIMM17BO60830 172 aa8.92□□□□□ -0.98
VMP1-217ENST00000593168 HSD52Q0P140 79 aa8.92□□□□□ -0.98
VMP1-217ENST00000593168 SPANXB1Q9NS25 103 aaPredicted RBP8.92□□□□□ -0.98
VMP1-217ENST00000593168 CKS1BP61024 79 aa8.91□□□□□ -0.98
VMP1-217ENST00000593168 SPAG11BQ08648 103 aa8.91□□□□□ -0.98
VMP1-217ENST00000593168 CIRBPQ14011 172 aaKnown RBP8.91□□□□□ -0.98
VMP1-217ENST00000593168 TMEM238C9JI98 176 aa8.9□□□□□ -0.98
VMP1-217ENST00000593168 RTL8CO15255 209 aa8.9□□□□□ -0.98
VMP1-217ENST00000593168 C15orf56Q8N910 161 aa8.9□□□□□ -0.98
VMP1-217ENST00000593168 HSPG2P98160 4391 aa8.89□□□□□ -0.99
VMP1-217ENST00000593168 F8WDY8 70 aa8.89□□□□□ -0.99
VMP1-217ENST00000593168 ZNF561-AS1K7EIQ3 104 aa8.89□□□□□ -0.99
VMP1-217ENST00000593168 M0R143 59 aa8.89□□□□□ -0.99
VMP1-217ENST00000593168 SRSF9Q13242 221 aaKnown RBP eCLIP8.89□□□□□ -0.99
VMP1-217ENST00000593168 Q6ZVH6 145 aa8.89□□□□□ -0.99
VMP1-217ENST00000593168 NTN5Q8WTR8 489 aaPredicted RBP8.89□□□□□ -0.99
VMP1-217ENST00000593168 HIST1H4GQ99525 98 aa8.89□□□□□ -0.99
VMP1-217ENST00000593168 LITAFQ99732 161 aa8.89□□□□□ -0.99
VMP1-217ENST00000593168 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
VMP1-217ENST00000593168 C2orf82Q6UX34 121 aa8.88□□□□□ -0.99
VMP1-217ENST00000593168 C2orf48Q96LS8 159 aa8.88□□□□□ -0.99
VMP1-217ENST00000593168 HINT1P49773 126 aaPredicted RBP8.87□□□□□ -0.99
VMP1-217ENST00000593168 MEIG1Q5JSS6 88 aa8.87□□□□□ -0.99
VMP1-217ENST00000593168 BVES-AS1Q5T3Y7 98 aa8.87□□□□□ -0.99
VMP1-217ENST00000593168 Q6ZR54 194 aa8.87□□□□□ -0.99
VMP1-217ENST00000593168 CEND1Q8N111 149 aa8.87□□□□□ -0.99
VMP1-217ENST00000593168 SPANXDQ9BXN6 97 aa8.87□□□□□ -0.99
VMP1-217ENST00000593168 SNHG12Q9BXW3 62 aa8.87□□□□□ -0.99
VMP1-217ENST00000593168 SPANXCQ9NY87 97 aa8.87□□□□□ -0.99
VMP1-217ENST00000593168 USP17L23D6RBM5 183 aa8.86□□□□□ -0.99
VMP1-217ENST00000593168 M0R2N4 97 aa8.86□□□□□ -0.99
VMP1-217ENST00000593168 HIGD2BQ4VC39 106 aa8.86□□□□□ -0.99
VMP1-217ENST00000593168 ADAMTSL4-AS1Q5T5F5 129 aa8.86□□□□□ -0.99
VMP1-217ENST00000593168 C6orf223Q8N319 242 aa8.86□□□□□ -0.99
VMP1-217ENST00000593168 LINC00526Q96FQ7 95 aa8.86□□□□□ -0.99
VMP1-217ENST00000593168 SMIM13P0DJ93 91 aa8.85□□□□□ -0.99
VMP1-217ENST00000593168 GCSHP23434 173 aa8.85□□□□□ -0.99
VMP1-217ENST00000593168 PTTG1IPP53801 180 aa8.85□□□□□ -0.99
VMP1-217ENST00000593168 UNQ6190/PRO20217Q6UXQ8 127 aa8.85□□□□□ -0.99
VMP1-217ENST00000593168 ERG28Q9UKR5 140 aa8.85□□□□□ -0.99
VMP1-217ENST00000593168 PSCAO43653 123 aa8.84□□□□□ -0.99
VMP1-217ENST00000593168 IFITM1P13164 125 aa8.84□□□□□ -0.99
VMP1-217ENST00000593168 COX17Q14061 63 aa8.84□□□□□ -0.99
VMP1-217ENST00000593168 C10orf25Q5T742 122 aa8.84□□□□□ -0.99
VMP1-217ENST00000593168 Q6ZRN7 208 aaPredicted RBP8.84□□□□□ -0.99
VMP1-217ENST00000593168 CAMK2N2Q96S95 79 aa8.84□□□□□ -0.99
VMP1-217ENST00000593168 TRBV30A0A0K0K1B3 111 aa8.83□□□□□ -1
VMP1-217ENST00000593168 EREGO14944 169 aa8.83□□□□□ -1
VMP1-217ENST00000593168 LINC00158P58513 81 aa8.83□□□□□ -1
VMP1-217ENST00000593168 MUSTN1Q8IVN3 82 aa8.83□□□□□ -1
VMP1-217ENST00000593168 PPDPFQ9H3Y8 114 aa8.83□□□□□ -1
VMP1-217ENST00000593168 A0A0U1RRA0 63 aa8.82□□□□□ -1
VMP1-217ENST00000593168 FXYD2P54710 66 aa8.82□□□□□ -1
VMP1-217ENST00000593168 SYCNQ0VAF6 134 aa8.82□□□□□ -1
VMP1-217ENST00000593168 BATFQ16520 125 aa8.82□□□□□ -1
VMP1-217ENST00000593168 COPS9Q8WXC6 57 aa8.82□□□□□ -1
VMP1-217ENST00000593168 C6orf48Q9UBA6 75 aa8.82□□□□□ -1
VMP1-217ENST00000593168 LRP1BQ9NZR2 4599 aa8.81□□□□□ -1
VMP1-217ENST00000593168 TMEM238LA0A1B0GVL6 79 aa8.81□□□□□ -1
VMP1-217ENST00000593168 A6NJY4 79 aa8.81□□□□□ -1
VMP1-217ENST00000593168 PFN2P35080 140 aa8.81□□□□□ -1
VMP1-217ENST00000593168 RPL24P83731 157 aaKnown RBP8.81□□□□□ -1
VMP1-217ENST00000593168 RNF151Q2KHN1 245 aa8.81□□□□□ -1
VMP1-217ENST00000593168 C14orf177Q52M58 125 aa8.81□□□□□ -1
VMP1-217ENST00000593168 MIR7-3HGQ8N6C7 128 aa8.81□□□□□ -1
VMP1-217ENST00000593168 A6NDN8 102 aa8.8□□□□□ -1
VMP1-217ENST00000593168 LBHQ53QV2 105 aaPredicted RBP8.8□□□□□ -1
VMP1-217ENST00000593168 Q6ZRU5 148 aa8.8□□□□□ -1
VMP1-217ENST00000593168 DAND5Q8N907 189 aa8.8□□□□□ -1
VMP1-217ENST00000593168 LINC00308Q8TCZ7 52 aa8.8□□□□□ -1
VMP1-217ENST00000593168 HERC1Q15751 4861 aa8.79□□□□□ -1
VMP1-217ENST00000593168 LRCOL1A6NCL2 159 aa8.79□□□□□ -1
VMP1-217ENST00000593168 LECT2O14960 151 aa8.79□□□□□ -1
VMP1-217ENST00000593168 WFDC2Q14508 124 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms