RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 SNAPINO95295 136 aa6.59□□□□□ -1.35
CLPTM1-211ENST00000589347 KIAA0087Q14695 138 aa6.59□□□□□ -1.35
CLPTM1-211ENST00000589347 GAGE2EQ4V326 116 aa6.59□□□□□ -1.35
CLPTM1-211ENST00000589347 C10orf25Q5T742 122 aa6.59□□□□□ -1.35
CLPTM1-211ENST00000589347 ZC2HC1BQ5TFG8 222 aa6.59□□□□□ -1.35
CLPTM1-211ENST00000589347 SVBPQ8N300 66 aa6.59□□□□□ -1.35
CLPTM1-211ENST00000589347 GAGE2DQ9UEU5 116 aa6.59□□□□□ -1.35
CLPTM1-211ENST00000589347 LINC01546A6NGU7 62 aa6.58□□□□□ -1.36
CLPTM1-211ENST00000589347 NDUFC2-KCTD14E9PQ53 114 aa6.58□□□□□ -1.36
CLPTM1-211ENST00000589347 C6orf226Q5I0X4 101 aa6.58□□□□□ -1.36
CLPTM1-211ENST00000589347 PHF5AQ7RTV0 110 aaKnown RBP6.58□□□□□ -1.36
CLPTM1-211ENST00000589347 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
CLPTM1-211ENST00000589347 LINC00469Q8N7U9 141 aa6.58□□□□□ -1.36
CLPTM1-211ENST00000589347 APOC3P02656 99 aa6.57□□□□□ -1.36
CLPTM1-211ENST00000589347 MT1HL1P0DM35 61 aa6.57□□□□□ -1.36
CLPTM1-211ENST00000589347 UBE2BP63146 152 aa6.57□□□□□ -1.36
CLPTM1-211ENST00000589347 C2orf82Q6UX34 121 aa6.57□□□□□ -1.36
CLPTM1-211ENST00000589347 TRAPPC1Q9Y5R8 145 aa6.57□□□□□ -1.36
CLPTM1-211ENST00000589347 TINCRA0A1B0GVN0 87 aa6.56□□□□□ -1.36
CLPTM1-211ENST00000589347 F8VRH5 84 aa6.56□□□□□ -1.36
CLPTM1-211ENST00000589347 M0QXV9 152 aa6.56□□□□□ -1.36
CLPTM1-211ENST00000589347 PMVKQ15126 192 aa6.56□□□□□ -1.36
CLPTM1-211ENST00000589347 C1orf137Q5JT78 98 aa6.56□□□□□ -1.36
CLPTM1-211ENST00000589347 CDKN2A-AS1Q9UH64 79 aa6.56□□□□□ -1.36
CLPTM1-211ENST00000589347 PSORS1C2Q9UIG4 136 aa6.56□□□□□ -1.36
CLPTM1-211ENST00000589347 H3BRM9 83 aa6.55□□□□□ -1.36
CLPTM1-211ENST00000589347 RAB5BP61020 215 aa6.55□□□□□ -1.36
CLPTM1-211ENST00000589347 PDZD11Q5EBL8 140 aa6.55□□□□□ -1.36
CLPTM1-211ENST00000589347 KRTAP9-2Q9BYQ4 174 aa6.55□□□□□ -1.36
CLPTM1-211ENST00000589347 IGLV5-45A0A087WSX0 123 aa6.54□□□□□ -1.36
CLPTM1-211ENST00000589347 FAM168BA1KXE4 195 aa6.54□□□□□ -1.36
CLPTM1-211ENST00000589347 SMIM1B2RUZ4 78 aa6.54□□□□□ -1.36
CLPTM1-211ENST00000589347 HBDP02042 147 aa6.54□□□□□ -1.36
CLPTM1-211ENST00000589347 COX7B2Q8TF08 81 aa6.54□□□□□ -1.36
CLPTM1-211ENST00000589347 LINC01600Q96MT4 127 aa6.54□□□□□ -1.36
CLPTM1-211ENST00000589347 C18orf32Q8TCD1 76 aa6.53□□□□□ -1.36
CLPTM1-211ENST00000589347 CST9LQ9H4G1 147 aa6.53□□□□□ -1.36
CLPTM1-211ENST00000589347 LINC00614P0C842 121 aa6.52□□□□□ -1.37
CLPTM1-211ENST00000589347 NDUFA6P56556 154 aa6.52□□□□□ -1.37
CLPTM1-211ENST00000589347 SRSF9Q13242 221 aaKnown RBP eCLIP6.52□□□□□ -1.37
CLPTM1-211ENST00000589347 DIRC1Q969H9 104 aa6.52□□□□□ -1.37
CLPTM1-211ENST00000589347 ATP5LO75964 103 aa6.51□□□□□ -1.37
CLPTM1-211ENST00000589347 IGLV7-43P04211 117 aa6.51□□□□□ -1.37
CLPTM1-211ENST00000589347 SPINK8P0C7L1 97 aa6.51□□□□□ -1.37
CLPTM1-211ENST00000589347 LBHQ53QV2 105 aaPredicted RBP6.51□□□□□ -1.37
CLPTM1-211ENST00000589347 C9orf129Q5T035 196 aaKnown RBP6.51□□□□□ -1.37
CLPTM1-211ENST00000589347 IGLC3P0DOY3 106 aa6.5□□□□□ -1.37
CLPTM1-211ENST00000589347 NUPR1O60356 82 aa6.49□□□□□ -1.37
CLPTM1-211ENST00000589347 ODF1Q14990 250 aa6.49□□□□□ -1.37
CLPTM1-211ENST00000589347 SFTA2Q6UW10 78 aa6.49□□□□□ -1.37
CLPTM1-211ENST00000589347 A0A096LNJ9 63 aa6.48□□□□□ -1.37
CLPTM1-211ENST00000589347 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
CLPTM1-211ENST00000589347 H0Y9J4 135 aa6.48□□□□□ -1.37
CLPTM1-211ENST00000589347 CTAG1AP78358 180 aa6.48□□□□□ -1.37
CLPTM1-211ENST00000589347 CHCHD1Q96BP2 118 aaKnown RBP6.48□□□□□ -1.37
CLPTM1-211ENST00000589347 XAGE1AQ9HD64 81 aa6.48□□□□□ -1.37
CLPTM1-211ENST00000589347 TP73-AS1Q9UF72 201 aa6.48□□□□□ -1.37
CLPTM1-211ENST00000589347 PMCHL1Q16048 86 aa6.47□□□□□ -1.37
CLPTM1-211ENST00000589347 MRPL55Q7Z7F7 128 aaKnown RBP6.47□□□□□ -1.37
CLPTM1-211ENST00000589347 SLC7A5P1Q8MH63 180 aa6.47□□□□□ -1.37
CLPTM1-211ENST00000589347 NKAPP1Q8N9T2 125 aa6.47□□□□□ -1.37
CLPTM1-211ENST00000589347 URB1-AS1Q96HZ7 61 aa6.47□□□□□ -1.37
CLPTM1-211ENST00000589347 C22orf24Q9Y442 160 aa6.47□□□□□ -1.37
CLPTM1-211ENST00000589347 ZNF22P17026 224 aaPredicted RBP6.46□□□□□ -1.38
CLPTM1-211ENST00000589347 TMEM170BQ5T4T1 132 aa6.46□□□□□ -1.38
CLPTM1-211ENST00000589347 KRTAP7-1Q8IUC3 87 aa6.46□□□□□ -1.38
CLPTM1-211ENST00000589347 IGLV5-39A0A0G2JS06 123 aa6.45□□□□□ -1.38
CLPTM1-211ENST00000589347 BAGE3Q86Y29 109 aa6.45□□□□□ -1.38
CLPTM1-211ENST00000589347 CHTOPQ9Y3Y2 248 aaKnown RBP6.45□□□□□ -1.38
CLPTM1-211ENST00000589347 C11orf86A6NJI1 115 aa6.44□□□□□ -1.38
CLPTM1-211ENST00000589347 HSBP1O75506 76 aa6.44□□□□□ -1.38
CLPTM1-211ENST00000589347 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
CLPTM1-211ENST00000589347 COX17Q14061 63 aa6.44□□□□□ -1.38
CLPTM1-211ENST00000589347 KRTAP11-1Q8IUC1 163 aa6.44□□□□□ -1.38
CLPTM1-211ENST00000589347 YPEL4Q96NS1 127 aa6.44□□□□□ -1.38
CLPTM1-211ENST00000589347 IGLV1-50A0A075B6I6 118 aa6.43□□□□□ -1.38
CLPTM1-211ENST00000589347 IGLV5-37A0A075B6J1 123 aa6.43□□□□□ -1.38
CLPTM1-211ENST00000589347 TRAV12-1A0A0B4J245 112 aa6.43□□□□□ -1.38
CLPTM1-211ENST00000589347 PFN2P35080 140 aa6.43□□□□□ -1.38
CLPTM1-211ENST00000589347 RPL13AP40429 203 aaKnown RBP6.43□□□□□ -1.38
CLPTM1-211ENST00000589347 CBLN2Q8IUK8 224 aa6.43□□□□□ -1.38
CLPTM1-211ENST00000589347 IFI27L1Q96BM0 104 aa6.43□□□□□ -1.38
CLPTM1-211ENST00000589347 ERG28Q9UKR5 140 aa6.43□□□□□ -1.38
CLPTM1-211ENST00000589347 FAT4Q6V0I7 4981 aa6.42□□□□□ -1.38
CLPTM1-211ENST00000589347 LOC105371267A0A1B0GV96 52 aa6.42□□□□□ -1.38
CLPTM1-211ENST00000589347 ZNF861PO60384 105 aa6.42□□□□□ -1.38
CLPTM1-211ENST00000589347 RPL28P46779 137 aaKnown RBP6.42□□□□□ -1.38
CLPTM1-211ENST00000589347 BCE1O60756 84 aa6.41□□□□□ -1.38
CLPTM1-211ENST00000589347 RPL24P83731 157 aaKnown RBP6.41□□□□□ -1.38
CLPTM1-211ENST00000589347 LINC00167Q96N53 147 aa6.41□□□□□ -1.38
CLPTM1-211ENST00000589347 GAGE10A6NGK3 116 aa6.4□□□□□ -1.38
CLPTM1-211ENST00000589347 RPL37AP8A6NKH3 93 aa6.4□□□□□ -1.38
CLPTM1-211ENST00000589347 TMEM223A0PJW6 202 aa6.39□□□□□ -1.39
CLPTM1-211ENST00000589347 UBE2AP49459 152 aa6.39□□□□□ -1.39
CLPTM1-211ENST00000589347 PRR26Q8N8Z3 221 aa6.39□□□□□ -1.39
CLPTM1-211ENST00000589347 H0Y8G0 127 aa6.38□□□□□ -1.39
CLPTM1-211ENST00000589347 LEPROTL1O95214 131 aa6.38□□□□□ -1.39
CLPTM1-211ENST00000589347 TRGC2P03986 189 aa6.38□□□□□ -1.39
CLPTM1-211ENST00000589347 MEIG1Q5JSS6 88 aa6.38□□□□□ -1.39
CLPTM1-211ENST00000589347 ZNF625Q96I27 306 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms