RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 REV3LO60673 3130 aa12.03□□□□□ -0.48
SMARCA4-215ENST00000590574 DEFB131BA0A096LNP1 70 aa12.02□□□□□ -0.48
SMARCA4-215ENST00000590574 KLK5Q9Y337 293 aaPredicted RBP12.02□□□□□ -0.48
SMARCA4-215ENST00000590574 POLQO75417 2590 aa12.02□□□□□ -0.48
SMARCA4-215ENST00000590574 IGHV3OR16-9A0A0B4J2B5 98 aa12.02□□□□□ -0.49
SMARCA4-215ENST00000590574 KPRPQ5T749 579 aaPredicted RBP12.02□□□□□ -0.49
SMARCA4-215ENST00000590574 SHISA2Q6UWI4 295 aa12.02□□□□□ -0.49
SMARCA4-215ENST00000590574 FAM218AQ96MZ4 157 aa12.02□□□□□ -0.49
SMARCA4-215ENST00000590574 TRBV7-7A0A0K0K1E9 115 aa12.01□□□□□ -0.49
SMARCA4-215ENST00000590574 ZNF73O43830 326 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-215ENST00000590574 FHL3Q13643 280 aa12.01□□□□□ -0.49
SMARCA4-215ENST00000590574 BPY2O14599 106 aa12□□□□□ -0.49
SMARCA4-215ENST00000590574 ABCA12Q86UK0 2595 aa12□□□□□ -0.49
SMARCA4-215ENST00000590574 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12□□□□□ -0.49
SMARCA4-215ENST00000590574 C6orf223Q8N319 242 aa12□□□□□ -0.49
SMARCA4-215ENST00000590574 MGAQ8IWI9 3026 aa12□□□□□ -0.49
SMARCA4-215ENST00000590574 SYCNQ0VAF6 134 aa11.99□□□□□ -0.49
SMARCA4-215ENST00000590574 M0R378 163 aa11.99□□□□□ -0.49
SMARCA4-215ENST00000590574 FSHBP01225 129 aa11.99□□□□□ -0.49
SMARCA4-215ENST00000590574 IGHV4-30-4P0DP06 118 aa11.98□□□□□ -0.49
SMARCA4-215ENST00000590574 TMEM258P61165 79 aa11.98□□□□□ -0.49
SMARCA4-215ENST00000590574 IGKV2-28A0A075B6P5 120 aa11.98□□□□□ -0.49
SMARCA4-215ENST00000590574 IGKV2D-28P01615 120 aa11.98□□□□□ -0.49
SMARCA4-215ENST00000590574 LINC00846Q9NV44 126 aa11.98□□□□□ -0.49
SMARCA4-215ENST00000590574 MUC7Q8TAX7 377 aa11.97□□□□□ -0.49
SMARCA4-215ENST00000590574 TRBV10-3A0A0K0K1G6 114 aa11.97□□□□□ -0.49
SMARCA4-215ENST00000590574 FAM236DA0A1B0GTK5 79 aa11.96□□□□□ -0.49
SMARCA4-215ENST00000590574 NDUFC2O95298 119 aa11.96□□□□□ -0.49
SMARCA4-215ENST00000590574 FAM236CP0DP71 79 aa11.96□□□□□ -0.49
SMARCA4-215ENST00000590574 ANKRD17O75179 2603 aaKnown RBP11.96□□□□□ -0.5
SMARCA4-215ENST00000590574 ZNF462Q96JM2 2506 aa11.95□□□□□ -0.5
SMARCA4-215ENST00000590574 DOPEY1Q5JWR5 2465 aa11.95□□□□□ -0.5
SMARCA4-215ENST00000590574 EIF4EBP3O60516 100 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-215ENST00000590574 C3orf84H3BNL1 204 aa11.95□□□□□ -0.5
SMARCA4-215ENST00000590574 EYSQ5T1H1 3165 aa11.94□□□□□ -0.5
SMARCA4-215ENST00000590574 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-215ENST00000590574 A8MTW9 85 aa11.94□□□□□ -0.5
SMARCA4-215ENST00000590574 LINC01561Q8N1V8 128 aa11.93□□□□□ -0.5
SMARCA4-215ENST00000590574 IGKV2-24A0A0C4DH68 120 aa11.93□□□□□ -0.5
SMARCA4-215ENST00000590574 FN1P02751 2386 aaKnown RBP11.92□□□□□ -0.5
SMARCA4-215ENST00000590574 SNURFQ9Y675 71 aa11.92□□□□□ -0.5
SMARCA4-215ENST00000590574 PKD1L2Q7Z442 2459 aa11.92□□□□□ -0.5
SMARCA4-215ENST00000590574 FAM19A5Q7Z5A7 132 aaPredicted RBP11.91□□□□□ -0.5
SMARCA4-215ENST00000590574 RETNQ9HD89 108 aa11.91□□□□□ -0.5
SMARCA4-215ENST00000590574 LRRK2Q5S007 2527 aa11.9□□□□□ -0.5
SMARCA4-215ENST00000590574 OXLD1Q5BKU9 147 aa11.9□□□□□ -0.5
SMARCA4-215ENST00000590574 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
SMARCA4-215ENST00000590574 MYO15AQ9UKN7 3530 aa11.89□□□□□ -0.51
SMARCA4-215ENST00000590574 NANOS2P60321 138 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-215ENST00000590574 RPL37AP8A6NKH3 93 aa11.88□□□□□ -0.51
SMARCA4-215ENST00000590574 PRB2P02812 416 aaPredicted RBP11.88□□□□□ -0.51
SMARCA4-215ENST00000590574 A0A096LNT2 108 aa11.88□□□□□ -0.51
SMARCA4-215ENST00000590574 UBE2AP49459 152 aa11.88□□□□□ -0.51
SMARCA4-215ENST00000590574 EGFEM1PQ0D2K5 195 aa11.87□□□□□ -0.51
SMARCA4-215ENST00000590574 CELA1Q9UNI1 258 aa11.87□□□□□ -0.51
SMARCA4-215ENST00000590574 HIGD2AQ9BW72 106 aa11.87□□□□□ -0.51
SMARCA4-215ENST00000590574 FAM19A1Q7Z5A9 133 aa11.87□□□□□ -0.51
SMARCA4-215ENST00000590574 A0A0J9YWU9 116 aa11.86□□□□□ -0.51
SMARCA4-215ENST00000590574 DSPP15924 2871 aaKnown RBP11.86□□□□□ -0.51
SMARCA4-215ENST00000590574 FRYLO94915 3013 aa11.86□□□□□ -0.51
SMARCA4-215ENST00000590574 MP68P56378 58 aa11.85□□□□□ -0.51
SMARCA4-215ENST00000590574 LYPD5Q6UWN5 251 aa11.85□□□□□ -0.51
SMARCA4-215ENST00000590574 FAM19A3Q7Z5A8 133 aa11.85□□□□□ -0.51
SMARCA4-215ENST00000590574 X6R8D5 127 aa11.84□□□□□ -0.51
SMARCA4-215ENST00000590574 WFDC10BQ8IUB3 73 aa11.84□□□□□ -0.51
SMARCA4-215ENST00000590574 Q8N3U1 123 aa11.84□□□□□ -0.51
SMARCA4-215ENST00000590574 Q6ZTC4 211 aa11.83□□□□□ -0.52
SMARCA4-215ENST00000590574 DHRS4-AS1Q9P1J3 65 aa11.83□□□□□ -0.52
SMARCA4-215ENST00000590574 NDUFS5O43920 106 aa11.82□□□□□ -0.52
SMARCA4-215ENST00000590574 TRAV10A0A0B4J240 114 aa11.82□□□□□ -0.52
SMARCA4-215ENST00000590574 SMCR5Q8TEV8 140 aa11.82□□□□□ -0.52
SMARCA4-215ENST00000590574 ZFYVE26Q68DK2 2539 aa11.82□□□□□ -0.52
SMARCA4-215ENST00000590574 IL17DQ8TAD2 202 aa11.81□□□□□ -0.52
SMARCA4-215ENST00000590574 USP34Q70CQ2 3546 aa11.81□□□□□ -0.52
SMARCA4-215ENST00000590574 PKIGQ9Y2B9 76 aa11.8□□□□□ -0.52
SMARCA4-215ENST00000590574 TRAV7A0A075B6U4 112 aa11.8□□□□□ -0.52
SMARCA4-215ENST00000590574 MTORP42345 2549 aa11.8□□□□□ -0.52
SMARCA4-215ENST00000590574 NDUFC2-KCTD14E9PQ53 114 aa11.79□□□□□ -0.52
SMARCA4-215ENST00000590574 NBEAQ8NFP9 2946 aa11.79□□□□□ -0.52
SMARCA4-215ENST00000590574 Q6ZVQ6 151 aa11.79□□□□□ -0.52
SMARCA4-215ENST00000590574 C10orf25Q5T742 122 aa11.78□□□□□ -0.52
SMARCA4-215ENST00000590574 C5orf47Q569G3 176 aa11.78□□□□□ -0.52
SMARCA4-215ENST00000590574 AKAP13Q12802 2813 aa11.77□□□□□ -0.52
SMARCA4-215ENST00000590574 NDUFB1O75438 58 aa11.77□□□□□ -0.52
SMARCA4-215ENST00000590574 FREM2Q5SZK8 3169 aa11.77□□□□□ -0.52
SMARCA4-215ENST00000590574 Q6ZRU5 148 aa11.77□□□□□ -0.53
SMARCA4-215ENST00000590574 CSNK1G2-AS1Q8NCQ2 148 aa11.77□□□□□ -0.53
SMARCA4-215ENST00000590574 LOC107984640A0A0U1RRK4 108 aa11.77□□□□□ -0.53
SMARCA4-215ENST00000590574 NDUFC1O43677 76 aa11.76□□□□□ -0.53
SMARCA4-215ENST00000590574 LINC01547P58512 204 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-215ENST00000590574 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-215ENST00000590574 MPLKIPQ8TAP9 179 aa11.76□□□□□ -0.53
SMARCA4-215ENST00000590574 ZNF292O60281 2723 aa11.76□□□□□ -0.53
SMARCA4-215ENST00000590574 A0A096LNI7 61 aa11.75□□□□□ -0.53
SMARCA4-215ENST00000590574 COL6A3P12111 3177 aa11.75□□□□□ -0.53
SMARCA4-215ENST00000590574 H0Y9J4 135 aa11.75□□□□□ -0.53
SMARCA4-215ENST00000590574 GIG44P09565 113 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-215ENST00000590574 FRYQ5TBA9 3013 aa11.74□□□□□ -0.53
SMARCA4-215ENST00000590574 B9D2Q9BPU9 175 aa11.74□□□□□ -0.53
SMARCA4-215ENST00000590574 PLAC8L1A1L4L8 177 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms