RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 RAB5AP20339 215 aa6.18□□□□□ -1.42
RETREG3-209ENST00000590035 TEX43Q6ZNM6 134 aa6.18□□□□□ -1.42
RETREG3-209ENST00000590035 Q8N8P6 123 aa6.18□□□□□ -1.42
RETREG3-209ENST00000590035 RPL13AP40429 203 aaKnown RBP6.17□□□□□ -1.42
RETREG3-209ENST00000590035 Q8IZM0 81 aa6.17□□□□□ -1.42
RETREG3-209ENST00000590035 FAT4Q6V0I7 4981 aa6.16□□□□□ -1.42
RETREG3-209ENST00000590035 K7EMI3 77 aa6.16□□□□□ -1.42
RETREG3-209ENST00000590035 UBE2BP63146 152 aa6.16□□□□□ -1.42
RETREG3-209ENST00000590035 Q6ZN92 141 aa6.16□□□□□ -1.42
RETREG3-209ENST00000590035 PACRGQ96M98 296 aaPredicted RBP6.16□□□□□ -1.42
RETREG3-209ENST00000590035 MAP1LC3AQ9H492 121 aa6.16□□□□□ -1.42
RETREG3-209ENST00000590035 TP73-AS1Q9UF72 201 aa6.16□□□□□ -1.42
RETREG3-209ENST00000590035 CYSLTR1Q9Y271 337 aa6.16□□□□□ -1.42
RETREG3-209ENST00000590035 C22orf24Q9Y442 160 aa6.16□□□□□ -1.42
RETREG3-209ENST00000590035 NUPR1O60356 82 aa6.15□□□□□ -1.42
RETREG3-209ENST00000590035 ORMDL2Q53FV1 153 aa6.15□□□□□ -1.42
RETREG3-209ENST00000590035 LCE3BQ5TA77 95 aa6.15□□□□□ -1.42
RETREG3-209ENST00000590035 C2orf88Q9BSF0 95 aa6.15□□□□□ -1.42
RETREG3-209ENST00000590035 LOC389332A0A1B0GUA5 103 aa6.14□□□□□ -1.43
RETREG3-209ENST00000590035 TIMM17AQ99595 171 aa6.14□□□□□ -1.43
RETREG3-209ENST00000590035 VCX2Q9H322 139 aa6.14□□□□□ -1.43
RETREG3-209ENST00000590035 CDKN2A-AS1Q9UH64 79 aa6.14□□□□□ -1.43
RETREG3-209ENST00000590035 MUC17Q685J3 4493 aa6.14□□□□□ -1.43
RETREG3-209ENST00000590035 IGLV5-45A0A087WSX0 123 aa6.13□□□□□ -1.43
RETREG3-209ENST00000590035 A0A087X002 238 aa6.13□□□□□ -1.43
RETREG3-209ENST00000590035 F8VRH5 84 aa6.13□□□□□ -1.43
RETREG3-209ENST00000590035 PNRC1Q12796 327 aaPredicted RBP6.13□□□□□ -1.43
RETREG3-209ENST00000590035 KRTAP13-1Q8IUC0 172 aa6.13□□□□□ -1.43
RETREG3-209ENST00000590035 LINC00469Q8N7U9 141 aa6.13□□□□□ -1.43
RETREG3-209ENST00000590035 XAGE1AQ9HD64 81 aa6.13□□□□□ -1.43
RETREG3-209ENST00000590035 SMIM1B2RUZ4 78 aa6.12□□□□□ -1.43
RETREG3-209ENST00000590035 HERVK_113P63121 156 aa6.12□□□□□ -1.43
RETREG3-209ENST00000590035 C6orf226Q5I0X4 101 aa6.12□□□□□ -1.43
RETREG3-209ENST00000590035 TOMM6Q96B49 74 aa6.12□□□□□ -1.43
RETREG3-209ENST00000590035 ALKBH7Q9BT30 221 aaPredicted RBP6.12□□□□□ -1.43
RETREG3-209ENST00000590035 CTDSP1Q9GZU7 261 aa6.12□□□□□ -1.43
RETREG3-209ENST00000590035 NXT2Q9NPJ8 142 aaKnown RBP6.12□□□□□ -1.43
RETREG3-209ENST00000590035 IGLV5-37A0A075B6J1 123 aa6.11□□□□□ -1.43
RETREG3-209ENST00000590035 LINC01546A6NGU7 62 aa6.11□□□□□ -1.43
RETREG3-209ENST00000590035 BCE1O60756 84 aa6.11□□□□□ -1.43
RETREG3-209ENST00000590035 PRSS2P07478 247 aa6.11□□□□□ -1.43
RETREG3-209ENST00000590035 CXCL5P42830 114 aa6.11□□□□□ -1.43
RETREG3-209ENST00000590035 CKS1BP61024 79 aa6.11□□□□□ -1.43
RETREG3-209ENST00000590035 SEC11AP67812 179 aa6.11□□□□□ -1.43
RETREG3-209ENST00000590035 LBHQ53QV2 105 aaPredicted RBP6.11□□□□□ -1.43
RETREG3-209ENST00000590035 MRPL55Q7Z7F7 128 aaKnown RBP6.11□□□□□ -1.43
RETREG3-209ENST00000590035 TOMM7Q9P0U1 55 aa6.11□□□□□ -1.43
RETREG3-209ENST00000590035 MT-ND4LP03901 98 aa6.1□□□□□ -1.43
RETREG3-209ENST00000590035 PRR4Q16378 134 aa6.1□□□□□ -1.43
RETREG3-209ENST00000590035 LINC00167Q96N53 147 aa6.1□□□□□ -1.43
RETREG3-209ENST00000590035 TINCRA0A1B0GVN0 87 aa6.09□□□□□ -1.43
RETREG3-209ENST00000590035 KRTAP13-2Q52LG2 175 aa6.09□□□□□ -1.43
RETREG3-209ENST00000590035 PDZD11Q5EBL8 140 aa6.09□□□□□ -1.43
RETREG3-209ENST00000590035 PAPPA-AS1Q5QFB9 102 aa6.09□□□□□ -1.43
RETREG3-209ENST00000590035 ERASQ7Z444 233 aa6.09□□□□□ -1.43
RETREG3-209ENST00000590035 ADCYAP1P18509 176 aa6.08□□□□□ -1.44
RETREG3-209ENST00000590035 RPL28P46779 137 aaKnown RBP6.08□□□□□ -1.44
RETREG3-209ENST00000590035 CRYGAP11844 174 aa6.07□□□□□ -1.44
RETREG3-209ENST00000590035 G0S2P27469 103 aa6.07□□□□□ -1.44
RETREG3-209ENST00000590035 COX7B2Q8TF08 81 aa6.07□□□□□ -1.44
RETREG3-209ENST00000590035 GEMIN7Q9H840 131 aaKnown RBP6.07□□□□□ -1.44
RETREG3-209ENST00000590035 KIAA1644Q3SXP7 199 aa6.06□□□□□ -1.44
RETREG3-209ENST00000590035 CST9LQ9H4G1 147 aa6.06□□□□□ -1.44
RETREG3-209ENST00000590035 TRAV9-1A0A075B6T8 112 aa6.05□□□□□ -1.44
RETREG3-209ENST00000590035 IGLV5-39A0A0G2JS06 123 aa6.05□□□□□ -1.44
RETREG3-209ENST00000590035 RPL37AP8A6NKH3 93 aa6.05□□□□□ -1.44
RETREG3-209ENST00000590035 TSPAN13O95857 204 aa6.05□□□□□ -1.44
RETREG3-209ENST00000590035 FAM229BQ4G0N7 80 aa6.05□□□□□ -1.44
RETREG3-209ENST00000590035 SCGB3A1Q96QR1 104 aa6.05□□□□□ -1.44
RETREG3-209ENST00000590035 ANAPC11Q9NYG5 84 aa6.05□□□□□ -1.44
RETREG3-209ENST00000590035 LINC01549A6NIU2 74 aa6.04□□□□□ -1.44
RETREG3-209ENST00000590035 LINC00310P59036 64 aa6.04□□□□□ -1.44
RETREG3-209ENST00000590035 CTAG1AP78358 180 aa6.04□□□□□ -1.44
RETREG3-209ENST00000590035 TYMSOSQ8TAI1 123 aa6.04□□□□□ -1.44
RETREG3-209ENST00000590035 A0A096LNJ9 63 aa6.03□□□□□ -1.44
RETREG3-209ENST00000590035 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
RETREG3-209ENST00000590035 GNB1LQ9BYB4 327 aa6.03□□□□□ -1.44
RETREG3-209ENST00000590035 GAGE10A6NGK3 116 aa6.02□□□□□ -1.45
RETREG3-209ENST00000590035 SPINK8P0C7L1 97 aa6.02□□□□□ -1.45
RETREG3-209ENST00000590035 IGLC3P0DOY3 106 aa6.02□□□□□ -1.45
RETREG3-209ENST00000590035 VPREB1P12018 145 aa6.02□□□□□ -1.45
RETREG3-209ENST00000590035 PMVKQ15126 192 aa6.02□□□□□ -1.45
RETREG3-209ENST00000590035 CLLU1Q5K131 121 aa6.02□□□□□ -1.45
RETREG3-209ENST00000590035 Q8NDZ9 215 aa6.02□□□□□ -1.45
RETREG3-209ENST00000590035 A0A0U1RQV1 116 aa6.01□□□□□ -1.45
RETREG3-209ENST00000590035 SCO1O75880 301 aa6.01□□□□□ -1.45
RETREG3-209ENST00000590035 TPRXLQ17RH7 258 aa6.01□□□□□ -1.45
RETREG3-209ENST00000590035 KRTAP9-9Q9BYP9 154 aa6.01□□□□□ -1.45
RETREG3-209ENST00000590035 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
RETREG3-209ENST00000590035 TMEM218A2RU14 115 aa6□□□□□ -1.45
RETREG3-209ENST00000590035 LINC00304Q8N9R0 145 aa6□□□□□ -1.45
RETREG3-209ENST00000590035 URB1-AS1Q96HZ7 61 aa6□□□□□ -1.45
RETREG3-209ENST00000590035 IGKV2-28A0A075B6P5 120 aa5.99□□□□□ -1.45
RETREG3-209ENST00000590035 M0R378 163 aa5.99□□□□□ -1.45
RETREG3-209ENST00000590035 IGKV2D-28P01615 120 aa5.99□□□□□ -1.45
RETREG3-209ENST00000590035 ZNF22P17026 224 aaPredicted RBP5.99□□□□□ -1.45
RETREG3-209ENST00000590035 RAB5BP61020 215 aa5.99□□□□□ -1.45
RETREG3-209ENST00000590035 UQCC3Q6UW78 93 aa5.99□□□□□ -1.45
RETREG3-209ENST00000590035 NKAPP1Q8N9T2 125 aa5.99□□□□□ -1.45
RETREG3-209ENST00000590035 TMEM126AQ9H061 195 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms