RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PHF5AQ7RTV0 110 aaKnown RBP9.16□□□□□ -0.94
VAPA-209ENST00000585042 TOMM6Q96B49 74 aa9.16□□□□□ -0.94
VAPA-209ENST00000585042 IGLV7-43P04211 117 aa9.15□□□□□ -0.94
VAPA-209ENST00000585042 RAB5BP61020 215 aa9.15□□□□□ -0.94
VAPA-209ENST00000585042 ORAOV1Q8WV07 137 aa9.15□□□□□ -0.94
VAPA-209ENST00000585042 FAM104AQ969W3 186 aa9.15□□□□□ -0.94
VAPA-209ENST00000585042 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.94
VAPA-209ENST00000585042 TIMM17AQ99595 171 aa9.15□□□□□ -0.94
VAPA-209ENST00000585042 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
VAPA-209ENST00000585042 IGIPA6NJ69 53 aa9.14□□□□□ -0.95
VAPA-209ENST00000585042 SEC11AP67812 179 aa9.14□□□□□ -0.95
VAPA-209ENST00000585042 ERASQ7Z444 233 aa9.14□□□□□ -0.95
VAPA-209ENST00000585042 AMELXQ99217 191 aa9.13□□□□□ -0.95
VAPA-209ENST00000585042 A0A087WZ39 114 aa9.12□□□□□ -0.95
VAPA-209ENST00000585042 LINC00614P0C842 121 aa9.12□□□□□ -0.95
VAPA-209ENST00000585042 UBE2D1P51668 147 aa9.12□□□□□ -0.95
VAPA-209ENST00000585042 LINC00242Q5T6M2 205 aa9.12□□□□□ -0.95
VAPA-209ENST00000585042 H0Y9J4 135 aa9.11□□□□□ -0.95
VAPA-209ENST00000585042 UNQ6190/PRO20217Q6UXQ8 127 aa9.11□□□□□ -0.95
VAPA-209ENST00000585042 CBLN2Q8IUK8 224 aa9.11□□□□□ -0.95
VAPA-209ENST00000585042 C18orf32Q8TCD1 76 aa9.11□□□□□ -0.95
VAPA-209ENST00000585042 IGLV1-50A0A075B6I6 118 aa9.1□□□□□ -0.95
VAPA-209ENST00000585042 C10orf25Q5T742 122 aa9.1□□□□□ -0.95
VAPA-209ENST00000585042 YPEL4Q96NS1 127 aa9.1□□□□□ -0.95
VAPA-209ENST00000585042 GEMIN7Q9H840 131 aaKnown RBP9.1□□□□□ -0.95
VAPA-209ENST00000585042 C6orf48Q9UBA6 75 aa9.1□□□□□ -0.95
VAPA-209ENST00000585042 TRBV30A0A0K0K1B3 111 aa9.09□□□□□ -0.95
VAPA-209ENST00000585042 HERVK_113P63121 156 aa9.09□□□□□ -0.95
VAPA-209ENST00000585042 KIAA0087Q14695 138 aa9.09□□□□□ -0.95
VAPA-209ENST00000585042 LINC00173Q6ZV60 143 aa9.09□□□□□ -0.95
VAPA-209ENST00000585042 LINC01561Q8N1V8 128 aa9.09□□□□□ -0.95
VAPA-209ENST00000585042 PRR26Q8N8Z3 221 aa9.09□□□□□ -0.95
VAPA-209ENST00000585042 FAM168BA1KXE4 195 aa9.08□□□□□ -0.96
VAPA-209ENST00000585042 HBDP02042 147 aa9.07□□□□□ -0.96
VAPA-209ENST00000585042 ZC2HC1BQ5TFG8 222 aa9.07□□□□□ -0.96
VAPA-209ENST00000585042 FAM19A3Q7Z5A8 133 aa9.07□□□□□ -0.96
VAPA-209ENST00000585042 NDUFC2-KCTD14E9PQ53 114 aa9.06□□□□□ -0.96
VAPA-209ENST00000585042 PRSS2P07478 247 aa9.06□□□□□ -0.96
VAPA-209ENST00000585042 PMVKQ15126 192 aa9.06□□□□□ -0.96
VAPA-209ENST00000585042 GAGE2EQ4V326 116 aa9.06□□□□□ -0.96
VAPA-209ENST00000585042 FAM19A5Q7Z5A7 132 aaPredicted RBP9.06□□□□□ -0.96
VAPA-209ENST00000585042 KRTAP11-1Q8IUC1 163 aa9.06□□□□□ -0.96
VAPA-209ENST00000585042 PACRGQ96M98 296 aaPredicted RBP9.06□□□□□ -0.96
VAPA-209ENST00000585042 GAGE2DQ9UEU5 116 aa9.06□□□□□ -0.96
VAPA-209ENST00000585042 ATP5LO75964 103 aa9.05□□□□□ -0.96
VAPA-209ENST00000585042 RPL13AP40429 203 aaKnown RBP9.05□□□□□ -0.96
VAPA-209ENST00000585042 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
VAPA-209ENST00000585042 CHCHD1Q96BP2 118 aaKnown RBP9.05□□□□□ -0.96
VAPA-209ENST00000585042 CST9LQ9H4G1 147 aa9.05□□□□□ -0.96
VAPA-209ENST00000585042 TINCRA0A1B0GVN0 87 aa9.04□□□□□ -0.96
VAPA-209ENST00000585042 M0QXV9 152 aa9.04□□□□□ -0.96
VAPA-209ENST00000585042 SCO1O75880 301 aa9.04□□□□□ -0.96
VAPA-209ENST00000585042 KRTAP1-4P0C5Y4 121 aa9.04□□□□□ -0.96
VAPA-209ENST00000585042 NDUFA6P56556 154 aa9.04□□□□□ -0.96
VAPA-209ENST00000585042 UBE2BP63146 152 aa9.04□□□□□ -0.96
VAPA-209ENST00000585042 BAGE3Q86Y29 109 aa9.04□□□□□ -0.96
VAPA-209ENST00000585042 LINC00469Q8N7U9 141 aa9.04□□□□□ -0.96
VAPA-209ENST00000585042 TRGC2P03986 189 aa9.03□□□□□ -0.96
VAPA-209ENST00000585042 URB1-AS1Q96HZ7 61 aa9.03□□□□□ -0.96
VAPA-209ENST00000585042 CKS1BP61024 79 aa9.02□□□□□ -0.97
VAPA-209ENST00000585042 C6orf226Q5I0X4 101 aa9.02□□□□□ -0.97
VAPA-209ENST00000585042 CDKN2A-AS1Q9UH64 79 aa9.02□□□□□ -0.97
VAPA-209ENST00000585042 H3BRM9 83 aa9.01□□□□□ -0.97
VAPA-209ENST00000585042 HSBP1O75506 76 aa9.01□□□□□ -0.97
VAPA-209ENST00000585042 PMCHL1Q16048 86 aa9.01□□□□□ -0.97
VAPA-209ENST00000585042 C9orf129Q5T035 196 aaKnown RBP9.01□□□□□ -0.97
VAPA-209ENST00000585042 C2orf82Q6UX34 121 aa9.01□□□□□ -0.97
VAPA-209ENST00000585042 TOMM7Q9P0U1 55 aa9.01□□□□□ -0.97
VAPA-209ENST00000585042 A0A096LNJ9 63 aa9□□□□□ -0.97
VAPA-209ENST00000585042 COLCA2A8K830 154 aa9□□□□□ -0.97
VAPA-209ENST00000585042 PDZD11Q5EBL8 140 aa9□□□□□ -0.97
VAPA-209ENST00000585042 Q8IZM0 81 aa9□□□□□ -0.97
VAPA-209ENST00000585042 NUPR1O60356 82 aa8.99□□□□□ -0.97
VAPA-209ENST00000585042 ZNF861PO60384 105 aa8.99□□□□□ -0.97
VAPA-209ENST00000585042 IGLV5-45A0A087WSX0 123 aa8.98□□□□□ -0.97
VAPA-209ENST00000585042 CXCL5P42830 114 aa8.98□□□□□ -0.97
VAPA-209ENST00000585042 LBHQ53QV2 105 aaPredicted RBP8.98□□□□□ -0.97
VAPA-209ENST00000585042 IGLC3P0DOY3 106 aa8.97□□□□□ -0.97
VAPA-209ENST00000585042 LPAP08519 4548 aa8.96□□□□□ -0.97
VAPA-209ENST00000585042 IFI27L1Q96BM0 104 aa8.96□□□□□ -0.98
VAPA-209ENST00000585042 TP73-AS1Q9UF72 201 aa8.96□□□□□ -0.98
VAPA-209ENST00000585042 C22orf24Q9Y442 160 aa8.96□□□□□ -0.98
VAPA-209ENST00000585042 SMIM1B2RUZ4 78 aa8.95□□□□□ -0.98
VAPA-209ENST00000585042 F8VRH5 84 aa8.95□□□□□ -0.98
VAPA-209ENST00000585042 COX7B2Q8TF08 81 aa8.95□□□□□ -0.98
VAPA-209ENST00000585042 SPINK8P0C7L1 97 aa8.94□□□□□ -0.98
VAPA-209ENST00000585042 PRR4Q16378 134 aa8.94□□□□□ -0.98
VAPA-209ENST00000585042 CHTOPQ9Y3Y2 248 aaKnown RBP8.94□□□□□ -0.98
VAPA-209ENST00000585042 TRAV12-1A0A0B4J245 112 aa8.93□□□□□ -0.98
VAPA-209ENST00000585042 SERF1AO75920 110 aa8.93□□□□□ -0.98
VAPA-209ENST00000585042 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
VAPA-209ENST00000585042 LEPROTL1O95214 131 aa8.92□□□□□ -0.98
VAPA-209ENST00000585042 TMEM170BQ5T4T1 132 aa8.92□□□□□ -0.98
VAPA-209ENST00000585042 HSPB8Q9UJY1 196 aa8.92□□□□□ -0.98
VAPA-209ENST00000585042 ZNF22P17026 224 aaPredicted RBP8.91□□□□□ -0.98
VAPA-209ENST00000585042 RPL28P46779 137 aaKnown RBP8.91□□□□□ -0.98
VAPA-209ENST00000585042 MRPL55Q7Z7F7 128 aaKnown RBP8.91□□□□□ -0.98
VAPA-209ENST00000585042 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.98
VAPA-209ENST00000585042 C11orf86A6NJI1 115 aa8.89□□□□□ -0.99
VAPA-209ENST00000585042 BCE1O60756 84 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms