RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 SPG11Q96JI7 2443 aa10.46□□□□□ -0.74
SMARCA4-214ENST00000589677 IGLV4-60A0A075B6I1 120 aa10.45□□□□□ -0.74
SMARCA4-214ENST00000589677 C19orf84I3L1E1 186 aa10.44□□□□□ -0.74
SMARCA4-214ENST00000589677 IGHV4-31P0DP07 118 aa10.44□□□□□ -0.74
SMARCA4-214ENST00000589677 NANOS2P60321 138 aaKnown RBP10.44□□□□□ -0.74
SMARCA4-214ENST00000589677 CHD9Q3L8U1 2897 aa10.44□□□□□ -0.74
SMARCA4-214ENST00000589677 hDV103S1A0JD37 113 aa10.43□□□□□ -0.74
SMARCA4-214ENST00000589677 C9orf116Q5BN46 136 aaPredicted RBP10.43□□□□□ -0.74
SMARCA4-214ENST00000589677 COL5A1P20908 1838 aaPredicted RBP10.43□□□□□ -0.74
SMARCA4-214ENST00000589677 LIMD2Q9BT23 127 aa10.43□□□□□ -0.74
SMARCA4-214ENST00000589677 Q6ZSN1 163 aa10.42□□□□□ -0.74
SMARCA4-214ENST00000589677 DEFB131BA0A096LNP1 70 aa10.41□□□□□ -0.74
SMARCA4-214ENST00000589677 LINC00315P59091 139 aa10.41□□□□□ -0.74
SMARCA4-214ENST00000589677 AGRNO00468 2067 aa10.41□□□□□ -0.74
SMARCA4-214ENST00000589677 EDN2P20800 178 aa10.41□□□□□ -0.74
SMARCA4-214ENST00000589677 RPL37AP8A6NKH3 93 aa10.41□□□□□ -0.74
SMARCA4-214ENST00000589677 Q8N2B8 174 aa10.41□□□□□ -0.74
SMARCA4-214ENST00000589677 WNK1Q9H4A3 2382 aa10.4□□□□□ -0.74
SMARCA4-214ENST00000589677 PTPN13Q12923 2485 aa10.39□□□□□ -0.75
SMARCA4-214ENST00000589677 A0A1B0GUV1 79 aa10.39□□□□□ -0.75
SMARCA4-214ENST00000589677 ZNF706Q9Y5V0 76 aaPredicted RBP10.39□□□□□ -0.75
SMARCA4-214ENST00000589677 WDR87Q6ZQQ6 2873 aa10.39□□□□□ -0.75
SMARCA4-214ENST00000589677 ODF3L2Q3SX64 289 aa10.39□□□□□ -0.75
SMARCA4-214ENST00000589677 IGLV5-45A0A087WSX0 123 aa10.38□□□□□ -0.75
SMARCA4-214ENST00000589677 PLAC8L1A1L4L8 177 aa10.38□□□□□ -0.75
SMARCA4-214ENST00000589677 C10orf25Q5T742 122 aa10.38□□□□□ -0.75
SMARCA4-214ENST00000589677 C18orf65Q6ZTR6 163 aa10.38□□□□□ -0.75
SMARCA4-214ENST00000589677 HCG22E2RYF7 251 aa10.37□□□□□ -0.75
SMARCA4-214ENST00000589677 H0Y9P7 68 aa10.37□□□□□ -0.75
SMARCA4-214ENST00000589677 FHL2Q14192 279 aa10.37□□□□□ -0.75
SMARCA4-214ENST00000589677 FAM218AQ96MZ4 157 aa10.37□□□□□ -0.75
SMARCA4-214ENST00000589677 LINC00482Q8N8I6 264 aa10.36□□□□□ -0.75
SMARCA4-214ENST00000589677 KPRPQ5T749 579 aaPredicted RBP10.36□□□□□ -0.75
SMARCA4-214ENST00000589677 FAM19A4Q96LR4 140 aa10.35□□□□□ -0.75
SMARCA4-214ENST00000589677 F8WDY8 70 aa10.35□□□□□ -0.75
SMARCA4-214ENST00000589677 NHLRC4P0CG21 123 aaPredicted RBP10.35□□□□□ -0.75
SMARCA4-214ENST00000589677 SPATA3Q8NHX4 192 aa10.35□□□□□ -0.75
SMARCA4-214ENST00000589677 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.33□□□□□ -0.76
SMARCA4-214ENST00000589677 PRRC2AP48634 2157 aaKnown RBP10.33□□□□□ -0.76
SMARCA4-214ENST00000589677 FHL3Q13643 280 aa10.33□□□□□ -0.76
SMARCA4-214ENST00000589677 UNC80Q8N2C7 3258 aa10.33□□□□□ -0.76
SMARCA4-214ENST00000589677 C2CD3Q4AC94 2353 aa10.32□□□□□ -0.76
SMARCA4-214ENST00000589677 TRANK1O15050 2925 aa10.32□□□□□ -0.76
SMARCA4-214ENST00000589677 IGF2RP11717 2491 aa10.32□□□□□ -0.76
SMARCA4-214ENST00000589677 LINC01006Q8NI28 216 aa10.32□□□□□ -0.76
SMARCA4-214ENST00000589677 LOC110117498A0A087WWA1 95 aa10.31□□□□□ -0.76
SMARCA4-214ENST00000589677 PLA2G2AP14555 144 aa10.31□□□□□ -0.76
SMARCA4-214ENST00000589677 CDH23Q9H251 3354 aa10.31□□□□□ -0.76
SMARCA4-214ENST00000589677 A0A1B0GW54 56 aa10.3□□□□□ -0.76
SMARCA4-214ENST00000589677 REG3GQ6UW15 175 aa10.3□□□□□ -0.76
SMARCA4-214ENST00000589677 HIVEP2P31629 2446 aa10.3□□□□□ -0.76
SMARCA4-214ENST00000589677 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
SMARCA4-214ENST00000589677 SMIM29Q86T20 159 aa10.3□□□□□ -0.76
SMARCA4-214ENST00000589677 DSCAMO60469 2012 aa10.3□□□□□ -0.76
SMARCA4-214ENST00000589677 CSPG4Q6UVK1 2322 aa10.29□□□□□ -0.76
SMARCA4-214ENST00000589677 IGHV3OR16-9A0A0B4J2B5 98 aa10.29□□□□□ -0.76
SMARCA4-214ENST00000589677 A8MTW9 85 aa10.29□□□□□ -0.76
SMARCA4-214ENST00000589677 Q6ZQT0 140 aa10.29□□□□□ -0.76
SMARCA4-214ENST00000589677 SMCR5Q8TEV8 140 aa10.29□□□□□ -0.76
SMARCA4-214ENST00000589677 C2orf48Q96LS8 159 aa10.29□□□□□ -0.76
SMARCA4-214ENST00000589677 TRAV10A0A0B4J240 114 aa10.28□□□□□ -0.76
SMARCA4-214ENST00000589677 IGHV4-30-4P0DP06 118 aa10.28□□□□□ -0.76
SMARCA4-214ENST00000589677 PCOTHQ58A44 107 aa10.28□□□□□ -0.76
SMARCA4-214ENST00000589677 ATRXP46100 2492 aa10.28□□□□□ -0.76
SMARCA4-214ENST00000589677 LITAFQ99732 161 aa10.28□□□□□ -0.76
SMARCA4-214ENST00000589677 C6orf223Q8N319 242 aa10.27□□□□□ -0.76
SMARCA4-214ENST00000589677 TET2Q6N021 2002 aaPredicted RBP10.27□□□□□ -0.77
SMARCA4-214ENST00000589677 A0A087WSZ3 146 aa10.26□□□□□ -0.77
SMARCA4-214ENST00000589677 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.26□□□□□ -0.77
SMARCA4-214ENST00000589677 CHD8Q9HCK8 2581 aa10.26□□□□□ -0.77
SMARCA4-214ENST00000589677 C11orf72Q8NBR9 251 aa10.26□□□□□ -0.77
SMARCA4-214ENST00000589677 C1orf64Q8NEQ6 169 aa10.26□□□□□ -0.77
SMARCA4-214ENST00000589677 IGLV9-49A0A0B4J1Y8 123 aa10.25□□□□□ -0.77
SMARCA4-214ENST00000589677 LINC00474Q9P2X8 69 aa10.25□□□□□ -0.77
SMARCA4-214ENST00000589677 ADAMTS20P59510 1910 aa10.25□□□□□ -0.77
SMARCA4-214ENST00000589677 ERC2-IT1O76042 136 aa10.23□□□□□ -0.77
SMARCA4-214ENST00000589677 AVPP01185 164 aa10.23□□□□□ -0.77
SMARCA4-214ENST00000589677 IGLV1-51P01701 117 aa10.23□□□□□ -0.77
SMARCA4-214ENST00000589677 SORL1Q92673 2214 aa10.23□□□□□ -0.77
SMARCA4-214ENST00000589677 Q9BRP9 147 aa10.23□□□□□ -0.77
SMARCA4-214ENST00000589677 TM2D3Q9BRN9 247 aa10.22□□□□□ -0.77
SMARCA4-214ENST00000589677 H3BPC8 53 aa10.22□□□□□ -0.77
SMARCA4-214ENST00000589677 EXPH5Q8NEV8 1989 aa10.22□□□□□ -0.77
SMARCA4-214ENST00000589677 CDSNQ15517 529 aa10.21□□□□□ -0.77
SMARCA4-214ENST00000589677 IL17DQ8TAD2 202 aa10.21□□□□□ -0.78
SMARCA4-214ENST00000589677 NAV2Q8IVL1 2488 aa10.2□□□□□ -0.78
SMARCA4-214ENST00000589677 IGHV6-1A0A0B4J1U7 121 aa10.2□□□□□ -0.78
SMARCA4-214ENST00000589677 MYO18BQ8IUG5 2567 aa10.2□□□□□ -0.78
SMARCA4-214ENST00000589677 PRUNE2Q8WUY3 3088 aa10.19□□□□□ -0.78
SMARCA4-214ENST00000589677 KIAA0087Q14695 138 aa10.19□□□□□ -0.78
SMARCA4-214ENST00000589677 TLN1Q9Y490 2541 aaKnown RBP10.19□□□□□ -0.78
SMARCA4-214ENST00000589677 DEFB116Q30KQ4 102 aa10.18□□□□□ -0.78
SMARCA4-214ENST00000589677 PIEZO2Q9H5I5 2752 aa10.18□□□□□ -0.78
SMARCA4-214ENST00000589677 RAI1Q7Z5J4 1906 aaPredicted RBP10.17□□□□□ -0.78
SMARCA4-214ENST00000589677 Q9UF83 564 aa10.17□□□□□ -0.78
SMARCA4-214ENST00000589677 ELOF1P60002 83 aaKnown RBP10.17□□□□□ -0.78
SMARCA4-214ENST00000589677 SONP18583 2426 aaKnown RBP10.16□□□□□ -0.78
SMARCA4-214ENST00000589677 KLKP1Q107X0 134 aa10.16□□□□□ -0.78
SMARCA4-214ENST00000589677 C7orf33Q8WU49 177 aa10.16□□□□□ -0.78
SMARCA4-214ENST00000589677 TP53AIP1Q9HCN2 124 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms