RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 PMCHL1Q16048 86 aa3.66□□□□□ -1.82
CDH8-213ENST00000584966 HIST2H2BEQ16778 126 aa3.66□□□□□ -1.82
CDH8-213ENST00000584966 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.66□□□□□ -1.82
CDH8-213ENST00000584966 LINC00242Q5T6M2 205 aa3.66□□□□□ -1.82
CDH8-213ENST00000584966 CD164L2Q6UWJ8 174 aa3.66□□□□□ -1.82
CDH8-213ENST00000584966 ERASQ7Z444 233 aa3.66□□□□□ -1.82
CDH8-213ENST00000584966 SPATA12Q7Z6I5 190 aa3.66□□□□□ -1.82
CDH8-213ENST00000584966 C15orf56Q8N910 161 aa3.66□□□□□ -1.82
CDH8-213ENST00000584966 HIST1H2BHQ93079 126 aa3.66□□□□□ -1.82
CDH8-213ENST00000584966 CHCHD1Q96BP2 118 aaKnown RBP3.66□□□□□ -1.82
CDH8-213ENST00000584966 TMEM141Q96I45 108 aa3.66□□□□□ -1.82
CDH8-213ENST00000584966 HIST1H2BNQ99877 126 aa3.66□□□□□ -1.82
CDH8-213ENST00000584966 HIST1H2BMQ99879 126 aa3.66□□□□□ -1.82
CDH8-213ENST00000584966 TRAV13-1A0A0B4J241 112 aa3.65□□□□□ -1.83
CDH8-213ENST00000584966 C1orf196B1AJZ1 125 aa3.65□□□□□ -1.83
CDH8-213ENST00000584966 G0S2P27469 103 aa3.65□□□□□ -1.83
CDH8-213ENST00000584966 XCL1P47992 114 aa3.65□□□□□ -1.83
CDH8-213ENST00000584966 RAB5BP61020 215 aa3.65□□□□□ -1.83
CDH8-213ENST00000584966 SS18Q15532 418 aa3.65□□□□□ -1.83
CDH8-213ENST00000584966 SCGB3A1Q96QR1 104 aa3.65□□□□□ -1.83
CDH8-213ENST00000584966 LINC01549A6NIU2 74 aa3.64□□□□□ -1.83
CDH8-213ENST00000584966 IFITM10A6NMD0 228 aa3.64□□□□□ -1.83
CDH8-213ENST00000584966 SERF1AO75920 110 aa3.64□□□□□ -1.83
CDH8-213ENST00000584966 HBDP02042 147 aa3.64□□□□□ -1.83
CDH8-213ENST00000584966 KRTAP10-1P60331 282 aa3.64□□□□□ -1.83
CDH8-213ENST00000584966 TEX43Q6ZNM6 134 aa3.64□□□□□ -1.83
CDH8-213ENST00000584966 BAGE3Q86Y29 109 aa3.64□□□□□ -1.83
CDH8-213ENST00000584966 FAM19A2Q8N3H0 131 aa3.64□□□□□ -1.83
CDH8-213ENST00000584966 VCX2Q9H322 139 aa3.64□□□□□ -1.83
CDH8-213ENST00000584966 CST9LQ9H4G1 147 aa3.64□□□□□ -1.83
CDH8-213ENST00000584966 FAT3Q8TDW7 4589 aa3.63□□□□□ -1.83
CDH8-213ENST00000584966 ABCA13Q86UQ4 5058 aa3.63□□□□□ -1.83
CDH8-213ENST00000584966 A0A087WZ39 114 aa3.63□□□□□ -1.83
CDH8-213ENST00000584966 GVQW2A0A096LPI5 108 aaPredicted RBP3.63□□□□□ -1.83
CDH8-213ENST00000584966 IGLV9-49A0A0B4J1Y8 123 aa3.63□□□□□ -1.83
CDH8-213ENST00000584966 A0A0J9YXV3 536 aa3.63□□□□□ -1.83
CDH8-213ENST00000584966 CNBPP62633 177 aaKnown RBP3.63□□□□□ -1.83
CDH8-213ENST00000584966 KIAA0087Q14695 138 aa3.63□□□□□ -1.83
CDH8-213ENST00000584966 PMVKQ15126 192 aa3.63□□□□□ -1.83
CDH8-213ENST00000584966 COA6Q5JTJ3 125 aaKnown RBP3.63□□□□□ -1.83
CDH8-213ENST00000584966 C5orf38Q86SI9 138 aa3.63□□□□□ -1.83
CDH8-213ENST00000584966 IGLV4-69A0A075B6H9 119 aa3.62□□□□□ -1.83
CDH8-213ENST00000584966 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.62□□□□□ -1.83
CDH8-213ENST00000584966 IGHV3-64A0A075B6Q5 118 aa3.62□□□□□ -1.83
CDH8-213ENST00000584966 IGHV1-58A0A0C4DH39 117 aa3.62□□□□□ -1.83
CDH8-213ENST00000584966 TINCRA0A1B0GVN0 87 aa3.62□□□□□ -1.83
CDH8-213ENST00000584966 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.62□□□□□ -1.83
CDH8-213ENST00000584966 COX7A2LO14548 114 aa3.62□□□□□ -1.83
CDH8-213ENST00000584966 LINC01620Q4KN68 170 aa3.62□□□□□ -1.83
CDH8-213ENST00000584966 LINC01561Q8N1V8 128 aa3.62□□□□□ -1.83
CDH8-213ENST00000584966 LINC00526Q96FQ7 95 aa3.62□□□□□ -1.83
CDH8-213ENST00000584966 C16orf90A8MZG2 172 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 HSBP1O75506 76 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 ATP5LO75964 103 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 IGLC3P0DOY3 106 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 XGP55808 180 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 HIGD2BQ4VC39 106 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 C14orf177Q52M58 125 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 Q6ZN92 141 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 C9orf163Q8N9P6 203 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 IFI27L1Q96BM0 104 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 C2orf88Q9BSF0 95 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 CDKN2A-AS1Q9UH64 79 aa3.61□□□□□ -1.83
CDH8-213ENST00000584966 TRAV12-1A0A0B4J245 112 aa3.6□□□□□ -1.83
CDH8-213ENST00000584966 PANO1I0J062 215 aa3.6□□□□□ -1.83
CDH8-213ENST00000584966 LEPROTL1O95214 131 aa3.6□□□□□ -1.83
CDH8-213ENST00000584966 NDUFA6P56556 154 aa3.6□□□□□ -1.83
CDH8-213ENST00000584966 HERVK_113P63121 156 aa3.6□□□□□ -1.83
CDH8-213ENST00000584966 SDIM1Q6ZPB5 146 aa3.6□□□□□ -1.83
CDH8-213ENST00000584966 Q6ZSA8 131 aa3.6□□□□□ -1.83
CDH8-213ENST00000584966 C2orf48Q96LS8 159 aa3.6□□□□□ -1.83
CDH8-213ENST00000584966 SRRM2Q9UQ35 2752 aaKnown RBP3.6□□□□□ -1.83
CDH8-213ENST00000584966 C11orf86A6NJI1 115 aa3.59□□□□□ -1.83
CDH8-213ENST00000584966 SMIM1B2RUZ4 78 aa3.59□□□□□ -1.83
CDH8-213ENST00000584966 CDK2AP2O75956 126 aa3.59□□□□□ -1.83
CDH8-213ENST00000584966 FABP4P15090 132 aa3.59□□□□□ -1.83
CDH8-213ENST00000584966 ZNF22P17026 224 aaPredicted RBP3.59□□□□□ -1.83
CDH8-213ENST00000584966 SEC11AP67812 179 aa3.59□□□□□ -1.83
CDH8-213ENST00000584966 Q6ZRU5 148 aa3.59□□□□□ -1.83
CDH8-213ENST00000584966 OR10D4PQ8NGN7 298 aa3.59□□□□□ -1.83
CDH8-213ENST00000584966 ORAOV1Q8WV07 137 aa3.59□□□□□ -1.83
CDH8-213ENST00000584966 PACRGQ96M98 296 aaPredicted RBP3.59□□□□□ -1.83
CDH8-213ENST00000584966 MRPL35Q9NZE8 188 aaKnown RBP3.59□□□□□ -1.83
CDH8-213ENST00000584966 LRP1Q07954 4544 aaKnown RBP3.58□□□□□ -1.84
CDH8-213ENST00000584966 F8VRH5 84 aa3.58□□□□□ -1.84
CDH8-213ENST00000584966 APOMO95445 188 aa3.58□□□□□ -1.84
CDH8-213ENST00000584966 SPAG11BQ08648 103 aa3.58□□□□□ -1.84
CDH8-213ENST00000584966 SYCNQ0VAF6 134 aa3.58□□□□□ -1.84
CDH8-213ENST00000584966 SRSF9Q13242 221 aaKnown RBP eCLIP3.58□□□□□ -1.84
CDH8-213ENST00000584966 CIRBPQ14011 172 aaKnown RBP3.58□□□□□ -1.84
CDH8-213ENST00000584966 UNQ6190/PRO20217Q6UXQ8 127 aa3.58□□□□□ -1.84
CDH8-213ENST00000584966 CHAC1Q9BUX1 264 aa3.58□□□□□ -1.84
CDH8-213ENST00000584966 GEMIN7Q9H840 131 aaKnown RBP3.58□□□□□ -1.84
CDH8-213ENST00000584966 HSPB8Q9UJY1 196 aa3.58□□□□□ -1.84
CDH8-213ENST00000584966 CHTOPQ9Y3Y2 248 aaKnown RBP3.58□□□□□ -1.84
CDH8-213ENST00000584966 MYCBP2O75592 4640 aa3.58□□□□□ -1.84
CDH8-213ENST00000584966 TMEM223A0PJW6 202 aa3.57□□□□□ -1.84
CDH8-213ENST00000584966 F8WDY8 70 aa3.57□□□□□ -1.84
CDH8-213ENST00000584966 SPINK8P0C7L1 97 aa3.57□□□□□ -1.84
CDH8-213ENST00000584966 C2orf82Q6UX34 121 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms