RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 YPEL4Q96NS1 127 aa8.25□□□□□ -1.09
SREBF1-223ENST00000584760 GEMIN7Q9H840 131 aaKnown RBP8.25□□□□□ -1.09
SREBF1-223ENST00000584760 TRAPPC1Q9Y5R8 145 aa8.25□□□□□ -1.09
SREBF1-223ENST00000584760 IGLV5-45A0A087WSX0 123 aa8.24□□□□□ -1.09
SREBF1-223ENST00000584760 RNF213Q63HN8 5207 aa8.23□□□□□ -1.09
SREBF1-223ENST00000584760 TINCRA0A1B0GVN0 87 aa8.23□□□□□ -1.09
SREBF1-223ENST00000584760 FAM168BA1KXE4 195 aa8.23□□□□□ -1.09
SREBF1-223ENST00000584760 NDUFC2-KCTD14E9PQ53 114 aa8.23□□□□□ -1.09
SREBF1-223ENST00000584760 PRSS2P07478 247 aa8.23□□□□□ -1.09
SREBF1-223ENST00000584760 LINC00469Q8N7U9 141 aa8.23□□□□□ -1.09
SREBF1-223ENST00000584760 PACRGQ96M98 296 aaPredicted RBP8.23□□□□□ -1.09
SREBF1-223ENST00000584760 CST9LQ9H4G1 147 aa8.23□□□□□ -1.09
SREBF1-223ENST00000584760 TOMM7Q9P0U1 55 aa8.23□□□□□ -1.09
SREBF1-223ENST00000584760 SMIM1B2RUZ4 78 aa8.22□□□□□ -1.09
SREBF1-223ENST00000584760 PMVKQ15126 192 aa8.22□□□□□ -1.09
SREBF1-223ENST00000584760 GAGE2EQ4V326 116 aa8.22□□□□□ -1.09
SREBF1-223ENST00000584760 PHF5AQ7RTV0 110 aaKnown RBP8.22□□□□□ -1.09
SREBF1-223ENST00000584760 GAGE2DQ9UEU5 116 aa8.22□□□□□ -1.09
SREBF1-223ENST00000584760 LINC00614P0C842 121 aa8.21□□□□□ -1.1
SREBF1-223ENST00000584760 CKS1BP61024 79 aa8.21□□□□□ -1.1
SREBF1-223ENST00000584760 C6orf226Q5I0X4 101 aa8.21□□□□□ -1.1
SREBF1-223ENST00000584760 KRTAP7-1Q8IUC3 87 aa8.21□□□□□ -1.1
SREBF1-223ENST00000584760 PSORS1C2Q9UIG4 136 aa8.21□□□□□ -1.1
SREBF1-223ENST00000584760 TNXBP22105 4242 aa8.21□□□□□ -1.1
SREBF1-223ENST00000584760 HBDP02042 147 aa8.2□□□□□ -1.1
SREBF1-223ENST00000584760 PDZD11Q5EBL8 140 aa8.2□□□□□ -1.1
SREBF1-223ENST00000584760 C9orf129Q5T035 196 aaKnown RBP8.2□□□□□ -1.1
SREBF1-223ENST00000584760 SPINK6Q6UWN8 80 aa8.2□□□□□ -1.1
SREBF1-223ENST00000584760 FAM19A5Q7Z5A7 132 aaPredicted RBP8.2□□□□□ -1.1
SREBF1-223ENST00000584760 LRP2P98164 4655 aa8.19□□□□□ -1.1
SREBF1-223ENST00000584760 F8VRH5 84 aa8.19□□□□□ -1.1
SREBF1-223ENST00000584760 CXCL5P42830 114 aa8.19□□□□□ -1.1
SREBF1-223ENST00000584760 SRSF9Q13242 221 aaKnown RBP eCLIP8.19□□□□□ -1.1
SREBF1-223ENST00000584760 PMCHL1Q16048 86 aa8.19□□□□□ -1.1
SREBF1-223ENST00000584760 IGLC3P0DOY3 106 aa8.18□□□□□ -1.1
SREBF1-223ENST00000584760 KRTAP11-1Q8IUC1 163 aa8.18□□□□□ -1.1
SREBF1-223ENST00000584760 M0QXV9 152 aa8.17□□□□□ -1.1
SREBF1-223ENST00000584760 SPINK8P0C7L1 97 aa8.17□□□□□ -1.1
SREBF1-223ENST00000584760 RAB5BP61020 215 aa8.17□□□□□ -1.1
SREBF1-223ENST00000584760 ODF1Q14990 250 aa8.17□□□□□ -1.1
SREBF1-223ENST00000584760 CBLN2Q8IUK8 224 aa8.17□□□□□ -1.1
SREBF1-223ENST00000584760 COX7B2Q8TF08 81 aa8.17□□□□□ -1.1
SREBF1-223ENST00000584760 LINC01600Q96MT4 127 aa8.16□□□□□ -1.1
SREBF1-223ENST00000584760 ATP5LO75964 103 aa8.15□□□□□ -1.1
SREBF1-223ENST00000584760 C1orf137Q5JT78 98 aa8.15□□□□□ -1.1
SREBF1-223ENST00000584760 IGLV5-39A0A0G2JS06 123 aa8.14□□□□□ -1.11
SREBF1-223ENST00000584760 H3BRM9 83 aa8.14□□□□□ -1.11
SREBF1-223ENST00000584760 ZNF22P17026 224 aaPredicted RBP8.14□□□□□ -1.11
SREBF1-223ENST00000584760 NDUFA6P56556 154 aa8.14□□□□□ -1.11
SREBF1-223ENST00000584760 SLC7A5P1Q8MH63 180 aa8.14□□□□□ -1.11
SREBF1-223ENST00000584760 CHCHD1Q96BP2 118 aaKnown RBP8.14□□□□□ -1.11
SREBF1-223ENST00000584760 XAGE1AQ9HD64 81 aa8.14□□□□□ -1.11
SREBF1-223ENST00000584760 REG3GQ6UW15 175 aa8.13□□□□□ -1.11
SREBF1-223ENST00000584760 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
SREBF1-223ENST00000584760 C11orf86A6NJI1 115 aa8.11□□□□□ -1.11
SREBF1-223ENST00000584760 UBE2BP63146 152 aa8.11□□□□□ -1.11
SREBF1-223ENST00000584760 BAGE3Q86Y29 109 aa8.11□□□□□ -1.11
SREBF1-223ENST00000584760 C22orf24Q9Y442 160 aa8.1□□□□□ -1.11
SREBF1-223ENST00000584760 TRGC2P03986 189 aa8.09□□□□□ -1.11
SREBF1-223ENST00000584760 KRTAP10-8P60410 259 aa8.09□□□□□ -1.11
SREBF1-223ENST00000584760 IFI27L1Q96BM0 104 aa8.09□□□□□ -1.11
SREBF1-223ENST00000584760 TP73-AS1Q9UF72 201 aa8.09□□□□□ -1.11
SREBF1-223ENST00000584760 LINC00310P59036 64 aa8.08□□□□□ -1.12
SREBF1-223ENST00000584760 TMEM170BQ5T4T1 132 aa8.08□□□□□ -1.12
SREBF1-223ENST00000584760 CHTOPQ9Y3Y2 248 aaKnown RBP8.08□□□□□ -1.12
SREBF1-223ENST00000584760 TRAV12-1A0A0B4J245 112 aa8.07□□□□□ -1.12
SREBF1-223ENST00000584760 H0Y9J4 135 aa8.07□□□□□ -1.12
SREBF1-223ENST00000584760 HSBP1O75506 76 aa8.07□□□□□ -1.12
SREBF1-223ENST00000584760 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
SREBF1-223ENST00000584760 FAM19A2Q8N3H0 131 aa8.07□□□□□ -1.12
SREBF1-223ENST00000584760 DIRC1Q969H9 104 aa8.07□□□□□ -1.12
SREBF1-223ENST00000584760 LBHQ53QV2 105 aaPredicted RBP8.06□□□□□ -1.12
SREBF1-223ENST00000584760 IGLV5-37A0A075B6J1 123 aa8.05□□□□□ -1.12
SREBF1-223ENST00000584760 COLCA2A8K830 154 aa8.05□□□□□ -1.12
SREBF1-223ENST00000584760 ZNF625Q96I27 306 aaPredicted RBP8.05□□□□□ -1.12
SREBF1-223ENST00000584760 ERG28Q9UKR5 140 aa8.05□□□□□ -1.12
SREBF1-223ENST00000584760 TMEM223A0PJW6 202 aa8.04□□□□□ -1.12
SREBF1-223ENST00000584760 NUPR1O60356 82 aa8.04□□□□□ -1.12
SREBF1-223ENST00000584760 SERF1AO75920 110 aa8.04□□□□□ -1.12
SREBF1-223ENST00000584760 PFN2P35080 140 aa8.04□□□□□ -1.12
SREBF1-223ENST00000584760 SFTA2Q6UW10 78 aa8.04□□□□□ -1.12
SREBF1-223ENST00000584760 COX17Q14061 63 aa8.03□□□□□ -1.12
SREBF1-223ENST00000584760 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
SREBF1-223ENST00000584760 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
SREBF1-223ENST00000584760 SND1-IT1Q9HBX3 110 aa8.02□□□□□ -1.13
SREBF1-223ENST00000584760 ZNF861PO60384 105 aa8.01□□□□□ -1.13
SREBF1-223ENST00000584760 GAGE10A6NGK3 116 aa8□□□□□ -1.13
SREBF1-223ENST00000584760 RPL37AP8A6NKH3 93 aa8□□□□□ -1.13
SREBF1-223ENST00000584760 BCE1O60756 84 aa8□□□□□ -1.13
SREBF1-223ENST00000584760 LEPROTL1O95214 131 aa8□□□□□ -1.13
SREBF1-223ENST00000584760 VPREB1P12018 145 aa8□□□□□ -1.13
SREBF1-223ENST00000584760 NKAPP1Q8N9T2 125 aa8□□□□□ -1.13
SREBF1-223ENST00000584760 SCO1O75880 301 aa7.99□□□□□ -1.13
SREBF1-223ENST00000584760 PRR26Q8N8Z3 221 aa7.99□□□□□ -1.13
SREBF1-223ENST00000584760 Q8NDZ9 215 aa7.99□□□□□ -1.13
SREBF1-223ENST00000584760 H0Y8G0 127 aa7.98□□□□□ -1.13
SREBF1-223ENST00000584760 HSPB8Q9UJY1 196 aa7.98□□□□□ -1.13
SREBF1-223ENST00000584760 IGLV1-50A0A075B6I6 118 aa7.97□□□□□ -1.13
SREBF1-223ENST00000584760 RPL28P46779 137 aaKnown RBP7.96□□□□□ -1.14
SREBF1-223ENST00000584760 KRTAP13-1Q8IUC0 172 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms