RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 XCL1P47992 114 aa12.46□□□□□ -0.41
SPC24-206ENST00000592540 Q8N814 137 aa12.46□□□□□ -0.41
SPC24-206ENST00000592540 CSNK1G2-AS1Q8NCQ2 148 aa12.46□□□□□ -0.41
SPC24-206ENST00000592540 KIR2DL5BQ8NHK3 375 aa12.46□□□□□ -0.41
SPC24-206ENST00000592540 DPH3Q96FX2 82 aa12.46□□□□□ -0.41
SPC24-206ENST00000592540 MYO18BQ8IUG5 2567 aa12.46□□□□□ -0.42
SPC24-206ENST00000592540 EPG5Q9HCE0 2579 aa12.46□□□□□ -0.42
SPC24-206ENST00000592540 CMC4P56277 68 aaPredicted RBP12.45□□□□□ -0.42
SPC24-206ENST00000592540 S100A7L2Q5SY68 101 aa12.45□□□□□ -0.42
SPC24-206ENST00000592540 Q8IZM0 81 aa12.45□□□□□ -0.42
SPC24-206ENST00000592540 PRR3P79522 188 aaKnown RBP12.45□□□□□ -0.42
SPC24-206ENST00000592540 SMIM9A6NGZ8 99 aa12.44□□□□□ -0.42
SPC24-206ENST00000592540 TMEM256-PLSCR3K7ERE1 68 aa12.44□□□□□ -0.42
SPC24-206ENST00000592540 HILS1P60008 231 aa12.44□□□□□ -0.42
SPC24-206ENST00000592540 ACACBO00763 2458 aa12.43□□□□□ -0.42
SPC24-206ENST00000592540 ATP5EP2Q5VTU8 51 aa12.43□□□□□ -0.42
SPC24-206ENST00000592540 IGSF10Q6WRI0 2623 aa12.42□□□□□ -0.42
SPC24-206ENST00000592540 LRRK2Q5S007 2527 aa12.42□□□□□ -0.42
SPC24-206ENST00000592540 WFDC9Q8NEX5 89 aa12.42□□□□□ -0.42
SPC24-206ENST00000592540 C19orf73Q9NVV2 129 aa12.42□□□□□ -0.42
SPC24-206ENST00000592540 NIPBLQ6KC79 2804 aaeCLIP12.42□□□□□ -0.42
SPC24-206ENST00000592540 C5orf47Q569G3 176 aa12.42□□□□□ -0.42
SPC24-206ENST00000592540 LYPD5Q6UWN5 251 aa12.4□□□□□ -0.42
SPC24-206ENST00000592540 NF1P21359 2839 aa12.4□□□□□ -0.42
SPC24-206ENST00000592540 CLPSL2Q6UWE3 100 aa12.4□□□□□ -0.42
SPC24-206ENST00000592540 ZNF469Q96JG9 3925 aaPredicted RBP12.4□□□□□ -0.42
SPC24-206ENST00000592540 FAM208BQ5VWN6 2430 aa12.4□□□□□ -0.43
SPC24-206ENST00000592540 A0A1B0GUV1 79 aa12.39□□□□□ -0.43
SPC24-206ENST00000592540 NDUFC2O95298 119 aa12.39□□□□□ -0.43
SPC24-206ENST00000592540 GHRHP01286 108 aa12.39□□□□□ -0.43
SPC24-206ENST00000592540 KRTAP10-9P60411 292 aa12.39□□□□□ -0.43
SPC24-206ENST00000592540 DSCR8Q96T75 97 aa12.39□□□□□ -0.43
SPC24-206ENST00000592540 PTPN13Q12923 2485 aa12.39□□□□□ -0.43
SPC24-206ENST00000592540 DNAJC9-AS1A6NH13 148 aa12.38□□□□□ -0.43
SPC24-206ENST00000592540 DEFB130BP0DP73 79 aa12.38□□□□□ -0.43
SPC24-206ENST00000592540 DEFB130AP0DP74 79 aa12.38□□□□□ -0.43
SPC24-206ENST00000592540 ENHOQ6UWT2 76 aa12.38□□□□□ -0.43
SPC24-206ENST00000592540 FAM19A1Q7Z5A9 133 aa12.38□□□□□ -0.43
SPC24-206ENST00000592540 TRAV23DV6A0A075B6W5 121 aa12.38□□□□□ -0.43
SPC24-206ENST00000592540 GYPEP15421 78 aa12.38□□□□□ -0.43
SPC24-206ENST00000592540 OXTP01178 125 aa12.37□□□□□ -0.43
SPC24-206ENST00000592540 NAV2Q8IVL1 2488 aa12.37□□□□□ -0.43
SPC24-206ENST00000592540 IGLV1-51P01701 117 aa12.36□□□□□ -0.43
SPC24-206ENST00000592540 KIAA0087Q14695 138 aa12.36□□□□□ -0.43
SPC24-206ENST00000592540 COX17Q14061 63 aa12.36□□□□□ -0.43
SPC24-206ENST00000592540 DEFB113Q30KQ7 82 aa12.36□□□□□ -0.43
SPC24-206ENST00000592540 UBL5Q9BZL1 73 aa12.36□□□□□ -0.43
SPC24-206ENST00000592540 SONP18583 2426 aaKnown RBP12.35□□□□□ -0.43
SPC24-206ENST00000592540 RNASE1P07998 156 aaKnown RBP12.35□□□□□ -0.43
SPC24-206ENST00000592540 ABCA12Q86UK0 2595 aa12.35□□□□□ -0.43
SPC24-206ENST00000592540 TRBV10-3A0A0K0K1G6 114 aa12.34□□□□□ -0.43
SPC24-206ENST00000592540 C6orf99Q4VX62 202 aa12.34□□□□□ -0.43
SPC24-206ENST00000592540 ESM1Q9NQ30 184 aa12.33□□□□□ -0.44
SPC24-206ENST00000592540 C9orf116Q5BN46 136 aaPredicted RBP12.32□□□□□ -0.44
SPC24-206ENST00000592540 SETD2Q9BYW2 2564 aaPredicted RBP12.32□□□□□ -0.44
SPC24-206ENST00000592540 LINC00612Q8N6U2 182 aa12.32□□□□□ -0.44
SPC24-206ENST00000592540 Q8NDZ9 215 aa12.32□□□□□ -0.44
SPC24-206ENST00000592540 CACNA1AO00555 2505 aa12.31□□□□□ -0.44
SPC24-206ENST00000592540 A0A096LPF7 62 aa12.31□□□□□ -0.44
SPC24-206ENST00000592540 CD164L2Q6UWJ8 174 aa12.31□□□□□ -0.44
SPC24-206ENST00000592540 LINC00575Q6W349 94 aa12.31□□□□□ -0.44
SPC24-206ENST00000592540 IGHV4-28A0A0C4DH34 117 aa12.31□□□□□ -0.44
SPC24-206ENST00000592540 LINC00269Q8N2A0 174 aa12.31□□□□□ -0.44
SPC24-206ENST00000592540 NDUFC2-KCTD14E9PQ53 114 aa12.3□□□□□ -0.44
SPC24-206ENST00000592540 Q6ZQT0 140 aa12.3□□□□□ -0.44
SPC24-206ENST00000592540 RBM3P98179 157 aaKnown RBP12.29□□□□□ -0.44
SPC24-206ENST00000592540 CHCHD10Q8WYQ3 142 aaPredicted RBP12.29□□□□□ -0.44
SPC24-206ENST00000592540 PIEZO1Q92508 2521 aa12.29□□□□□ -0.44
SPC24-206ENST00000592540 BBC3Q96PG8 261 aaPredicted RBP12.28□□□□□ -0.44
SPC24-206ENST00000592540 FN1P02751 2386 aaKnown RBP12.28□□□□□ -0.44
SPC24-206ENST00000592540 PRO0255Q9UI72 69 aa12.28□□□□□ -0.44
SPC24-206ENST00000592540 IGLV10-54A0A075B6I4 117 aa12.27□□□□□ -0.44
SPC24-206ENST00000592540 KRTAP1-3Q8IUG1 177 aa12.27□□□□□ -0.44
SPC24-206ENST00000592540 C20orf197Q8N268 126 aa12.27□□□□□ -0.44
SPC24-206ENST00000592540 LOC110117498A0A087WWA1 95 aa12.27□□□□□ -0.45
SPC24-206ENST00000592540 ZNF561-AS1K7EIQ3 104 aa12.27□□□□□ -0.45
SPC24-206ENST00000592540 LINC01006Q8NI28 216 aa12.27□□□□□ -0.45
SPC24-206ENST00000592540 ITPR3Q14573 2671 aa12.25□□□□□ -0.45
SPC24-206ENST00000592540 C6orf223Q8N319 242 aa12.25□□□□□ -0.45
SPC24-206ENST00000592540 Q8N3U1 123 aa12.25□□□□□ -0.45
SPC24-206ENST00000592540 LAMTOR3Q9UHA4 124 aa12.25□□□□□ -0.45
SPC24-206ENST00000592540 M0R2N4 97 aa12.24□□□□□ -0.45
SPC24-206ENST00000592540 C4orf26Q17RF5 130 aa12.24□□□□□ -0.45
SPC24-206ENST00000592540 Q5XG85 94 aa12.24□□□□□ -0.45
SPC24-206ENST00000592540 REG3AQ06141 175 aa12.23□□□□□ -0.45
SPC24-206ENST00000592540 ANGP03950 147 aaKnown RBP12.23□□□□□ -0.45
SPC24-206ENST00000592540 LINC01547P58512 204 aaPredicted RBP12.22□□□□□ -0.45
SPC24-206ENST00000592540 BCE1O60756 84 aa12.22□□□□□ -0.45
SPC24-206ENST00000592540 X6R8D5 127 aa12.22□□□□□ -0.45
SPC24-206ENST00000592540 TRAV7A0A075B6U4 112 aa12.21□□□□□ -0.45
SPC24-206ENST00000592540 PRB1P04280 392 aa12.21□□□□□ -0.46
SPC24-206ENST00000592540 C10orf25Q5T742 122 aa12.21□□□□□ -0.46
SPC24-206ENST00000592540 Q6ZVQ6 151 aa12.21□□□□□ -0.46
SPC24-206ENST00000592540 C16orf95Q9H693 158 aa12.21□□□□□ -0.46
SPC24-206ENST00000592540 ZNF462Q96JM2 2506 aa12.2□□□□□ -0.46
SPC24-206ENST00000592540 FAM236DA0A1B0GTK5 79 aa12.2□□□□□ -0.46
SPC24-206ENST00000592540 FAM236CP0DP71 79 aa12.2□□□□□ -0.46
SPC24-206ENST00000592540 HAMPP81172 84 aa12.2□□□□□ -0.46
SPC24-206ENST00000592540 UNQ6190/PRO20217Q6UXQ8 127 aa12.2□□□□□ -0.46
SPC24-206ENST00000592540 LINC00482Q8N8I6 264 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms