RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 KIAA0087Q14695 138 aa11.14□□□□□ -0.63
NFIX-210ENST00000588228 DAND5Q8N907 189 aa11.14□□□□□ -0.63
NFIX-210ENST00000588228 COPS9Q8WXC6 57 aa11.14□□□□□ -0.63
NFIX-210ENST00000588228 NAA38Q9BRA0 125 aaKnown RBP11.14□□□□□ -0.63
NFIX-210ENST00000588228 KLK5Q9Y337 293 aaPredicted RBP11.14□□□□□ -0.63
NFIX-210ENST00000588228 A0A0B4J2C4 111 aa11.13□□□□□ -0.63
NFIX-210ENST00000588228 A0A1W2PPM0 123 aa11.13□□□□□ -0.63
NFIX-210ENST00000588228 IBA57-AS1B1ANH7 110 aa11.13□□□□□ -0.63
NFIX-210ENST00000588228 A0A0U1RRA0 63 aa11.12□□□□□ -0.63
NFIX-210ENST00000588228 NPC2P61916 151 aa11.12□□□□□ -0.63
NFIX-210ENST00000588228 CFAP161Q6P656 301 aa11.12□□□□□ -0.63
NFIX-210ENST00000588228 LINC00308Q8TCZ7 52 aa11.12□□□□□ -0.63
NFIX-210ENST00000588228 UPK3BQ9BT76 320 aa11.12□□□□□ -0.63
NFIX-210ENST00000588228 PPDPFQ9H3Y8 114 aa11.12□□□□□ -0.63
NFIX-210ENST00000588228 CKS1BP61024 79 aa11.11□□□□□ -0.63
NFIX-210ENST00000588228 PGPEP1Q9NXJ5 209 aa11.11□□□□□ -0.63
NFIX-210ENST00000588228 KRTAP26-1Q6PEX3 210 aa11.11□□□□□ -0.63
NFIX-210ENST00000588228 PRO1854Q9UHT4 67 aa11.11□□□□□ -0.63
NFIX-210ENST00000588228 FABP2P12104 132 aa11.1□□□□□ -0.63
NFIX-210ENST00000588228 UBE2V1Q13404 147 aa11.1□□□□□ -0.63
NFIX-210ENST00000588228 EIF4EBP3O60516 100 aaPredicted RBP11.09□□□□□ -0.63
NFIX-210ENST00000588228 SPAG11BQ08648 103 aa11.09□□□□□ -0.63
NFIX-210ENST00000588228 C2orf82Q6UX34 121 aa11.09□□□□□ -0.63
NFIX-210ENST00000588228 C1orf43Q9BWL3 253 aa11.09□□□□□ -0.63
NFIX-210ENST00000588228 ERG28Q9UKR5 140 aa11.09□□□□□ -0.63
NFIX-210ENST00000588228 LINC00158P58513 81 aa11.08□□□□□ -0.64
NFIX-210ENST00000588228 SOSTDC1Q6X4U4 206 aa11.08□□□□□ -0.64
NFIX-210ENST00000588228 TSPAN13O95857 204 aa11.08□□□□□ -0.64
NFIX-210ENST00000588228 MIR7-3HGQ8N6C7 128 aa11.08□□□□□ -0.64
NFIX-210ENST00000588228 GTF2H5Q6ZYL4 71 aa11.07□□□□□ -0.64
NFIX-210ENST00000588228 APLNQ9ULZ1 77 aa11.07□□□□□ -0.64
NFIX-210ENST00000588228 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
NFIX-210ENST00000588228 K7EP34 96 aa11.06□□□□□ -0.64
NFIX-210ENST00000588228 SPCS1Q9Y6A9 102 aa11.06□□□□□ -0.64
NFIX-210ENST00000588228 NUPR2A6NF83 97 aa11.05□□□□□ -0.64
NFIX-210ENST00000588228 PFN2P35080 140 aa11.05□□□□□ -0.64
NFIX-210ENST00000588228 COL7A1Q02388 2944 aa11.05□□□□□ -0.64
NFIX-210ENST00000588228 IGKV2D-24A0A075B6R9 120 aa11.04□□□□□ -0.64
NFIX-210ENST00000588228 COX17Q14061 63 aa11.04□□□□□ -0.64
NFIX-210ENST00000588228 C6orf223Q8N319 242 aa11.03□□□□□ -0.64
NFIX-210ENST00000588228 NTN5Q8WTR8 489 aaPredicted RBP11.02□□□□□ -0.64
NFIX-210ENST00000588228 Q9HAA7 133 aa11.02□□□□□ -0.64
NFIX-210ENST00000588228 LYRM7Q5U5X0 104 aa11.01□□□□□ -0.65
NFIX-210ENST00000588228 UNQ6190/PRO20217Q6UXQ8 127 aa11.01□□□□□ -0.65
NFIX-210ENST00000588228 C15orf56Q8N910 161 aa11.01□□□□□ -0.65
NFIX-210ENST00000588228 LINC00526Q96FQ7 95 aa11.01□□□□□ -0.65
NFIX-210ENST00000588228 STAB2Q8WWQ8 2551 aa11□□□□□ -0.65
NFIX-210ENST00000588228 GVQW2A0A096LPI5 108 aaPredicted RBP11□□□□□ -0.65
NFIX-210ENST00000588228 ZNF561-AS1K7EIQ3 104 aa11□□□□□ -0.65
NFIX-210ENST00000588228 C10orf25Q5T742 122 aa11□□□□□ -0.65
NFIX-210ENST00000588228 UBE2DNLQ8IWF7 75 aa11□□□□□ -0.65
NFIX-210ENST00000588228 MUC7Q8TAX7 377 aa11□□□□□ -0.65
NFIX-210ENST00000588228 RMI2Q96E14 147 aa11□□□□□ -0.65
NFIX-210ENST00000588228 SND1-IT1Q9HBX3 110 aa11□□□□□ -0.65
NFIX-210ENST00000588228 DYNC2H1Q8NCM8 4307 aaKnown RBP11□□□□□ -0.65
NFIX-210ENST00000588228 LOC107984156A0A0G2JMH3 177 aa10.99□□□□□ -0.65
NFIX-210ENST00000588228 H7C2G1 150 aa10.99□□□□□ -0.65
NFIX-210ENST00000588228 Q1RN00 199 aa10.99□□□□□ -0.65
NFIX-210ENST00000588228 ARL17AQ8IVW1 177 aa10.99□□□□□ -0.65
NFIX-210ENST00000588228 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
NFIX-210ENST00000588228 RPL13AP40429 203 aaKnown RBP10.98□□□□□ -0.65
NFIX-210ENST00000588228 C9orf116Q5BN46 136 aaPredicted RBP10.98□□□□□ -0.65
NFIX-210ENST00000588228 C2orf48Q96LS8 159 aa10.98□□□□□ -0.65
NFIX-210ENST00000588228 F8WDY8 70 aa10.97□□□□□ -0.65
NFIX-210ENST00000588228 PSMB2P49721 201 aa10.97□□□□□ -0.65
NFIX-210ENST00000588228 MEGF8Q7Z7M0 2845 aa10.97□□□□□ -0.65
NFIX-210ENST00000588228 PRKDCP78527 4128 aaKnown RBP10.96□□□□□ -0.65
NFIX-210ENST00000588228 TRBV30A0A0K0K1B3 111 aa10.96□□□□□ -0.65
NFIX-210ENST00000588228 CAMK2N2Q96S95 79 aa10.96□□□□□ -0.65
NFIX-210ENST00000588228 C6orf48Q9UBA6 75 aa10.96□□□□□ -0.65
NFIX-210ENST00000588228 TRAV13-2A0A0B4J235 113 aa10.95□□□□□ -0.66
NFIX-210ENST00000588228 SCGB1C2P0DMR2 95 aa10.95□□□□□ -0.66
NFIX-210ENST00000588228 TRBV20-1A0A075B6N2 111 aa10.94□□□□□ -0.66
NFIX-210ENST00000588228 IGKV2-28A0A075B6P5 120 aa10.94□□□□□ -0.66
NFIX-210ENST00000588228 IGKV2D-28P01615 120 aa10.94□□□□□ -0.66
NFIX-210ENST00000588228 TRIAP1O43715 76 aa10.93□□□□□ -0.66
NFIX-210ENST00000588228 DNAH1Q9P2D7 4330 aa10.92□□□□□ -0.66
NFIX-210ENST00000588228 H3BMG7 143 aa10.92□□□□□ -0.66
NFIX-210ENST00000588228 NDUFC2O95298 119 aa10.92□□□□□ -0.66
NFIX-210ENST00000588228 Q6ZRU5 148 aa10.92□□□□□ -0.66
NFIX-210ENST00000588228 COX6CP09669 75 aa10.91□□□□□ -0.66
NFIX-210ENST00000588228 LINC00337Q8N6G1 96 aa10.91□□□□□ -0.66
NFIX-210ENST00000588228 KRTAP1-5Q9BYS1 174 aa10.91□□□□□ -0.66
NFIX-210ENST00000588228 TCL1BO95988 128 aa10.9□□□□□ -0.66
NFIX-210ENST00000588228 USP17L23D6RBM5 183 aa10.89□□□□□ -0.67
NFIX-210ENST00000588228 CASC10Q5T4H9 136 aa10.89□□□□□ -0.67
NFIX-210ENST00000588228 SYCNQ0VAF6 134 aa10.89□□□□□ -0.67
NFIX-210ENST00000588228 PLECQ15149 4684 aaKnown RBP10.88□□□□□ -0.67
NFIX-210ENST00000588228 F8W1H4 67 aa10.87□□□□□ -0.67
NFIX-210ENST00000588228 TTC32Q5I0X7 151 aa10.87□□□□□ -0.67
NFIX-210ENST00000588228 DNAH7Q8WXX0 4024 aa10.86□□□□□ -0.67
NFIX-210ENST00000588228 NDUFC2-KCTD14E9PQ53 114 aa10.85□□□□□ -0.67
NFIX-210ENST00000588228 RPL28P46779 137 aaKnown RBP10.85□□□□□ -0.67
NFIX-210ENST00000588228 ATXN8Q156A1 80 aa10.85□□□□□ -0.67
NFIX-210ENST00000588228 RNF151Q2KHN1 245 aa10.85□□□□□ -0.67
NFIX-210ENST00000588228 CARD19Q96LW7 228 aa10.85□□□□□ -0.67
NFIX-210ENST00000588228 CSMD3Q7Z407 3707 aa10.84□□□□□ -0.67
NFIX-210ENST00000588228 NBDYA0A0U1RRE5 68 aa10.84□□□□□ -0.67
NFIX-210ENST00000588228 OR13C6PQ8NH95 151 aa10.84□□□□□ -0.67
NFIX-210ENST00000588228 PRO0461Q9UI25 63 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms