RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SMIM9A6NGZ8 99 aa10.21□□□□□ -0.78
CCDC43-203ENST00000588210 Q8NAQ8 132 aa10.21□□□□□ -0.78
CCDC43-203ENST00000588210 STAB2Q8WWQ8 2551 aa10.2□□□□□ -0.78
CCDC43-203ENST00000588210 UBE2L6O14933 153 aa10.2□□□□□ -0.78
CCDC43-203ENST00000588210 TRBV6-4A0A1B0GX49 114 aa10.19□□□□□ -0.78
CCDC43-203ENST00000588210 COX7A2LO14548 114 aa10.19□□□□□ -0.78
CCDC43-203ENST00000588210 MEIG1Q5JSS6 88 aa10.19□□□□□ -0.78
CCDC43-203ENST00000588210 IGHV4-28A0A0C4DH34 117 aa10.19□□□□□ -0.78
CCDC43-203ENST00000588210 SNCGO76070 127 aa10.19□□□□□ -0.78
CCDC43-203ENST00000588210 FAM240AA0A1B0GVK7 77 aa10.18□□□□□ -0.78
CCDC43-203ENST00000588210 A0A0U1RRA0 63 aa10.18□□□□□ -0.78
CCDC43-203ENST00000588210 GAGE7O76087 117 aa10.18□□□□□ -0.78
CCDC43-203ENST00000588210 GAGE12FP0CL80 117 aa10.18□□□□□ -0.78
CCDC43-203ENST00000588210 GAGE12GP0CL81 117 aa10.18□□□□□ -0.78
CCDC43-203ENST00000588210 GAGE12IP0CL82 117 aa10.18□□□□□ -0.78
CCDC43-203ENST00000588210 MUC7Q8TAX7 377 aa10.18□□□□□ -0.78
CCDC43-203ENST00000588210 DNAH7Q8WXX0 4024 aa10.17□□□□□ -0.78
CCDC43-203ENST00000588210 TRGV2A0A075B6R0 118 aa10.17□□□□□ -0.78
CCDC43-203ENST00000588210 Q6Q795 121 aa10.17□□□□□ -0.78
CCDC43-203ENST00000588210 DEFB4AO15263 64 aa10.16□□□□□ -0.78
CCDC43-203ENST00000588210 MRPL23Q16540 153 aaKnown RBP10.16□□□□□ -0.78
CCDC43-203ENST00000588210 LOC100131303A0A0U1RQF7 123 aa10.15□□□□□ -0.78
CCDC43-203ENST00000588210 C3orf84H3BNL1 204 aa10.15□□□□□ -0.78
CCDC43-203ENST00000588210 GAGE2BQ13066 116 aa10.15□□□□□ -0.78
CCDC43-203ENST00000588210 GAGE2EQ4V326 116 aa10.15□□□□□ -0.78
CCDC43-203ENST00000588210 GAGE2DQ9UEU5 116 aa10.15□□□□□ -0.78
CCDC43-203ENST00000588210 FAM222AQ5U5X8 452 aa10.14□□□□□ -0.79
CCDC43-203ENST00000588210 C15orf53Q8NAA6 179 aa10.14□□□□□ -0.79
CCDC43-203ENST00000588210 C11orf45Q8TAV5 145 aa10.14□□□□□ -0.79
CCDC43-203ENST00000588210 COX7B2Q8TF08 81 aa10.14□□□□□ -0.79
CCDC43-203ENST00000588210 ANAPC13Q9BS18 74 aa10.14□□□□□ -0.79
CCDC43-203ENST00000588210 TRAV26-1A0A087WT03 109 aa10.13□□□□□ -0.79
CCDC43-203ENST00000588210 TRGV4A0A0C4DH28 118 aa10.13□□□□□ -0.79
CCDC43-203ENST00000588210 TRACP01848 142 aa10.13□□□□□ -0.79
CCDC43-203ENST00000588210 GAGE6Q13070 117 aa10.12□□□□□ -0.79
CCDC43-203ENST00000588210 FHL2Q14192 279 aa10.12□□□□□ -0.79
CCDC43-203ENST00000588210 TRBV6-8A0A0A6YYG3 113 aa10.11□□□□□ -0.79
CCDC43-203ENST00000588210 SPART-AS1P0CW21 52 aa10.11□□□□□ -0.79
CCDC43-203ENST00000588210 TRAV13-2A0A0B4J235 113 aa10.1□□□□□ -0.79
CCDC43-203ENST00000588210 IGLV4-60A0A075B6I1 120 aa10.1□□□□□ -0.79
CCDC43-203ENST00000588210 IGHV3OR16-9A0A0B4J2B5 98 aa10.1□□□□□ -0.79
CCDC43-203ENST00000588210 NDUFV3P56181 108 aaKnown RBP10.1□□□□□ -0.79
CCDC43-203ENST00000588210 NANOS2P60321 138 aaKnown RBP10.1□□□□□ -0.79
CCDC43-203ENST00000588210 CASC10Q5T4H9 136 aa10.1□□□□□ -0.79
CCDC43-203ENST00000588210 CELA1Q9UNI1 258 aa10.1□□□□□ -0.79
CCDC43-203ENST00000588210 CRPP02741 224 aa10.09□□□□□ -0.79
CCDC43-203ENST00000588210 RPL28P46779 137 aaKnown RBP10.09□□□□□ -0.79
CCDC43-203ENST00000588210 MIR7-3HGQ8N6C7 128 aa10.09□□□□□ -0.79
CCDC43-203ENST00000588210 ACYP1P07311 99 aa10.08□□□□□ -0.8
CCDC43-203ENST00000588210 LYRM9A8MSI8 78 aa10.08□□□□□ -0.8
CCDC43-203ENST00000588210 TTC32Q5I0X7 151 aa10.08□□□□□ -0.8
CCDC43-203ENST00000588210 CHCHD5Q9BSY4 110 aa10.08□□□□□ -0.8
CCDC43-203ENST00000588210 A0A087WZ39 114 aa10.07□□□□□ -0.8
CCDC43-203ENST00000588210 FAM218AQ96MZ4 157 aa10.07□□□□□ -0.8
CCDC43-203ENST00000588210 TOMM7Q9P0U1 55 aa10.07□□□□□ -0.8
CCDC43-203ENST00000588210 STARD9Q9P2P6 4700 aa10.07□□□□□ -0.8
CCDC43-203ENST00000588210 NUPR2A6NF83 97 aa10.06□□□□□ -0.8
CCDC43-203ENST00000588210 LINC00337Q8N6G1 96 aa10.06□□□□□ -0.8
CCDC43-203ENST00000588210 LINC00612Q8N6U2 182 aa10.06□□□□□ -0.8
CCDC43-203ENST00000588210 SND1-IT1Q9HBX3 110 aa10.06□□□□□ -0.8
CCDC43-203ENST00000588210 IGKV2-28A0A075B6P5 120 aa10.06□□□□□ -0.8
CCDC43-203ENST00000588210 IGKV3OR2-268A0A0C4DH90 116 aa10.06□□□□□ -0.8
CCDC43-203ENST00000588210 IBA57-AS1B1ANH7 110 aa10.06□□□□□ -0.8
CCDC43-203ENST00000588210 IGKV2D-28P01615 120 aa10.06□□□□□ -0.8
CCDC43-203ENST00000588210 CSMD3Q7Z407 3707 aa10.06□□□□□ -0.8
CCDC43-203ENST00000588210 TRBV7-7A0A0K0K1E9 115 aa10.05□□□□□ -0.8
CCDC43-203ENST00000588210 Q6ZTC4 211 aa10.05□□□□□ -0.8
CCDC43-203ENST00000588210 BAALC-AS2P0C853 105 aa10.05□□□□□ -0.8
CCDC43-203ENST00000588210 C22orf24Q9Y442 160 aa10.05□□□□□ -0.8
CCDC43-203ENST00000588210 LINC00158P58513 81 aa10.04□□□□□ -0.8
CCDC43-203ENST00000588210 DAD1P61803 113 aa10.04□□□□□ -0.8
CCDC43-203ENST00000588210 TRAV10A0A0B4J240 114 aa10.03□□□□□ -0.8
CCDC43-203ENST00000588210 KLK5Q9Y337 293 aaPredicted RBP10.03□□□□□ -0.8
CCDC43-203ENST00000588210 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
CCDC43-203ENST00000588210 CCL18P55774 89 aa10.03□□□□□ -0.8
CCDC43-203ENST00000588210 DEFB131BA0A096LNP1 70 aa10.02□□□□□ -0.81
CCDC43-203ENST00000588210 DEFB130BP0DP73 79 aa10.02□□□□□ -0.81
CCDC43-203ENST00000588210 DEFB130AP0DP74 79 aa10.02□□□□□ -0.81
CCDC43-203ENST00000588210 C5orf38Q86SI9 138 aa10.02□□□□□ -0.81
CCDC43-203ENST00000588210 SMIM11BQ8TCY0 68 aa10.01□□□□□ -0.81
CCDC43-203ENST00000588210 DYNC2H1Q8NCM8 4307 aaKnown RBP10.01□□□□□ -0.81
CCDC43-203ENST00000588210 INAFM2P0DMQ5 153 aa10□□□□□ -0.81
CCDC43-203ENST00000588210 GYPEP15421 78 aa10□□□□□ -0.81
CCDC43-203ENST00000588210 A0A1B0GUV1 79 aa10□□□□□ -0.81
CCDC43-203ENST00000588210 MALP21145 153 aa10□□□□□ -0.81
CCDC43-203ENST00000588210 SDIM1Q6ZPB5 146 aa10□□□□□ -0.81
CCDC43-203ENST00000588210 H0YGX0 51 aa9.99□□□□□ -0.81
CCDC43-203ENST00000588210 LINC01561Q8N1V8 128 aa9.99□□□□□ -0.81
CCDC43-203ENST00000588210 IMUPQ9GZP8 106 aa9.99□□□□□ -0.81
CCDC43-203ENST00000588210 Q9HAA7 133 aa9.98□□□□□ -0.81
CCDC43-203ENST00000588210 ATP5G1P05496 136 aa9.98□□□□□ -0.81
CCDC43-203ENST00000588210 PFN2P35080 140 aa9.98□□□□□ -0.81
CCDC43-203ENST00000588210 SS18Q15532 418 aa9.98□□□□□ -0.81
CCDC43-203ENST00000588210 LINC00643Q86TS7 51 aa9.98□□□□□ -0.81
CCDC43-203ENST00000588210 Q8IZM0 81 aa9.98□□□□□ -0.81
CCDC43-203ENST00000588210 SMCR5Q8TEV8 140 aa9.98□□□□□ -0.81
CCDC43-203ENST00000588210 A0A087WYN8 130 aa9.97□□□□□ -0.81
CCDC43-203ENST00000588210 PLECQ15149 4684 aaKnown RBP9.97□□□□□ -0.81
CCDC43-203ENST00000588210 DNAL4O96015 105 aa9.97□□□□□ -0.81
CCDC43-203ENST00000588210 HTN3P15516 51 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 301.3 ms