RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 RMI2Q96E14 147 aa9.31□□□□□ -0.92
UBBP4-202ENST00000584755 Q9HAA7 133 aa9.31□□□□□ -0.92
UBBP4-202ENST00000584755 SPANXDQ9BXN6 97 aa9.3□□□□□ -0.92
UBBP4-202ENST00000584755 SPANXCQ9NY87 97 aa9.3□□□□□ -0.92
UBBP4-202ENST00000584755 SRSF9Q13242 221 aaKnown RBP eCLIP9.29□□□□□ -0.92
UBBP4-202ENST00000584755 ADAMTSL4-AS1Q5T5F5 129 aa9.29□□□□□ -0.92
UBBP4-202ENST00000584755 Q6ZVH6 145 aa9.29□□□□□ -0.92
UBBP4-202ENST00000584755 C15orf56Q8N910 161 aa9.29□□□□□ -0.92
UBBP4-202ENST00000584755 GCSHP23434 173 aa9.28□□□□□ -0.92
UBBP4-202ENST00000584755 FXYD2P54710 66 aa9.28□□□□□ -0.92
UBBP4-202ENST00000584755 SPAG11BQ08648 103 aa9.28□□□□□ -0.92
UBBP4-202ENST00000584755 CIRBPQ14011 172 aaKnown RBP9.28□□□□□ -0.92
UBBP4-202ENST00000584755 BATFQ16520 125 aa9.28□□□□□ -0.92
UBBP4-202ENST00000584755 C21orf62-AS1Q17RA5 79 aa9.28□□□□□ -0.92
UBBP4-202ENST00000584755 CFAP161Q6P656 301 aa9.28□□□□□ -0.92
UBBP4-202ENST00000584755 COX11Q9Y6N1 276 aa9.28□□□□□ -0.92
UBBP4-202ENST00000584755 TTC32Q5I0X7 151 aa9.28□□□□□ -0.92
UBBP4-202ENST00000584755 NBDYA0A0U1RRE5 68 aa9.27□□□□□ -0.93
UBBP4-202ENST00000584755 PTTG1IPP53801 180 aa9.27□□□□□ -0.93
UBBP4-202ENST00000584755 CKS1BP61024 79 aa9.27□□□□□ -0.93
UBBP4-202ENST00000584755 C2orf82Q6UX34 121 aa9.27□□□□□ -0.93
UBBP4-202ENST00000584755 NTN5Q8WTR8 489 aaPredicted RBP9.27□□□□□ -0.93
UBBP4-202ENST00000584755 GVQW2A0A096LPI5 108 aaPredicted RBP9.26□□□□□ -0.93
UBBP4-202ENST00000584755 MEIG1Q5JSS6 88 aa9.26□□□□□ -0.93
UBBP4-202ENST00000584755 COL5A1-AS1Q5SY13 56 aa9.26□□□□□ -0.93
UBBP4-202ENST00000584755 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
UBBP4-202ENST00000584755 SMIM13P0DJ93 91 aa9.25□□□□□ -0.93
UBBP4-202ENST00000584755 IFITM1P13164 125 aa9.25□□□□□ -0.93
UBBP4-202ENST00000584755 CASC10Q5T4H9 136 aa9.25□□□□□ -0.93
UBBP4-202ENST00000584755 C6orf223Q8N319 242 aa9.25□□□□□ -0.93
UBBP4-202ENST00000584755 C2orf48Q96LS8 159 aa9.25□□□□□ -0.93
UBBP4-202ENST00000584755 ERG28Q9UKR5 140 aa9.25□□□□□ -0.93
UBBP4-202ENST00000584755 F8WDY8 70 aa9.24□□□□□ -0.93
UBBP4-202ENST00000584755 C3orf84H3BNL1 204 aa9.24□□□□□ -0.93
UBBP4-202ENST00000584755 MUSTN1Q8IVN3 82 aa9.24□□□□□ -0.93
UBBP4-202ENST00000584755 A0A1B0GWB2 263 aa9.23□□□□□ -0.93
UBBP4-202ENST00000584755 A6NDN8 102 aa9.23□□□□□ -0.93
UBBP4-202ENST00000584755 COX17Q14061 63 aa9.23□□□□□ -0.93
UBBP4-202ENST00000584755 LINC00526Q96FQ7 95 aa9.23□□□□□ -0.93
UBBP4-202ENST00000584755 A6NJY4 79 aa9.22□□□□□ -0.93
UBBP4-202ENST00000584755 ZNF561-AS1K7EIQ3 104 aa9.22□□□□□ -0.93
UBBP4-202ENST00000584755 C10orf25Q5T742 122 aa9.22□□□□□ -0.93
UBBP4-202ENST00000584755 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
UBBP4-202ENST00000584755 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
UBBP4-202ENST00000584755 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.93
UBBP4-202ENST00000584755 HIGD2BQ4VC39 106 aa9.21□□□□□ -0.93
UBBP4-202ENST00000584755 DAND5Q8N907 189 aa9.21□□□□□ -0.93
UBBP4-202ENST00000584755 DNAH10Q8IVF4 4471 aa9.21□□□□□ -0.94
UBBP4-202ENST00000584755 TRBV30A0A0K0K1B3 111 aa9.21□□□□□ -0.94
UBBP4-202ENST00000584755 A0A0U1RRA0 63 aa9.21□□□□□ -0.94
UBBP4-202ENST00000584755 USP17L23D6RBM5 183 aa9.21□□□□□ -0.94
UBBP4-202ENST00000584755 EIF4EBP3O60516 100 aaPredicted RBP9.21□□□□□ -0.94
UBBP4-202ENST00000584755 SOSTDC1Q6X4U4 206 aa9.21□□□□□ -0.94
UBBP4-202ENST00000584755 MIR7-3HGQ8N6C7 128 aa9.21□□□□□ -0.94
UBBP4-202ENST00000584755 COPS9Q8WXC6 57 aa9.21□□□□□ -0.94
UBBP4-202ENST00000584755 NHP2Q9NX24 153 aaKnown RBP9.21□□□□□ -0.94
UBBP4-202ENST00000584755 ALMS1Q8TCU4 4167 aa9.2□□□□□ -0.94
UBBP4-202ENST00000584755 DNAH6Q9C0G6 4158 aa9.2□□□□□ -0.94
UBBP4-202ENST00000584755 A4D1N5 150 aa9.2□□□□□ -0.94
UBBP4-202ENST00000584755 LINC00158P58513 81 aa9.2□□□□□ -0.94
UBBP4-202ENST00000584755 C6orf48Q9UBA6 75 aa9.2□□□□□ -0.94
UBBP4-202ENST00000584755 TAX1BP3O14907 124 aa9.19□□□□□ -0.94
UBBP4-202ENST00000584755 PFN2P35080 140 aa9.19□□□□□ -0.94
UBBP4-202ENST00000584755 Q6ZR54 194 aa9.19□□□□□ -0.94
UBBP4-202ENST00000584755 Q6ZRN7 208 aaPredicted RBP9.19□□□□□ -0.94
UBBP4-202ENST00000584755 CAMK2N2Q96S95 79 aa9.19□□□□□ -0.94
UBBP4-202ENST00000584755 LOC107984156A0A0G2JMH3 177 aa9.18□□□□□ -0.94
UBBP4-202ENST00000584755 C9orf116Q5BN46 136 aaPredicted RBP9.18□□□□□ -0.94
UBBP4-202ENST00000584755 ARL17AQ8IVW1 177 aa9.18□□□□□ -0.94
UBBP4-202ENST00000584755 LINC00476Q8WZB0 136 aa9.18□□□□□ -0.94
UBBP4-202ENST00000584755 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.17□□□□□ -0.94
UBBP4-202ENST00000584755 CFC1BP0CG36 223 aa9.17□□□□□ -0.94
UBBP4-202ENST00000584755 CFC1P0CG37 223 aa9.17□□□□□ -0.94
UBBP4-202ENST00000584755 NPC2P61916 151 aa9.17□□□□□ -0.94
UBBP4-202ENST00000584755 Q6ZRU5 148 aa9.17□□□□□ -0.94
UBBP4-202ENST00000584755 KMT2AQ03164 3969 aa9.17□□□□□ -0.94
UBBP4-202ENST00000584755 A0A0B4J2C4 111 aa9.16□□□□□ -0.94
UBBP4-202ENST00000584755 K7ERJ3 54 aa9.16□□□□□ -0.94
UBBP4-202ENST00000584755 SLPIP03973 132 aa9.15□□□□□ -0.94
UBBP4-202ENST00000584755 SYCNQ0VAF6 134 aa9.15□□□□□ -0.94
UBBP4-202ENST00000584755 RNF151Q2KHN1 245 aa9.15□□□□□ -0.94
UBBP4-202ENST00000584755 PSCAO43653 123 aa9.15□□□□□ -0.95
UBBP4-202ENST00000584755 WFDC2Q14508 124 aa9.15□□□□□ -0.95
UBBP4-202ENST00000584755 M0R2N4 97 aa9.14□□□□□ -0.95
UBBP4-202ENST00000584755 LECT2O14960 151 aa9.14□□□□□ -0.95
UBBP4-202ENST00000584755 DNAH2Q9P225 4427 aa9.14□□□□□ -0.95
UBBP4-202ENST00000584755 LRCOL1A6NCL2 159 aa9.13□□□□□ -0.95
UBBP4-202ENST00000584755 LY6G6CO95867 125 aa9.13□□□□□ -0.95
UBBP4-202ENST00000584755 CARD19Q96LW7 228 aa9.13□□□□□ -0.95
UBBP4-202ENST00000584755 SND1-IT1Q9HBX3 110 aa9.13□□□□□ -0.95
UBBP4-202ENST00000584755 C9orf118A6NHY6 69 aa9.12□□□□□ -0.95
UBBP4-202ENST00000584755 TLX1NBP0CAT3 122 aa9.12□□□□□ -0.95
UBBP4-202ENST00000584755 C14orf177Q52M58 125 aa9.12□□□□□ -0.95
UBBP4-202ENST00000584755 RAB37Q96AX2 223 aa9.12□□□□□ -0.95
UBBP4-202ENST00000584755 PRO1854Q9UHT4 67 aa9.12□□□□□ -0.95
UBBP4-202ENST00000584755 NDUFC2-KCTD14E9PQ53 114 aa9.11□□□□□ -0.95
UBBP4-202ENST00000584755 CNBPP62633 177 aaKnown RBP9.11□□□□□ -0.95
UBBP4-202ENST00000584755 NDUFC2O95298 119 aa9.09□□□□□ -0.95
UBBP4-202ENST00000584755 IGKV2-28A0A075B6P5 120 aa9.08□□□□□ -0.96
UBBP4-202ENST00000584755 TSPAN13O95857 204 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms