RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 GEMIN7Q9H840 131 aaKnown RBP6.36□□□□□ -1.39
GGA3-219ENST00000584550 PLAC8Q9NZF1 115 aa6.36□□□□□ -1.39
GGA3-219ENST00000584550 A0A087WZ39 114 aa6.35□□□□□ -1.39
GGA3-219ENST00000584550 LINC01549A6NIU2 74 aa6.35□□□□□ -1.39
GGA3-219ENST00000584550 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.35□□□□□ -1.39
GGA3-219ENST00000584550 OR10D4PQ8NGN7 298 aa6.35□□□□□ -1.39
GGA3-219ENST00000584550 A0A096LNJ9 63 aa6.34□□□□□ -1.39
GGA3-219ENST00000584550 HBDP02042 147 aa6.34□□□□□ -1.39
GGA3-219ENST00000584550 SNRPEP62304 92 aaKnown RBP6.34□□□□□ -1.39
GGA3-219ENST00000584550 MAJINQ3KP22 176 aa6.34□□□□□ -1.39
GGA3-219ENST00000584550 SPINK6Q6UWN8 80 aa6.34□□□□□ -1.39
GGA3-219ENST00000584550 BAGE3Q86Y29 109 aa6.34□□□□□ -1.39
GGA3-219ENST00000584550 C2orf48Q96LS8 159 aa6.34□□□□□ -1.39
GGA3-219ENST00000584550 CST9LQ9H4G1 147 aa6.34□□□□□ -1.39
GGA3-219ENST00000584550 TOMM7Q9P0U1 55 aa6.34□□□□□ -1.39
GGA3-219ENST00000584550 A0A096LNI7 61 aa6.33□□□□□ -1.4
GGA3-219ENST00000584550 HERVK_113P63121 156 aa6.33□□□□□ -1.4
GGA3-219ENST00000584550 SEC11AP67812 179 aa6.33□□□□□ -1.4
GGA3-219ENST00000584550 GAGE2BQ13066 116 aa6.33□□□□□ -1.4
GGA3-219ENST00000584550 PMVKQ15126 192 aa6.33□□□□□ -1.4
GGA3-219ENST00000584550 UNQ6190/PRO20217Q6UXQ8 127 aa6.33□□□□□ -1.4
GGA3-219ENST00000584550 LINC00469Q8N7U9 141 aa6.33□□□□□ -1.4
GGA3-219ENST00000584550 CDKN2A-AS1Q9UH64 79 aa6.33□□□□□ -1.4
GGA3-219ENST00000584550 NDUFA1O15239 70 aa6.32□□□□□ -1.4
GGA3-219ENST00000584550 PRSS2P07478 247 aa6.32□□□□□ -1.4
GGA3-219ENST00000584550 C10orf25Q5T742 122 aa6.32□□□□□ -1.4
GGA3-219ENST00000584550 FAM19A3Q7Z5A8 133 aa6.32□□□□□ -1.4
GGA3-219ENST00000584550 STPG4Q8N801 248 aa6.32□□□□□ -1.4
GGA3-219ENST00000584550 CHCHD1Q96BP2 118 aaKnown RBP6.32□□□□□ -1.4
GGA3-219ENST00000584550 PACRGQ96M98 296 aaPredicted RBP6.32□□□□□ -1.4
GGA3-219ENST00000584550 LOC107984640A0A0U1RRK4 108 aa6.31□□□□□ -1.4
GGA3-219ENST00000584550 TINCRA0A1B0GVN0 87 aa6.31□□□□□ -1.4
GGA3-219ENST00000584550 HSBP1O75506 76 aa6.31□□□□□ -1.4
GGA3-219ENST00000584550 RPL18AQ02543 176 aaKnown RBP6.31□□□□□ -1.4
GGA3-219ENST00000584550 KIAA0087Q14695 138 aa6.31□□□□□ -1.4
GGA3-219ENST00000584550 PDZD11Q5EBL8 140 aa6.31□□□□□ -1.4
GGA3-219ENST00000584550 C6orf226Q5I0X4 101 aa6.31□□□□□ -1.4
GGA3-219ENST00000584550 C2orf82Q6UX34 121 aa6.31□□□□□ -1.4
GGA3-219ENST00000584550 PKIGQ9Y2B9 76 aa6.31□□□□□ -1.4
GGA3-219ENST00000584550 A0A0U1RQV1 116 aa6.3□□□□□ -1.4
GGA3-219ENST00000584550 ATP5LO75964 103 aa6.3□□□□□ -1.4
GGA3-219ENST00000584550 CKS1BP61024 79 aa6.3□□□□□ -1.4
GGA3-219ENST00000584550 SRSF9Q13242 221 aaKnown RBP eCLIP6.3□□□□□ -1.4
GGA3-219ENST00000584550 LINC01561Q8N1V8 128 aa6.3□□□□□ -1.4
GGA3-219ENST00000584550 FAM19A2Q8N3H0 131 aa6.3□□□□□ -1.4
GGA3-219ENST00000584550 C6orf48Q9UBA6 75 aa6.3□□□□□ -1.4
GGA3-219ENST00000584550 LINC00587B1AMM8 73 aa6.29□□□□□ -1.4
GGA3-219ENST00000584550 F8WDY8 70 aa6.29□□□□□ -1.4
GGA3-219ENST00000584550 SERF1AO75920 110 aa6.29□□□□□ -1.4
GGA3-219ENST00000584550 SPINK8P0C7L1 97 aa6.29□□□□□ -1.4
GGA3-219ENST00000584550 S100A2P29034 98 aa6.29□□□□□ -1.4
GGA3-219ENST00000584550 PTTG1IPP53801 180 aa6.29□□□□□ -1.4
GGA3-219ENST00000584550 MRPL35Q9NZE8 188 aaKnown RBP6.29□□□□□ -1.4
GGA3-219ENST00000584550 LINC00474Q9P2X8 69 aa6.29□□□□□ -1.4
GGA3-219ENST00000584550 RNF151Q2KHN1 245 aa6.28□□□□□ -1.4
GGA3-219ENST00000584550 C9orf116Q5BN46 136 aaPredicted RBP6.28□□□□□ -1.4
GGA3-219ENST00000584550 IFI27L1Q96BM0 104 aa6.28□□□□□ -1.4
GGA3-219ENST00000584550 IGLV5-45A0A087WSX0 123 aa6.27□□□□□ -1.41
GGA3-219ENST00000584550 SMIM1B2RUZ4 78 aa6.27□□□□□ -1.41
GGA3-219ENST00000584550 H0Y8G0 127 aa6.27□□□□□ -1.41
GGA3-219ENST00000584550 H3BRM9 83 aa6.27□□□□□ -1.41
GGA3-219ENST00000584550 IGLC3P0DOY3 106 aa6.27□□□□□ -1.41
GGA3-219ENST00000584550 GAGE2EQ4V326 116 aa6.27□□□□□ -1.41
GGA3-219ENST00000584550 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
GGA3-219ENST00000584550 Q8IZM0 81 aa6.27□□□□□ -1.41
GGA3-219ENST00000584550 COX7B2Q8TF08 81 aa6.27□□□□□ -1.41
GGA3-219ENST00000584550 GAGE2DQ9UEU5 116 aa6.27□□□□□ -1.41
GGA3-219ENST00000584550 CHTOPQ9Y3Y2 248 aaKnown RBP6.27□□□□□ -1.41
GGA3-219ENST00000584550 TRBV30A0A0K0K1B3 111 aa6.26□□□□□ -1.41
GGA3-219ENST00000584550 C11orf86A6NJI1 115 aa6.26□□□□□ -1.41
GGA3-219ENST00000584550 NUPR1O60356 82 aa6.26□□□□□ -1.41
GGA3-219ENST00000584550 FABP4P15090 132 aa6.26□□□□□ -1.41
GGA3-219ENST00000584550 LINC00310P59036 64 aa6.26□□□□□ -1.41
GGA3-219ENST00000584550 Q6ZRP5 223 aa6.26□□□□□ -1.41
GGA3-219ENST00000584550 ZNF22P17026 224 aaPredicted RBP6.25□□□□□ -1.41
GGA3-219ENST00000584550 PRR4Q16378 134 aa6.25□□□□□ -1.41
GGA3-219ENST00000584550 TMEM170BQ5T4T1 132 aa6.25□□□□□ -1.41
GGA3-219ENST00000584550 A0A1W2PNN7 141 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 F8VRH5 84 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST1H2BKO60814 126 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 LEPROTL1O95214 131 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST1H2BJP06899 126 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST1H2BOP23527 126 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST1H2BBP33778 126 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST1H2BDP58876 126 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST1H2BCP62807 126 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST2H2BEQ16778 126 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST3H2BBQ8N257 126 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST1H2BHQ93079 126 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST1H2BNQ99877 126 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 HIST1H2BMQ99879 126 aa6.24□□□□□ -1.41
GGA3-219ENST00000584550 TRAV12-1A0A0B4J245 112 aa6.23□□□□□ -1.41
GGA3-219ENST00000584550 FAM168BA1KXE4 195 aa6.23□□□□□ -1.41
GGA3-219ENST00000584550 NDUFC2-KCTD14E9PQ53 114 aa6.23□□□□□ -1.41
GGA3-219ENST00000584550 TLX1NBP0CAT3 122 aa6.23□□□□□ -1.41
GGA3-219ENST00000584550 CXCL5P42830 114 aa6.23□□□□□ -1.41
GGA3-219ENST00000584550 LBHQ53QV2 105 aaPredicted RBP6.23□□□□□ -1.41
GGA3-219ENST00000584550 PRR26Q8N8Z3 221 aa6.23□□□□□ -1.41
GGA3-219ENST00000584550 PYY3Q5JQD4 70 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms