RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 LINC00469Q8N7U9 141 aa9.39□□□□□ -0.91
ERCC1-213ENST00000592023 LINC01549A6NIU2 74 aa9.38□□□□□ -0.91
ERCC1-213ENST00000592023 NDUFC2-KCTD14E9PQ53 114 aa9.38□□□□□ -0.91
ERCC1-213ENST00000592023 NDUFA5Q16718 116 aa9.38□□□□□ -0.91
ERCC1-213ENST00000592023 SPINK6Q6UWN8 80 aa9.38□□□□□ -0.91
ERCC1-213ENST00000592023 PSORS1C2Q9UIG4 136 aa9.38□□□□□ -0.91
ERCC1-213ENST00000592023 SNAPINO95295 136 aa9.37□□□□□ -0.91
ERCC1-213ENST00000592023 C6orf226Q5I0X4 101 aa9.37□□□□□ -0.91
ERCC1-213ENST00000592023 SVBPQ8N300 66 aa9.37□□□□□ -0.91
ERCC1-213ENST00000592023 TRAPPC1Q9Y5R8 145 aa9.37□□□□□ -0.91
ERCC1-213ENST00000592023 SMIM1B2RUZ4 78 aa9.36□□□□□ -0.91
ERCC1-213ENST00000592023 M0QXV9 152 aa9.36□□□□□ -0.91
ERCC1-213ENST00000592023 C1orf137Q5JT78 98 aa9.36□□□□□ -0.91
ERCC1-213ENST00000592023 TINCRA0A1B0GVN0 87 aa9.35□□□□□ -0.91
ERCC1-213ENST00000592023 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
ERCC1-213ENST00000592023 C9orf129Q5T035 196 aaKnown RBP9.35□□□□□ -0.91
ERCC1-213ENST00000592023 KRTAP7-1Q8IUC3 87 aa9.35□□□□□ -0.91
ERCC1-213ENST00000592023 C18orf32Q8TCD1 76 aa9.35□□□□□ -0.91
ERCC1-213ENST00000592023 CST9LQ9H4G1 147 aa9.35□□□□□ -0.91
ERCC1-213ENST00000592023 PMVKQ15126 192 aa9.34□□□□□ -0.91
ERCC1-213ENST00000592023 REG3GQ6UW15 175 aa9.34□□□□□ -0.91
ERCC1-213ENST00000592023 KRTAP11-1Q8IUC1 163 aa9.34□□□□□ -0.91
ERCC1-213ENST00000592023 URB1-AS1Q96HZ7 61 aa9.34□□□□□ -0.91
ERCC1-213ENST00000592023 LINC01600Q96MT4 127 aa9.34□□□□□ -0.91
ERCC1-213ENST00000592023 PLA2G2DQ9UNK4 145 aa9.34□□□□□ -0.91
ERCC1-213ENST00000592023 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
ERCC1-213ENST00000592023 A0A096LNJ9 63 aa9.33□□□□□ -0.92
ERCC1-213ENST00000592023 F8VRH5 84 aa9.33□□□□□ -0.92
ERCC1-213ENST00000592023 SPINK8P0C7L1 97 aa9.33□□□□□ -0.92
ERCC1-213ENST00000592023 CXCL5P42830 114 aa9.33□□□□□ -0.92
ERCC1-213ENST00000592023 UBE2BP63146 152 aa9.32□□□□□ -0.92
ERCC1-213ENST00000592023 PMCHL1Q16048 86 aa9.32□□□□□ -0.92
ERCC1-213ENST00000592023 PDZD11Q5EBL8 140 aa9.32□□□□□ -0.92
ERCC1-213ENST00000592023 COX7B2Q8TF08 81 aa9.32□□□□□ -0.92
ERCC1-213ENST00000592023 XAGE1AQ9HD64 81 aa9.32□□□□□ -0.92
ERCC1-213ENST00000592023 HBDP02042 147 aa9.31□□□□□ -0.92
ERCC1-213ENST00000592023 LINC00614P0C842 121 aa9.31□□□□□ -0.92
ERCC1-213ENST00000592023 NDUFA6P56556 154 aa9.31□□□□□ -0.92
ERCC1-213ENST00000592023 HMCN2Q8NDA2 5059 aa9.31□□□□□ -0.92
ERCC1-213ENST00000592023 IGLV7-43P04211 117 aa9.29□□□□□ -0.92
ERCC1-213ENST00000592023 H3BRM9 83 aa9.28□□□□□ -0.92
ERCC1-213ENST00000592023 IGLC3P0DOY3 106 aa9.28□□□□□ -0.92
ERCC1-213ENST00000592023 ODF1Q14990 250 aa9.28□□□□□ -0.92
ERCC1-213ENST00000592023 YPEL4Q96NS1 127 aa9.28□□□□□ -0.92
ERCC1-213ENST00000592023 RAB5BP61020 215 aa9.27□□□□□ -0.93
ERCC1-213ENST00000592023 ZNF22P17026 224 aaPredicted RBP9.26□□□□□ -0.93
ERCC1-213ENST00000592023 CBLN2Q8IUK8 224 aa9.26□□□□□ -0.93
ERCC1-213ENST00000592023 TNXBP22105 4242 aa9.25□□□□□ -0.93
ERCC1-213ENST00000592023 ATP5LO75964 103 aa9.25□□□□□ -0.93
ERCC1-213ENST00000592023 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
ERCC1-213ENST00000592023 C22orf24Q9Y442 160 aa9.25□□□□□ -0.93
ERCC1-213ENST00000592023 KRTAP10-8P60410 259 aa9.24□□□□□ -0.93
ERCC1-213ENST00000592023 C11orf86A6NJI1 115 aa9.23□□□□□ -0.93
ERCC1-213ENST00000592023 H0Y9J4 135 aa9.23□□□□□ -0.93
ERCC1-213ENST00000592023 BAGE3Q86Y29 109 aa9.23□□□□□ -0.93
ERCC1-213ENST00000592023 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
ERCC1-213ENST00000592023 LBHQ53QV2 105 aaPredicted RBP9.22□□□□□ -0.93
ERCC1-213ENST00000592023 TMEM170BQ5T4T1 132 aa9.21□□□□□ -0.94
ERCC1-213ENST00000592023 MRPL55Q7Z7F7 128 aaKnown RBP9.21□□□□□ -0.94
ERCC1-213ENST00000592023 CHCHD1Q96BP2 118 aaKnown RBP9.21□□□□□ -0.94
ERCC1-213ENST00000592023 PFN2P35080 140 aa9.2□□□□□ -0.94
ERCC1-213ENST00000592023 TP73-AS1Q9UF72 201 aa9.2□□□□□ -0.94
ERCC1-213ENST00000592023 CHTOPQ9Y3Y2 248 aaKnown RBP9.2□□□□□ -0.94
ERCC1-213ENST00000592023 GAGE10A6NGK3 116 aa9.18□□□□□ -0.94
ERCC1-213ENST00000592023 NUPR1O60356 82 aa9.18□□□□□ -0.94
ERCC1-213ENST00000592023 PRR26Q8N8Z3 221 aa9.18□□□□□ -0.94
ERCC1-213ENST00000592023 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
ERCC1-213ENST00000592023 HSBP1O75506 76 aa9.17□□□□□ -0.94
ERCC1-213ENST00000592023 SLC7A5P1Q8MH63 180 aa9.17□□□□□ -0.94
ERCC1-213ENST00000592023 NKAPP1Q8N9T2 125 aa9.17□□□□□ -0.94
ERCC1-213ENST00000592023 IFI27L1Q96BM0 104 aa9.17□□□□□ -0.94
ERCC1-213ENST00000592023 ZNF625Q96I27 306 aaPredicted RBP9.17□□□□□ -0.94
ERCC1-213ENST00000592023 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
ERCC1-213ENST00000592023 TRGC2P03986 189 aa9.16□□□□□ -0.94
ERCC1-213ENST00000592023 FAM19A2Q8N3H0 131 aa9.16□□□□□ -0.94
ERCC1-213ENST00000592023 LINC00167Q96N53 147 aa9.16□□□□□ -0.94
ERCC1-213ENST00000592023 IGLV5-37A0A075B6J1 123 aa9.15□□□□□ -0.94
ERCC1-213ENST00000592023 TRAV12-1A0A0B4J245 112 aa9.15□□□□□ -0.94
ERCC1-213ENST00000592023 ZNF861PO60384 105 aa9.15□□□□□ -0.94
ERCC1-213ENST00000592023 KRTAP1-4P0C5Y4 121 aa9.15□□□□□ -0.94
ERCC1-213ENST00000592023 SCO1O75880 301 aa9.14□□□□□ -0.95
ERCC1-213ENST00000592023 SND1-IT1Q9HBX3 110 aa9.14□□□□□ -0.95
ERCC1-213ENST00000592023 TMEM223A0PJW6 202 aa9.13□□□□□ -0.95
ERCC1-213ENST00000592023 H0Y8G0 127 aa9.13□□□□□ -0.95
ERCC1-213ENST00000592023 BCE1O60756 84 aa9.13□□□□□ -0.95
ERCC1-213ENST00000592023 IGLV1-50A0A075B6I6 118 aa9.12□□□□□ -0.95
ERCC1-213ENST00000592023 SERF1AO75920 110 aa9.12□□□□□ -0.95
ERCC1-213ENST00000592023 SFTA2Q6UW10 78 aa9.12□□□□□ -0.95
ERCC1-213ENST00000592023 IGKV2-28A0A075B6P5 120 aa9.11□□□□□ -0.95
ERCC1-213ENST00000592023 IGKV2D-28P01615 120 aa9.11□□□□□ -0.95
ERCC1-213ENST00000592023 VPREB1P12018 145 aa9.11□□□□□ -0.95
ERCC1-213ENST00000592023 RPL28P46779 137 aaKnown RBP9.11□□□□□ -0.95
ERCC1-213ENST00000592023 LINC00310P59036 64 aa9.11□□□□□ -0.95
ERCC1-213ENST00000592023 COX17Q14061 63 aa9.11□□□□□ -0.95
ERCC1-213ENST00000592023 A0A0U1RRA0 63 aa9.09□□□□□ -0.95
ERCC1-213ENST00000592023 LEPROTL1O95214 131 aa9.09□□□□□ -0.95
ERCC1-213ENST00000592023 LINC00158P58513 81 aa9.09□□□□□ -0.95
ERCC1-213ENST00000592023 UBE2AP49459 152 aa9.08□□□□□ -0.96
ERCC1-213ENST00000592023 RPL24P83731 157 aaKnown RBP9.08□□□□□ -0.96
ERCC1-213ENST00000592023 Q8NDZ9 215 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms