RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 DPM2O94777 84 aa6.14□□□□□ -1.43
BRCA1-226ENST00000591534 GAS8-AS1O95177 125 aa6.14□□□□□ -1.43
BRCA1-226ENST00000591534 C3orf79P0CE67 100 aa6.14□□□□□ -1.43
BRCA1-226ENST00000591534 FGF6P10767 208 aa6.14□□□□□ -1.43
BRCA1-226ENST00000591534 RPL37AP61513 92 aaKnown RBP6.14□□□□□ -1.43
BRCA1-226ENST00000591534 LINC01545Q5VT33 79 aa6.14□□□□□ -1.43
BRCA1-226ENST00000591534 DNAH8Q96JB1 4490 aa6.13□□□□□ -1.43
BRCA1-226ENST00000591534 ANGP03950 147 aaKnown RBP6.13□□□□□ -1.43
BRCA1-226ENST00000591534 HERVK_113P63121 156 aa6.13□□□□□ -1.43
BRCA1-226ENST00000591534 MIAQ16674 131 aa6.13□□□□□ -1.43
BRCA1-226ENST00000591534 SFTA2Q6UW10 78 aa6.13□□□□□ -1.43
BRCA1-226ENST00000591534 VAMP8Q9BV40 100 aa6.13□□□□□ -1.43
BRCA1-226ENST00000591534 UBE2D4Q9Y2X8 147 aa6.13□□□□□ -1.43
BRCA1-226ENST00000591534 CHTOPQ9Y3Y2 248 aaKnown RBP6.13□□□□□ -1.43
BRCA1-226ENST00000591534 A0A096LNJ9 63 aa6.12□□□□□ -1.43
BRCA1-226ENST00000591534 TSTD3H0UI37 97 aa6.12□□□□□ -1.43
BRCA1-226ENST00000591534 IGKCP01834 107 aa6.12□□□□□ -1.43
BRCA1-226ENST00000591534 SS18Q15532 418 aa6.12□□□□□ -1.43
BRCA1-226ENST00000591534 ZNF664Q8N3J9 261 aa6.12□□□□□ -1.43
BRCA1-226ENST00000591534 CST9LQ9H4G1 147 aa6.12□□□□□ -1.43
BRCA1-226ENST00000591534 GEMIN7Q9H840 131 aaKnown RBP6.12□□□□□ -1.43
BRCA1-226ENST00000591534 TRAV8-4A0A0B4J246 113 aa6.11□□□□□ -1.43
BRCA1-226ENST00000591534 IFITM10A6NMD0 228 aa6.11□□□□□ -1.43
BRCA1-226ENST00000591534 USP17L23D6RBM5 183 aa6.11□□□□□ -1.43
BRCA1-226ENST00000591534 ENHOQ6UWT2 76 aa6.11□□□□□ -1.43
BRCA1-226ENST00000591534 AMELXQ99217 191 aa6.11□□□□□ -1.43
BRCA1-226ENST00000591534 IGLV4-3A0A075B6K6 122 aa6.1□□□□□ -1.43
BRCA1-226ENST00000591534 TINCRA0A1B0GVN0 87 aa6.1□□□□□ -1.43
BRCA1-226ENST00000591534 H0Y8G0 127 aa6.1□□□□□ -1.43
BRCA1-226ENST00000591534 KRTAP10-4P60372 401 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-226ENST00000591534 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
BRCA1-226ENST00000591534 PMCHL2Q9BQD1 86 aa6.1□□□□□ -1.43
BRCA1-226ENST00000591534 CDC42SE2Q9NRR3 84 aa6.1□□□□□ -1.43
BRCA1-226ENST00000591534 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-226ENST00000591534 IGKV2-29A2NJV5 120 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-226ENST00000591534 RPL39P62891 51 aaKnown RBP6.09□□□□□ -1.43
BRCA1-226ENST00000591534 MPV17L2Q567V2 206 aa6.09□□□□□ -1.43
BRCA1-226ENST00000591534 PYY3Q5JQD4 70 aa6.09□□□□□ -1.43
BRCA1-226ENST00000591534 NTM-AS1Q6ZSK4 140 aa6.09□□□□□ -1.43
BRCA1-226ENST00000591534 FAM19A3Q7Z5A8 133 aa6.09□□□□□ -1.43
BRCA1-226ENST00000591534 LINC01561Q8N1V8 128 aa6.09□□□□□ -1.43
BRCA1-226ENST00000591534 C9orf163Q8N9P6 203 aa6.09□□□□□ -1.43
BRCA1-226ENST00000591534 DPH3Q96FX2 82 aa6.09□□□□□ -1.43
BRCA1-226ENST00000591534 C12orf57Q99622 126 aa6.09□□□□□ -1.43
BRCA1-226ENST00000591534 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-226ENST00000591534 C11orf86A6NJI1 115 aa6.08□□□□□ -1.44
BRCA1-226ENST00000591534 LINC00587B1AMM8 73 aa6.08□□□□□ -1.44
BRCA1-226ENST00000591534 IGLC3P0DOY3 106 aa6.08□□□□□ -1.44
BRCA1-226ENST00000591534 GAGE6Q13070 117 aa6.08□□□□□ -1.44
BRCA1-226ENST00000591534 LINC00518Q8N0U6 118 aa6.08□□□□□ -1.44
BRCA1-226ENST00000591534 APOMO95445 188 aa6.07□□□□□ -1.44
BRCA1-226ENST00000591534 RBX1P62877 108 aa6.07□□□□□ -1.44
BRCA1-226ENST00000591534 Q6ZRU5 148 aa6.07□□□□□ -1.44
BRCA1-226ENST00000591534 BOD1L2Q8IYS8 172 aa6.07□□□□□ -1.44
BRCA1-226ENST00000591534 LINC00269Q8N2A0 174 aa6.07□□□□□ -1.44
BRCA1-226ENST00000591534 PLEKHB2Q96CS7 222 aa6.07□□□□□ -1.44
BRCA1-226ENST00000591534 PRR34Q9NV39 138 aa6.07□□□□□ -1.44
BRCA1-226ENST00000591534 HMCN2Q8NDA2 5059 aa6.06□□□□□ -1.44
BRCA1-226ENST00000591534 IGHV3-64A0A075B6Q5 118 aa6.06□□□□□ -1.44
BRCA1-226ENST00000591534 NMUP48645 174 aa6.06□□□□□ -1.44
BRCA1-226ENST00000591534 TMEM170BQ5T4T1 132 aa6.06□□□□□ -1.44
BRCA1-226ENST00000591534 COPS9Q8WXC6 57 aa6.06□□□□□ -1.44
BRCA1-226ENST00000591534 MRPL35Q9NZE8 188 aaKnown RBP6.06□□□□□ -1.44
BRCA1-226ENST00000591534 hDV102S1A0JD36 115 aa6.05□□□□□ -1.44
BRCA1-226ENST00000591534 UBE2D1P51668 147 aa6.05□□□□□ -1.44
BRCA1-226ENST00000591534 CNBPP62633 177 aaKnown RBP6.05□□□□□ -1.44
BRCA1-226ENST00000591534 REG3AQ06141 175 aa6.05□□□□□ -1.44
BRCA1-226ENST00000591534 SDIM1Q6ZPB5 146 aa6.05□□□□□ -1.44
BRCA1-226ENST00000591534 LINC00469Q8N7U9 141 aa6.05□□□□□ -1.44
BRCA1-226ENST00000591534 UQCR10Q9UDW1 63 aa6.05□□□□□ -1.44
BRCA1-226ENST00000591534 LRP1Q07954 4544 aaKnown RBP6.05□□□□□ -1.44
BRCA1-226ENST00000591534 IGLV5-45A0A087WSX0 123 aa6.04□□□□□ -1.44
BRCA1-226ENST00000591534 TRAV13-1A0A0B4J241 112 aa6.04□□□□□ -1.44
BRCA1-226ENST00000591534 E9PLD3 99 aa6.04□□□□□ -1.44
BRCA1-226ENST00000591534 F8WDY8 70 aa6.04□□□□□ -1.44
BRCA1-226ENST00000591534 DLEU1O43261 78 aa6.04□□□□□ -1.44
BRCA1-226ENST00000591534 SPATA45Q537H7 98 aa6.04□□□□□ -1.44
BRCA1-226ENST00000591534 ZC2HC1BQ5TFG8 222 aa6.04□□□□□ -1.44
BRCA1-226ENST00000591534 CLPSL2Q6UWE3 100 aa6.04□□□□□ -1.44
BRCA1-226ENST00000591534 CD164L2Q6UWJ8 174 aa6.04□□□□□ -1.44
BRCA1-226ENST00000591534 Q6ZUT4 128 aa6.04□□□□□ -1.44
BRCA1-226ENST00000591534 C7orf33Q8WU49 177 aa6.04□□□□□ -1.44
BRCA1-226ENST00000591534 LINC00959A0A1B0GUT2 108 aa6.03□□□□□ -1.44
BRCA1-226ENST00000591534 LGALS3P17931 250 aaKnown RBP6.03□□□□□ -1.44
BRCA1-226ENST00000591534 CXCL5P42830 114 aa6.03□□□□□ -1.44
BRCA1-226ENST00000591534 CIRBPQ14011 172 aaKnown RBP6.03□□□□□ -1.44
BRCA1-226ENST00000591534 SLC25A34Q6PIV7 304 aa6.03□□□□□ -1.44
BRCA1-226ENST00000591534 LINC00173Q6ZV60 143 aa6.03□□□□□ -1.44
BRCA1-226ENST00000591534 PAM16Q9Y3D7 125 aa6.03□□□□□ -1.44
BRCA1-226ENST00000591534 UBR4Q5T4S7 5183 aa6.02□□□□□ -1.45
BRCA1-226ENST00000591534 IGLV10-54A0A075B6I4 117 aa6.02□□□□□ -1.45
BRCA1-226ENST00000591534 COX7A2LO14548 114 aa6.02□□□□□ -1.45
BRCA1-226ENST00000591534 PRSS2P07478 247 aa6.02□□□□□ -1.45
BRCA1-226ENST00000591534 HERV-K104P63124 156 aa6.02□□□□□ -1.45
BRCA1-226ENST00000591534 PKIGQ9Y2B9 76 aa6.02□□□□□ -1.45
BRCA1-226ENST00000591534 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
BRCA1-226ENST00000591534 IGLV4-69A0A075B6H9 119 aa6.01□□□□□ -1.45
BRCA1-226ENST00000591534 A0A087WZ39 114 aa6.01□□□□□ -1.45
BRCA1-226ENST00000591534 IGHV1-58A0A0C4DH39 117 aa6.01□□□□□ -1.45
BRCA1-226ENST00000591534 A0A0J9YXV3 536 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms