RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 DNAL4O96015 105 aa7.62□□□□□ -1.19
VPS4B-206ENST00000591475 CXCL5P42830 114 aa7.62□□□□□ -1.19
VPS4B-206ENST00000591475 TRGV4A0A0C4DH28 118 aa7.61□□□□□ -1.19
VPS4B-206ENST00000591475 PLAC8L1A1L4L8 177 aa7.61□□□□□ -1.19
VPS4B-206ENST00000591475 ATP5G1P05496 136 aa7.61□□□□□ -1.19
VPS4B-206ENST00000591475 SMIM11BQ8TCY0 68 aa7.61□□□□□ -1.19
VPS4B-206ENST00000591475 TMEM126AQ9H061 195 aa7.61□□□□□ -1.19
VPS4B-206ENST00000591475 IGKV3OR2-268A0A0C4DH90 116 aa7.61□□□□□ -1.19
VPS4B-206ENST00000591475 IBA57-AS1B1ANH7 110 aa7.61□□□□□ -1.19
VPS4B-206ENST00000591475 H0YGX0 51 aa7.61□□□□□ -1.19
VPS4B-206ENST00000591475 GIG44P09565 113 aaPredicted RBP7.61□□□□□ -1.19
VPS4B-206ENST00000591475 WNK1Q9H4A3 2382 aa7.6□□□□□ -1.19
VPS4B-206ENST00000591475 CCL18P55774 89 aa7.6□□□□□ -1.19
VPS4B-206ENST00000591475 C5orf38Q86SI9 138 aa7.6□□□□□ -1.19
VPS4B-206ENST00000591475 IGLV4-60A0A075B6I1 120 aa7.59□□□□□ -1.19
VPS4B-206ENST00000591475 A0A087WYN8 130 aa7.59□□□□□ -1.19
VPS4B-206ENST00000591475 TRBV6-8A0A0A6YYG3 113 aa7.59□□□□□ -1.19
VPS4B-206ENST00000591475 IGHV3OR16-9A0A0B4J2B5 98 aa7.59□□□□□ -1.19
VPS4B-206ENST00000591475 FAM110AQ9BQ89 295 aa7.59□□□□□ -1.19
VPS4B-206ENST00000591475 SMIM20Q8N5G0 67 aa7.59□□□□□ -1.19
VPS4B-206ENST00000591475 C3orf56Q8N813 242 aa7.59□□□□□ -1.19
VPS4B-206ENST00000591475 A0A087WZ39 114 aa7.58□□□□□ -1.2
VPS4B-206ENST00000591475 RPL35AP18077 110 aaKnown RBP7.58□□□□□ -1.2
VPS4B-206ENST00000591475 C3orf22Q8N5N4 141 aa7.58□□□□□ -1.2
VPS4B-206ENST00000591475 LINC00482Q8N8I6 264 aa7.58□□□□□ -1.2
VPS4B-206ENST00000591475 UQCRQO14949 82 aa7.57□□□□□ -1.2
VPS4B-206ENST00000591475 FHL2Q14192 279 aa7.57□□□□□ -1.2
VPS4B-206ENST00000591475 VWFP04275 2813 aa7.57□□□□□ -1.2
VPS4B-206ENST00000591475 COL6A5A8TX70 2615 aa7.57□□□□□ -1.2
VPS4B-206ENST00000591475 PFN2P35080 140 aa7.57□□□□□ -1.2
VPS4B-206ENST00000591475 C9orf153Q5TBE3 101 aa7.57□□□□□ -1.2
VPS4B-206ENST00000591475 PAX4O43316 350 aa7.56□□□□□ -1.2
VPS4B-206ENST00000591475 WFDC10AQ9H1F0 79 aa7.56□□□□□ -1.2
VPS4B-206ENST00000591475 LECT2O14960 151 aa7.56□□□□□ -1.2
VPS4B-206ENST00000591475 CSNK1G2-AS1Q8NCQ2 148 aa7.56□□□□□ -1.2
VPS4B-206ENST00000591475 OR13C6PQ8NH95 151 aa7.56□□□□□ -1.2
VPS4B-206ENST00000591475 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
VPS4B-206ENST00000591475 C14orf132Q9NPU4 83 aa7.56□□□□□ -1.2
VPS4B-206ENST00000591475 LINC00959A0A1B0GUT2 108 aa7.55□□□□□ -1.2
VPS4B-206ENST00000591475 IGLV1-51P01701 117 aa7.55□□□□□ -1.2
VPS4B-206ENST00000591475 LINC00526Q96FQ7 95 aa7.55□□□□□ -1.2
VPS4B-206ENST00000591475 STAB1Q9NY15 2570 aa7.55□□□□□ -1.2
VPS4B-206ENST00000591475 C6orf226Q5I0X4 101 aa7.54□□□□□ -1.2
VPS4B-206ENST00000591475 C9orf129Q5T035 196 aaKnown RBP7.54□□□□□ -1.2
VPS4B-206ENST00000591475 C19orf73Q9NVV2 129 aa7.54□□□□□ -1.2
VPS4B-206ENST00000591475 KLK5Q9Y337 293 aaPredicted RBP7.54□□□□□ -1.2
VPS4B-206ENST00000591475 HIST1H4AP62805 103 aaKnown RBP7.54□□□□□ -1.2
VPS4B-206ENST00000591475 TRRAPQ9Y4A5 3859 aa7.53□□□□□ -1.2
VPS4B-206ENST00000591475 ATOX1O00244 68 aa7.53□□□□□ -1.2
VPS4B-206ENST00000591475 Q6JHZ5 121 aa7.53□□□□□ -1.2
VPS4B-206ENST00000591475 WFDC9Q8NEX5 89 aa7.53□□□□□ -1.2
VPS4B-206ENST00000591475 C11orf68Q9H3H3 251 aaKnown RBP7.53□□□□□ -1.2
VPS4B-206ENST00000591475 COX7CP15954 63 aa7.52□□□□□ -1.2
VPS4B-206ENST00000591475 SS18Q15532 418 aa7.52□□□□□ -1.2
VPS4B-206ENST00000591475 C9orf66Q5T8R8 295 aa7.52□□□□□ -1.2
VPS4B-206ENST00000591475 ORMDL1Q9P0S3 153 aa7.52□□□□□ -1.2
VPS4B-206ENST00000591475 NCR3O14931 201 aa7.51□□□□□ -1.21
VPS4B-206ENST00000591475 Q8IZM0 81 aa7.51□□□□□ -1.21
VPS4B-206ENST00000591475 SLPIP03973 132 aa7.51□□□□□ -1.21
VPS4B-206ENST00000591475 XCL1P47992 114 aa7.51□□□□□ -1.21
VPS4B-206ENST00000591475 LINC00846Q9NV44 126 aa7.51□□□□□ -1.21
VPS4B-206ENST00000591475 NOTCH3Q9UM47 2321 aa7.5□□□□□ -1.21
VPS4B-206ENST00000591475 IGKV3D-7A0A0C4DH55 119 aa7.5□□□□□ -1.21
VPS4B-206ENST00000591475 A0A1B0GUV1 79 aa7.5□□□□□ -1.21
VPS4B-206ENST00000591475 DEFB130BP0DP73 79 aa7.5□□□□□ -1.21
VPS4B-206ENST00000591475 DEFB130AP0DP74 79 aa7.5□□□□□ -1.21
VPS4B-206ENST00000591475 RPL18AQ02543 176 aaKnown RBP7.5□□□□□ -1.21
VPS4B-206ENST00000591475 LINC01561Q8N1V8 128 aa7.5□□□□□ -1.21
VPS4B-206ENST00000591475 KIR2DL5BQ8NHK3 375 aa7.5□□□□□ -1.21
VPS4B-206ENST00000591475 C2orf48Q96LS8 159 aa7.5□□□□□ -1.21
VPS4B-206ENST00000591475 GYPEP15421 78 aa7.49□□□□□ -1.21
VPS4B-206ENST00000591475 SPATA3Q8NHX4 192 aa7.49□□□□□ -1.21
VPS4B-206ENST00000591475 A0A1B0GX51 115 aa7.49□□□□□ -1.21
VPS4B-206ENST00000591475 CRYGAP11844 174 aa7.49□□□□□ -1.21
VPS4B-206ENST00000591475 LINC00167Q96N53 147 aa7.49□□□□□ -1.21
VPS4B-206ENST00000591475 CCKP06307 115 aa7.48□□□□□ -1.21
VPS4B-206ENST00000591475 LINC00612Q8N6U2 182 aa7.48□□□□□ -1.21
VPS4B-206ENST00000591475 WIPF1O43516 503 aa7.47□□□□□ -1.21
VPS4B-206ENST00000591475 JMJD7-PLA2G4BH0Y9G9 81 aa7.47□□□□□ -1.21
VPS4B-206ENST00000591475 NDUFC2O95298 119 aa7.47□□□□□ -1.21
VPS4B-206ENST00000591475 CLPSL2Q6UWE3 100 aa7.47□□□□□ -1.21
VPS4B-206ENST00000591475 ANK2Q01484 3957 aa7.47□□□□□ -1.21
VPS4B-206ENST00000591475 PKD1L1Q8TDX9 2849 aa7.46□□□□□ -1.21
VPS4B-206ENST00000591475 NANOS2P60321 138 aaKnown RBP7.46□□□□□ -1.22
VPS4B-206ENST00000591475 COX17Q14061 63 aa7.46□□□□□ -1.22
VPS4B-206ENST00000591475 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
VPS4B-206ENST00000591475 Q8N814 137 aa7.46□□□□□ -1.22
VPS4B-206ENST00000591475 MDFIQ99750 246 aa7.46□□□□□ -1.22
VPS4B-206ENST00000591475 CFAP161Q6P656 301 aa7.45□□□□□ -1.22
VPS4B-206ENST00000591475 PRO0255Q9UI72 69 aa7.45□□□□□ -1.22
VPS4B-206ENST00000591475 TMEM256-PLSCR3K7ERE1 68 aa7.45□□□□□ -1.22
VPS4B-206ENST00000591475 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
VPS4B-206ENST00000591475 SERP2Q8N6R1 65 aa7.44□□□□□ -1.22
VPS4B-206ENST00000591475 A0A087WVE0 104 aa7.44□□□□□ -1.22
VPS4B-206ENST00000591475 KIAA0087Q14695 138 aa7.44□□□□□ -1.22
VPS4B-206ENST00000591475 CD164L2Q6UWJ8 174 aa7.44□□□□□ -1.22
VPS4B-206ENST00000591475 A0A096LPF7 62 aa7.43□□□□□ -1.22
VPS4B-206ENST00000591475 hADV29S1A0JD25 119 aa7.43□□□□□ -1.22
VPS4B-206ENST00000591475 LINC00269Q8N2A0 174 aa7.43□□□□□ -1.22
VPS4B-206ENST00000591475 SMIM9A6NGZ8 99 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms